RNA–Protein interactions for RNA: ENST00000575156.5

ERCC4-207, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC4, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-207ENST00000575156 ERICH2A1L162 156 aa16.2■□□□□ 0.18
ERCC4-207ENST00000575156 ZNF444Q8N0Y2 327 aaPredicted RBP16.2■□□□□ 0.18
ERCC4-207ENST00000575156 DNAJC18Q9H819 358 aa16.2■□□□□ 0.18
ERCC4-207ENST00000575156 VEZTQ9HBM0 779 aa16.2■□□□□ 0.18
ERCC4-207ENST00000575156 SERPINB13Q9UIV8 391 aa16.2■□□□□ 0.18
ERCC4-207ENST00000575156 ASTN2O75129 1339 aaPredicted RBP16.19■□□□□ 0.18
ERCC4-207ENST00000575156 CCDC69A6NI79 296 aa16.19■□□□□ 0.18
ERCC4-207ENST00000575156 NPM3O75607 178 aaKnown RBP16.19■□□□□ 0.18
ERCC4-207ENST00000575156 SBF1O95248 1867 aa16.19■□□□□ 0.18
ERCC4-207ENST00000575156 RAB3GAP1Q15042 981 aa16.19■□□□□ 0.18
ERCC4-207ENST00000575156 TBC1D10BQ4KMP7 808 aaPredicted RBP16.19■□□□□ 0.18
ERCC4-207ENST00000575156 FOXD4L5Q5VV16 416 aaPredicted RBP16.19■□□□□ 0.18
ERCC4-207ENST00000575156 NSUN7Q8NE18 718 aaKnown RBP16.19■□□□□ 0.18
ERCC4-207ENST00000575156 FOXD4L4Q8WXT5 416 aaPredicted RBP16.19■□□□□ 0.18
ERCC4-207ENST00000575156 DPF2Q92785 391 aa16.19■□□□□ 0.18
ERCC4-207ENST00000575156 DDX11Q96FC9 970 aa16.19■□□□□ 0.18
ERCC4-207ENST00000575156 MTA3Q9BTC8 594 aa16.19■□□□□ 0.18
ERCC4-207ENST00000575156 SLC12A7Q9Y666 1083 aa16.19■□□□□ 0.18
ERCC4-207ENST00000575156 CNTNAP1P78357 1384 aa16.19■□□□□ 0.18
ERCC4-207ENST00000575156 ZBTB43O43298 467 aa16.18■□□□□ 0.18
ERCC4-207ENST00000575156 HLA-DOAP06340 250 aa16.18■□□□□ 0.18
ERCC4-207ENST00000575156 TSPY3P0CV98 308 aa16.18■□□□□ 0.18
ERCC4-207ENST00000575156 TSPY8P0CW00 308 aa16.18■□□□□ 0.18
ERCC4-207ENST00000575156 CDC27P30260 824 aa16.18■□□□□ 0.18
ERCC4-207ENST00000575156 SHMT1P34896 483 aa16.18■□□□□ 0.18
ERCC4-207ENST00000575156 ADD1P35611 737 aaKnown RBP16.18■□□□□ 0.18
ERCC4-207ENST00000575156 IFIT1BQ5T764 474 aaKnown RBP16.18■□□□□ 0.18
ERCC4-207ENST00000575156 RCSD1Q6JBY9 416 aa16.18■□□□□ 0.18
ERCC4-207ENST00000575156 CDAN1Q8IWY9 1227 aa16.18■□□□□ 0.18
ERCC4-207ENST00000575156 ENTPD3O75355 529 aa16.18■□□□□ 0.18
ERCC4-207ENST00000575156 METAP2P50579 478 aaKnown RBP eCLIP16.18■□□□□ 0.18
ERCC4-207ENST00000575156 C9orf131Q5VYM1 1079 aa16.18■□□□□ 0.18
ERCC4-207ENST00000575156 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.18■□□□□ 0.18
ERCC4-207ENST00000575156 FAM217BQ9NTX9 383 aaPredicted RBP16.18■□□□□ 0.18
ERCC4-207ENST00000575156 TMOD2Q9NZR1 351 aa16.18■□□□□ 0.18
ERCC4-207ENST00000575156 PTPDC1A2A3K4 754 aa16.17■□□□□ 0.18
ERCC4-207ENST00000575156 SHROOM1Q2M3G4 852 aaPredicted RBP16.17■□□□□ 0.18
ERCC4-207ENST00000575156 ZNF654Q8IZM8 581 aa16.17■□□□□ 0.18
ERCC4-207ENST00000575156 SMARCC2Q8TAQ2 1214 aa16.17■□□□□ 0.18
ERCC4-207ENST00000575156 DHX36Q9H2U1 1008 aaKnown RBP16.17■□□□□ 0.18
ERCC4-207ENST00000575156 ZNF287Q9HBT7 754 aa16.17■□□□□ 0.18
ERCC4-207ENST00000575156 SIPA1L1O43166 1804 aa16.17■□□□□ 0.18
ERCC4-207ENST00000575156 GOLGA8AA7E2F4 631 aa16.17■□□□□ 0.18
ERCC4-207ENST00000575156 DDNO94850 711 aaPredicted RBP16.17■□□□□ 0.18
ERCC4-207ENST00000575156 AKR1B1P15121 316 aa16.17■□□□□ 0.18
ERCC4-207ENST00000575156 SYT1P21579 422 aa16.17■□□□□ 0.18
ERCC4-207ENST00000575156 GPR162Q16538 588 aa16.17■□□□□ 0.18
ERCC4-207ENST00000575156 TMTC2Q8N394 836 aa16.17■□□□□ 0.18
ERCC4-207ENST00000575156 TNPO1Q92973 898 aaKnown RBP16.17■□□□□ 0.18
ERCC4-207ENST00000575156 TMEM39BQ9GZU3 492 aa16.17■□□□□ 0.18
ERCC4-207ENST00000575156 PI4KBQ9UBF8 816 aa16.17■□□□□ 0.18
ERCC4-207ENST00000575156 ATRNL1Q5VV63 1379 aa16.16■□□□□ 0.18
ERCC4-207ENST00000575156 DICER1Q9UPY3 1922 aaKnown RBP16.16■□□□□ 0.18
ERCC4-207ENST00000575156 GPC2Q8N158 579 aa16.16■□□□□ 0.18
ERCC4-207ENST00000575156 NEDD1Q8NHV4 660 aa16.16■□□□□ 0.18
ERCC4-207ENST00000575156 NUP133Q8WUM0 1156 aa16.16■□□□□ 0.18
ERCC4-207ENST00000575156 EHD4Q9H223 541 aa16.16■□□□□ 0.18
ERCC4-207ENST00000575156 MYO1BO43795 1136 aa16.15■□□□□ 0.18
ERCC4-207ENST00000575156 EPS15P42566 896 aa16.15■□□□□ 0.18
ERCC4-207ENST00000575156 NUCB2P80303 420 aa16.15■□□□□ 0.18
ERCC4-207ENST00000575156 CLEC10AQ8IUN9 316 aa16.15■□□□□ 0.18
ERCC4-207ENST00000575156 CRACR2BQ8N4Y2 399 aaPredicted RBP16.15■□□□□ 0.18
ERCC4-207ENST00000575156 TRPM4Q8TD43 1214 aa16.15■□□□□ 0.18
ERCC4-207ENST00000575156 FAM151AQ8WW52 585 aa16.15■□□□□ 0.18
ERCC4-207ENST00000575156 CSRNP1Q96S65 589 aa16.15■□□□□ 0.18
ERCC4-207ENST00000575156 LLPHQ9BRT6 129 aaKnown RBP16.15■□□□□ 0.18
ERCC4-207ENST00000575156 BRD1O95696 1058 aa16.15■□□□□ 0.18
ERCC4-207ENST00000575156 FDPSP14324 419 aaKnown RBP16.15■□□□□ 0.18
ERCC4-207ENST00000575156 KIF4BQ2VIQ3 1234 aa16.15■□□□□ 0.18
ERCC4-207ENST00000575156 SYNE3Q6ZMZ3 975 aa16.15■□□□□ 0.18
ERCC4-207ENST00000575156 CHMP4CQ96CF2 233 aa16.15■□□□□ 0.18
ERCC4-207ENST00000575156 CEP95Q96GE4 821 aa16.15■□□□□ 0.18
ERCC4-207ENST00000575156 CHAMP1Q96JM3 812 aa16.15■□□□□ 0.18
ERCC4-207ENST00000575156 TCP11L1Q9NUJ3 509 aa16.15■□□□□ 0.18
ERCC4-207ENST00000575156 GPRC5DQ9NZD1 345 aa16.15■□□□□ 0.18
ERCC4-207ENST00000575156 SWAP70Q9UH65 585 aa16.15■□□□□ 0.18
ERCC4-207ENST00000575156 TROAPQ12815 778 aa16.14■□□□□ 0.17
ERCC4-207ENST00000575156 CMTR1Q8N1G2 835 aaKnown RBP16.14■□□□□ 0.17
ERCC4-207ENST00000575156 STX8Q9UNK0 236 aa16.14■□□□□ 0.17
ERCC4-207ENST00000575156 UBE2Q2LH0YL09 131 aa16.14■□□□□ 0.17
ERCC4-207ENST00000575156 SOCS7O14512 581 aa16.14■□□□□ 0.17
ERCC4-207ENST00000575156 CPLX1O14810 134 aa16.14■□□□□ 0.17
ERCC4-207ENST00000575156 STX6O43752 255 aa16.14■□□□□ 0.17
ERCC4-207ENST00000575156 FOSBP53539 338 aa16.14■□□□□ 0.17
ERCC4-207ENST00000575156 RRP1BQ14684 758 aaKnown RBP16.14■□□□□ 0.17
ERCC4-207ENST00000575156 NTRK3Q16288 839 aa16.14■□□□□ 0.17
ERCC4-207ENST00000575156 RTN1Q16799 776 aa16.14■□□□□ 0.17
ERCC4-207ENST00000575156 FKBP1CQ5VVH2 108 aa16.14■□□□□ 0.17
ERCC4-207ENST00000575156 CATIPQ7Z7H3 387 aa16.14■□□□□ 0.17
ERCC4-207ENST00000575156 DGKHQ86XP1 1220 aa16.14■□□□□ 0.17
ERCC4-207ENST00000575156 FANCBQ8NB91 859 aa16.14■□□□□ 0.17
ERCC4-207ENST00000575156 PHKBQ93100 1093 aa16.14■□□□□ 0.17
ERCC4-207ENST00000575156 H7C1D1 291 aa16.13■□□□□ 0.17
ERCC4-207ENST00000575156 NT5C2P49902 561 aa16.13■□□□□ 0.17
ERCC4-207ENST00000575156 LARP1BQ659C4 914 aaKnown RBP16.13■□□□□ 0.17
ERCC4-207ENST00000575156 METTL16Q86W50 562 aaKnown RBP16.13■□□□□ 0.17
ERCC4-207ENST00000575156 FOXP4Q8IVH2 680 aaPredicted RBP16.13■□□□□ 0.17
ERCC4-207ENST00000575156 ANKS1AQ92625 1134 aa16.13■□□□□ 0.17
ERCC4-207ENST00000575156 PGAP2Q9UHJ9 254 aa16.13■□□□□ 0.17
ERCC4-207ENST00000575156 COL2A1P02458 1487 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms