RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 TYRO3Q06418 890 aa7.85□□□□□ -1.15
SMG6-217ENST00000575338 SLC39A14Q15043 492 aa7.85□□□□□ -1.15
SMG6-217ENST00000575338 C12orf60Q5U649 245 aa7.85□□□□□ -1.15
SMG6-217ENST00000575338 ZSCAN30Q86W11 494 aa7.85□□□□□ -1.15
SMG6-217ENST00000575338 NOSTRINQ8IVI9 506 aa7.85□□□□□ -1.15
SMG6-217ENST00000575338 CRACR2BQ8N4Y2 399 aaPredicted RBP7.85□□□□□ -1.15
SMG6-217ENST00000575338 ENAHQ8N8S7 591 aaPredicted RBP7.85□□□□□ -1.15
SMG6-217ENST00000575338 FSIP1Q8NA03 581 aa7.85□□□□□ -1.15
SMG6-217ENST00000575338 RNF214Q8ND24 703 aa7.85□□□□□ -1.15
SMG6-217ENST00000575338 TBC1D16Q8TBP0 767 aa7.85□□□□□ -1.15
SMG6-217ENST00000575338 MASTLQ96GX5 879 aa7.85□□□□□ -1.15
SMG6-217ENST00000575338 PGBD1Q96JS3 809 aa7.85□□□□□ -1.15
SMG6-217ENST00000575338 SDF4Q9BRK5 362 aa7.85□□□□□ -1.15
SMG6-217ENST00000575338 PYM1Q9BRP8 204 aaKnown RBP7.85□□□□□ -1.15
SMG6-217ENST00000575338 ZC3H12CQ9C0D7 883 aaKnown RBP7.85□□□□□ -1.15
SMG6-217ENST00000575338 KAT14Q9H8E8 782 aa7.85□□□□□ -1.15
SMG6-217ENST00000575338 GPHNQ9NQX3 736 aaPredicted RBP7.85□□□□□ -1.15
SMG6-217ENST00000575338 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.85□□□□□ -1.15
SMG6-217ENST00000575338 TCP11L1Q9NUJ3 509 aa7.85□□□□□ -1.15
SMG6-217ENST00000575338 USP25Q9UHP3 1055 aa7.85□□□□□ -1.15
SMG6-217ENST00000575338 COL11A2P13942 1736 aaPredicted RBP7.84□□□□□ -1.15
SMG6-217ENST00000575338 GPR75-ASB3A0A0A6YYF3 556 aa7.84□□□□□ -1.15
SMG6-217ENST00000575338 NR1I2O75469 434 aa7.84□□□□□ -1.15
SMG6-217ENST00000575338 TSPY3P0CV98 308 aa7.84□□□□□ -1.15
SMG6-217ENST00000575338 TSPY8P0CW00 308 aa7.84□□□□□ -1.15
SMG6-217ENST00000575338 KLRK1P26718 216 aa7.84□□□□□ -1.15
SMG6-217ENST00000575338 CALML3P27482 149 aa7.84□□□□□ -1.15
SMG6-217ENST00000575338 CLCN1P35523 988 aa7.84□□□□□ -1.15
SMG6-217ENST00000575338 KRT2P35908 639 aa7.84□□□□□ -1.15
SMG6-217ENST00000575338 CEBPZQ03701 1054 aaKnown RBP7.84□□□□□ -1.15
SMG6-217ENST00000575338 KIAA2012Q0VF49 1180 aa7.84□□□□□ -1.15
SMG6-217ENST00000575338 MFSD14BQ5SR56 506 aa7.84□□□□□ -1.15
SMG6-217ENST00000575338 CC2D2BQ6DHV5 1058 aa7.84□□□□□ -1.15
SMG6-217ENST00000575338 GALNT17Q6IS24 598 aa7.84□□□□□ -1.15
SMG6-217ENST00000575338 KANK3Q6NY19 840 aa7.84□□□□□ -1.15
SMG6-217ENST00000575338 POTEAQ6S8J7 498 aa7.84□□□□□ -1.15
SMG6-217ENST00000575338 AMIGO3Q86WK7 504 aa7.84□□□□□ -1.15
SMG6-217ENST00000575338 CCDC144CPQ8IYA2 1237 aa7.84□□□□□ -1.15
SMG6-217ENST00000575338 ELOA2Q8IYF1 753 aaPredicted RBP7.84□□□□□ -1.15
SMG6-217ENST00000575338 CCDC24Q8N4L8 307 aa7.84□□□□□ -1.15
SMG6-217ENST00000575338 MPNDQ8N594 471 aa7.84□□□□□ -1.15
SMG6-217ENST00000575338 CCDC148Q8NFR7 591 aa7.84□□□□□ -1.15
SMG6-217ENST00000575338 CCDC12Q8WUD4 166 aaPredicted RBP7.84□□□□□ -1.15
SMG6-217ENST00000575338 ANKS1AQ92625 1134 aa7.84□□□□□ -1.15
SMG6-217ENST00000575338 PHKBQ93100 1093 aa7.84□□□□□ -1.15
SMG6-217ENST00000575338 AKT1S1Q96B36 256 aa7.84□□□□□ -1.15
SMG6-217ENST00000575338 ZKSCAN3Q9BRR0 538 aa7.84□□□□□ -1.15
SMG6-217ENST00000575338 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.84□□□□□ -1.15
SMG6-217ENST00000575338 FAM13BQ9NYF5 915 aa7.84□□□□□ -1.15
SMG6-217ENST00000575338 PCDHA7Q9UN72 937 aa7.84□□□□□ -1.15
SMG6-217ENST00000575338 GAKO14976 1311 aa7.83□□□□□ -1.16
SMG6-217ENST00000575338 MYO3BQ8WXR4 1341 aa7.83□□□□□ -1.16
SMG6-217ENST00000575338 PSME4Q14997 1843 aa7.83□□□□□ -1.16
SMG6-217ENST00000575338 BECN2A8MW95 431 aa7.83□□□□□ -1.16
SMG6-217ENST00000575338 SRGNP10124 158 aa7.83□□□□□ -1.16
SMG6-217ENST00000575338 RXRAP19793 462 aa7.83□□□□□ -1.16
SMG6-217ENST00000575338 SMARCA1P28370 1054 aa7.83□□□□□ -1.16
SMG6-217ENST00000575338 BTDP43251 543 aa7.83□□□□□ -1.16
SMG6-217ENST00000575338 TRAPPC10P48553 1259 aa7.83□□□□□ -1.16
SMG6-217ENST00000575338 FKBP1AP62942 108 aaKnown RBP7.83□□□□□ -1.16
SMG6-217ENST00000575338 DDR1Q08345 913 aa7.83□□□□□ -1.16
SMG6-217ENST00000575338 TPRNQ4KMQ1 711 aa7.83□□□□□ -1.16
SMG6-217ENST00000575338 STYK1Q6J9G0 422 aa7.83□□□□□ -1.16
SMG6-217ENST00000575338 DPP8Q6V1X1 898 aaPredicted RBP7.83□□□□□ -1.16
SMG6-217ENST00000575338 TMTC3Q6ZXV5 915 aa7.83□□□□□ -1.16
SMG6-217ENST00000575338 SMIM5Q71RC9 77 aa7.83□□□□□ -1.16
SMG6-217ENST00000575338 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.83□□□□□ -1.16
SMG6-217ENST00000575338 TXNRD3Q86VQ6 643 aa7.83□□□□□ -1.16
SMG6-217ENST00000575338 DIS3L2Q8IYB7 885 aaKnown RBP7.83□□□□□ -1.16
SMG6-217ENST00000575338 TEX11Q8IYF3 940 aa7.83□□□□□ -1.16
SMG6-217ENST00000575338 CEP57L1Q8IYX8 460 aa7.83□□□□□ -1.16
SMG6-217ENST00000575338 KRI1Q8N9T8 703 aaKnown RBP7.83□□□□□ -1.16
SMG6-217ENST00000575338 SUPT20HQ8NEM7 779 aa7.83□□□□□ -1.16
SMG6-217ENST00000575338 CNKSR1Q969H4 720 aa7.83□□□□□ -1.16
SMG6-217ENST00000575338 RTFDC1Q9BY42 306 aaPredicted RBP7.83□□□□□ -1.16
SMG6-217ENST00000575338 SH3GLB2Q9NR46 395 aa7.83□□□□□ -1.16
SMG6-217ENST00000575338 FAM217BQ9NTX9 383 aaPredicted RBP7.83□□□□□ -1.16
SMG6-217ENST00000575338 SWAP70Q9UH65 585 aa7.83□□□□□ -1.16
SMG6-217ENST00000575338 C10orf71Q711Q0 1435 aa7.83□□□□□ -1.16
SMG6-217ENST00000575338 MYH4Q9Y623 1939 aa7.82□□□□□ -1.16
SMG6-217ENST00000575338 FAM237AA0A1B0GTK4 181 aa7.82□□□□□ -1.16
SMG6-217ENST00000575338 H0YIN7 160 aa7.82□□□□□ -1.16
SMG6-217ENST00000575338 hCG_1984214I3L0E3 225 aa7.82□□□□□ -1.16
SMG6-217ENST00000575338 MYO1BO43795 1136 aa7.82□□□□□ -1.16
SMG6-217ENST00000575338 SYKP43405 635 aa7.82□□□□□ -1.16
SMG6-217ENST00000575338 ZNF165P49910 485 aa7.82□□□□□ -1.16
SMG6-217ENST00000575338 TROAPQ12815 778 aa7.82□□□□□ -1.16
SMG6-217ENST00000575338 CAMK4Q16566 473 aa7.82□□□□□ -1.16
SMG6-217ENST00000575338 ANO6Q4KMQ2 910 aa7.82□□□□□ -1.16
SMG6-217ENST00000575338 PODNQ7Z5L7 613 aa7.82□□□□□ -1.16
SMG6-217ENST00000575338 NBPF11Q86T75 865 aa7.82□□□□□ -1.16
SMG6-217ENST00000575338 RAB11FIP4Q86YS3 637 aa7.82□□□□□ -1.16
SMG6-217ENST00000575338 FMR1NBQ8N0W7 255 aaPredicted RBP7.82□□□□□ -1.16
SMG6-217ENST00000575338 ZNF713Q8N859 430 aaPredicted RBP7.82□□□□□ -1.16
SMG6-217ENST00000575338 ZNF579Q8NAF0 562 aaKnown RBP7.82□□□□□ -1.16
SMG6-217ENST00000575338 ENGASEQ8NFI3 743 aa7.82□□□□□ -1.16
SMG6-217ENST00000575338 SH3RF3Q8TEJ3 882 aaPredicted RBP7.82□□□□□ -1.16
SMG6-217ENST00000575338 ZNF384Q8TF68 577 aa7.82□□□□□ -1.16
SMG6-217ENST00000575338 FERMT2Q96AC1 680 aa7.82□□□□□ -1.16
SMG6-217ENST00000575338 BPIFA3Q9BQP9 254 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms