RNA–Protein interactions for RNA: ENST00000575069.5

P4HB-220, Transcript of prolyl 4-hydroxylase subunit beta, humanhuman

TSL 2

Gene P4HB, Length 2,453 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HB-220ENST00000575069 MRIQ9BWK5 157 aa17.54■□□□□ 0.4
P4HB-220ENST00000575069 GJB4Q9NTQ9 266 aa17.54■□□□□ 0.4
P4HB-220ENST00000575069 DDX60LQ5H9U9 1706 aaKnown RBP17.53■□□□□ 0.4
P4HB-220ENST00000575069 CLCN1P35523 988 aa17.53■□□□□ 0.4
P4HB-220ENST00000575069 CDK8P49336 464 aa17.53■□□□□ 0.4
P4HB-220ENST00000575069 RBM5P52756 815 aaKnown RBP eCLIP17.53■□□□□ 0.42e-6■■□□□ 13.3
P4HB-220ENST00000575069 RESTQ13127 1097 aa17.53■□□□□ 0.4
P4HB-220ENST00000575069 RTN1Q16799 776 aa17.53■□□□□ 0.4
P4HB-220ENST00000575069 CPLX2Q6PUV4 134 aaKnown RBP17.53■□□□□ 0.4
P4HB-220ENST00000575069 GPT2Q8TD30 523 aa17.53■□□□□ 0.4
P4HB-220ENST00000575069 AIFM3Q96NN9 605 aa17.53■□□□□ 0.4
P4HB-220ENST00000575069 IL17RBQ9NRM6 502 aa17.53■□□□□ 0.4
P4HB-220ENST00000575069 COL4A5P29400 1685 aa17.53■□□□□ 0.4
P4HB-220ENST00000575069 RAD17O75943 681 aa17.53■□□□□ 0.4
P4HB-220ENST00000575069 CDKL5O76039 1030 aa17.53■□□□□ 0.4
P4HB-220ENST00000575069 KLHL40Q2TBA0 621 aa17.53■□□□□ 0.4
P4HB-220ENST00000575069 ZNF444Q8N0Y2 327 aaPredicted RBP17.53■□□□□ 0.4
P4HB-220ENST00000575069 CMTR1Q8N1G2 835 aaKnown RBP17.53■□□□□ 0.4
P4HB-220ENST00000575069 NID2Q14112 1375 aa17.52■□□□□ 0.4
P4HB-220ENST00000575069 UBE2Q2LH0YL09 131 aa17.52■□□□□ 0.4
P4HB-220ENST00000575069 FIBPO43427 364 aa17.52■□□□□ 0.4
P4HB-220ENST00000575069 GADD45BO75293 160 aaPredicted RBP17.52■□□□□ 0.4
P4HB-220ENST00000575069 RASA1P20936 1047 aa17.52■□□□□ 0.4
P4HB-220ENST00000575069 IARSP41252 1262 aaKnown RBP17.52■□□□□ 0.4
P4HB-220ENST00000575069 C16orf86Q6ZW13 317 aa17.52■□□□□ 0.4
P4HB-220ENST00000575069 HDLBPQ00341 1268 aaKnown RBP17.52■□□□□ 0.39
P4HB-220ENST00000575069 NFIAQ12857 509 aa17.52■□□□□ 0.39
P4HB-220ENST00000575069 RCSD1Q6JBY9 416 aa17.52■□□□□ 0.39
P4HB-220ENST00000575069 CCDC82Q8N4S0 544 aa17.52■□□□□ 0.39
P4HB-220ENST00000575069 C8orf76Q96K31 380 aa17.52■□□□□ 0.39
P4HB-220ENST00000575069 PTGER2P43116 358 aa17.51■□□□□ 0.39
P4HB-220ENST00000575069 CACNB3P54284 484 aa17.51■□□□□ 0.39
P4HB-220ENST00000575069 SOGA3Q5TF21 947 aa17.51■□□□□ 0.39
P4HB-220ENST00000575069 CATIPQ7Z7H3 387 aa17.51■□□□□ 0.39
P4HB-220ENST00000575069 TFIP11Q9UBB9 837 aaKnown RBP17.51■□□□□ 0.39
P4HB-220ENST00000575069 TSPY3P0CV98 308 aa17.5■□□□□ 0.39
P4HB-220ENST00000575069 TSPY8P0CW00 308 aa17.5■□□□□ 0.39
P4HB-220ENST00000575069 IFNAR1P17181 557 aa17.5■□□□□ 0.39
P4HB-220ENST00000575069 RCAN1P53805 252 aa17.5■□□□□ 0.39
P4HB-220ENST00000575069 TROAPQ12815 778 aa17.5■□□□□ 0.39
P4HB-220ENST00000575069 TMEM87AQ8NBN3 555 aa17.5■□□□□ 0.39
P4HB-220ENST00000575069 FBXO18Q8NFZ0 1043 aa17.5■□□□□ 0.39
P4HB-220ENST00000575069 SLC26A6Q9BXS9 759 aa17.5■□□□□ 0.39
P4HB-220ENST00000575069 GRPEL1Q9HAV7 217 aa17.5■□□□□ 0.39
P4HB-220ENST00000575069 SERPINA10Q9UK55 444 aa17.5■□□□□ 0.39
P4HB-220ENST00000575069 TAOK2Q9UL54 1235 aa17.5■□□□□ 0.39
P4HB-220ENST00000575069 ECM29Q5VYK3 1845 aa17.5■□□□□ 0.39
P4HB-220ENST00000575069 BRCA1P38398 1863 aaKnown RBP17.5■□□□□ 0.39
P4HB-220ENST00000575069 PSMD14O00487 310 aa17.5■□□□□ 0.39
P4HB-220ENST00000575069 SSRP1Q08945 709 aaKnown RBP17.5■□□□□ 0.39
P4HB-220ENST00000575069 ZFPM1Q8IX07 1006 aa17.5■□□□□ 0.39
P4HB-220ENST00000575069 ALG1Q9BT22 464 aa17.5■□□□□ 0.39
P4HB-220ENST00000575069 ZSCAN16Q9H4T2 348 aaPredicted RBP17.5■□□□□ 0.39
P4HB-220ENST00000575069 OSBPL5Q9H0X9 879 aaPredicted RBP17.49■□□□□ 0.39
P4HB-220ENST00000575069 ZNF287Q9HBT7 754 aa17.49■□□□□ 0.39
P4HB-220ENST00000575069 CD2APQ9Y5K6 639 aa17.49■□□□□ 0.39
P4HB-220ENST00000575069 PSME4Q14997 1843 aa17.49■□□□□ 0.39
P4HB-220ENST00000575069 CCDC196A0A1B0GTZ2 297 aa17.49■□□□□ 0.39
P4HB-220ENST00000575069 FMNL1O95466 1100 aaPredicted RBP17.49■□□□□ 0.39
P4HB-220ENST00000575069 MRE11P49959 708 aa17.49■□□□□ 0.39
P4HB-220ENST00000575069 TPRNQ4KMQ1 711 aa17.49■□□□□ 0.39
P4HB-220ENST00000575069 RSBN1LQ6PCB5 846 aaPredicted RBP17.49■□□□□ 0.39
P4HB-220ENST00000575069 NBPF11Q86T75 865 aa17.49■□□□□ 0.39
P4HB-220ENST00000575069 TTC6Q86TZ1 520 aa17.49■□□□□ 0.39
P4HB-220ENST00000575069 VPS33BQ9H267 617 aa17.49■□□□□ 0.39
P4HB-220ENST00000575069 VIL1P09327 827 aaKnown RBP17.48■□□□□ 0.39
P4HB-220ENST00000575069 GUCY1A2P33402 732 aa17.48■□□□□ 0.39
P4HB-220ENST00000575069 KRT85P78386 507 aa17.48■□□□□ 0.39
P4HB-220ENST00000575069 GAS2L3Q86XJ1 694 aa17.48■□□□□ 0.39
P4HB-220ENST00000575069 DGKHQ86XP1 1220 aa17.48■□□□□ 0.39
P4HB-220ENST00000575069 CRACR2BQ8N4Y2 399 aaPredicted RBP17.48■□□□□ 0.39
P4HB-220ENST00000575069 NT5C2P49902 561 aa17.48■□□□□ 0.39
P4HB-220ENST00000575069 CFAP100Q494V2 611 aa17.48■□□□□ 0.39
P4HB-220ENST00000575069 TCP11L1Q9NUJ3 509 aa17.48■□□□□ 0.39
P4HB-220ENST00000575069 ZNRF3Q9ULT6 936 aa17.48■□□□□ 0.39
P4HB-220ENST00000575069 BCS1LQ9Y276 419 aa17.48■□□□□ 0.39
P4HB-220ENST00000575069 ZBTB12Q9Y330 459 aaPredicted RBP17.48■□□□□ 0.39
P4HB-220ENST00000575069 GABPAQ06546 454 aa17.47■□□□□ 0.39
P4HB-220ENST00000575069 TCP10Q12799 353 aa17.47■□□□□ 0.39
P4HB-220ENST00000575069 NIM1KQ8IY84 436 aa17.47■□□□□ 0.39
P4HB-220ENST00000575069 ANKS1AQ92625 1134 aa17.47■□□□□ 0.39
P4HB-220ENST00000575069 PRMT6Q96LA8 375 aaPredicted RBP17.47■□□□□ 0.39
P4HB-220ENST00000575069 TDRD3Q9H7E2 651 aaKnown RBP17.47■□□□□ 0.39
P4HB-220ENST00000575069 DDAH1O94760 285 aa17.47■□□□□ 0.39
P4HB-220ENST00000575069 CALM1P0DP23 149 aa17.47■□□□□ 0.39
P4HB-220ENST00000575069 CALM2P0DP24 149 aa17.47■□□□□ 0.39
P4HB-220ENST00000575069 CALM3P0DP25 149 aa17.47■□□□□ 0.39
P4HB-220ENST00000575069 SLURP2P0DP57 97 aa17.47■□□□□ 0.39
P4HB-220ENST00000575069 PPP2R5BQ15173 497 aa17.47■□□□□ 0.39
P4HB-220ENST00000575069 CAVIN1Q6NZI2 390 aaKnown RBP17.47■□□□□ 0.39
P4HB-220ENST00000575069 GMLQ99445 158 aa17.47■□□□□ 0.39
P4HB-220ENST00000575069 TAOK3Q9H2K8 898 aa17.47■□□□□ 0.39
P4HB-220ENST00000575069 RBM27Q9P2N5 1060 aaKnown RBP17.47■□□□□ 0.39
P4HB-220ENST00000575069 FAM198AQ9UFP1 575 aa17.47■□□□□ 0.39
P4HB-220ENST00000575069 FER1L6Q2WGJ9 1857 aa17.47■□□□□ 0.39
P4HB-220ENST00000575069 STK36Q9NRP7 1315 aa17.46■□□□□ 0.39
P4HB-220ENST00000575069 PLEKHA8P1O95397 391 aa17.46■□□□□ 0.39
P4HB-220ENST00000575069 NEDD1Q8NHV4 660 aa17.46■□□□□ 0.39
P4HB-220ENST00000575069 KAT14Q9H8E8 782 aa17.46■□□□□ 0.39
P4HB-220ENST00000575069 BAZ2BQ9UIF8 2168 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms