RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 SLU7O95391 586 aaKnown RBP10.26□□□□□ -0.77
NCBP3-204ENST00000574911 GYG1P46976 350 aa10.26□□□□□ -0.77
NCBP3-204ENST00000574911 FUT2Q10981 343 aa10.26□□□□□ -0.77
NCBP3-204ENST00000574911 UBE4AQ14139 1066 aa10.26□□□□□ -0.77
NCBP3-204ENST00000574911 MORC3Q14149 939 aa10.26□□□□□ -0.77
NCBP3-204ENST00000574911 CFAP100Q494V2 611 aa10.26□□□□□ -0.77
NCBP3-204ENST00000574911 L2HGDHQ9H9P8 463 aa10.26□□□□□ -0.77
NCBP3-204ENST00000574911 INTS13Q9NVM9 706 aa10.26□□□□□ -0.77
NCBP3-204ENST00000574911 GNL3LQ9NVN8 582 aaKnown RBP10.26□□□□□ -0.77
NCBP3-204ENST00000574911 RAI14Q9P0K7 980 aa10.26□□□□□ -0.77
NCBP3-204ENST00000574911 IQSEC3Q9UPP2 1182 aaPredicted RBP10.26□□□□□ -0.77
NCBP3-204ENST00000574911 ROBO1Q9Y6N7 1651 aa10.25□□□□□ -0.77
NCBP3-204ENST00000574911 KDM4FA0A1W2PPD8 638 aa10.25□□□□□ -0.77
NCBP3-204ENST00000574911 TMEM232C9JQI7 657 aa10.25□□□□□ -0.77
NCBP3-204ENST00000574911 SMIM22K7EJ46 135 aa10.25□□□□□ -0.77
NCBP3-204ENST00000574911 CCP110O43303 1012 aa10.25□□□□□ -0.77
NCBP3-204ENST00000574911 ACTN4O43707 911 aaKnown RBP10.25□□□□□ -0.77
NCBP3-204ENST00000574911 FGRP09769 529 aa10.25□□□□□ -0.77
NCBP3-204ENST00000574911 SF3B3Q15393 1217 aaKnown RBP10.25□□□□□ -0.77
NCBP3-204ENST00000574911 PKN1Q16512 942 aa10.25□□□□□ -0.77
NCBP3-204ENST00000574911 TRIML1Q8N9V2 468 aa10.25□□□□□ -0.77
NCBP3-204ENST00000574911 MLKLQ8NB16 471 aa10.25□□□□□ -0.77
NCBP3-204ENST00000574911 ZSCAN10Q96SZ4 725 aaPredicted RBP10.25□□□□□ -0.77
NCBP3-204ENST00000574911 BRIP1Q9BX63 1249 aa10.25□□□□□ -0.77
NCBP3-204ENST00000574911 CABP5Q9NP86 173 aa10.25□□□□□ -0.77
NCBP3-204ENST00000574911 ABCF2Q9UG63 623 aa10.25□□□□□ -0.77
NCBP3-204ENST00000574911 CACNA1SQ13698 1873 aa10.25□□□□□ -0.77
NCBP3-204ENST00000574911 MYH14Q7Z406 1995 aaKnown RBP10.25□□□□□ -0.77
NCBP3-204ENST00000574911 PRPF3O43395 683 aaKnown RBP10.25□□□□□ -0.77
NCBP3-204ENST00000574911 ZNF18P17022 549 aa10.25□□□□□ -0.77
NCBP3-204ENST00000574911 TBX2Q13207 712 aaPredicted RBP10.25□□□□□ -0.77
NCBP3-204ENST00000574911 CCDC93Q567U6 631 aa10.25□□□□□ -0.77
NCBP3-204ENST00000574911 KANK3Q6NY19 840 aa10.25□□□□□ -0.77
NCBP3-204ENST00000574911 C3orf67Q6ZVT6 689 aa10.25□□□□□ -0.77
NCBP3-204ENST00000574911 ANKRD18AQ8IVF6 992 aa10.25□□□□□ -0.77
NCBP3-204ENST00000574911 ENAHQ8N8S7 591 aaPredicted RBP10.25□□□□□ -0.77
NCBP3-204ENST00000574911 SPATA20Q8TB22 786 aa10.25□□□□□ -0.77
NCBP3-204ENST00000574911 ENOX1Q8TC92 643 aaKnown RBP10.25□□□□□ -0.77
NCBP3-204ENST00000574911 SMARCE1Q969G3 411 aa10.25□□□□□ -0.77
NCBP3-204ENST00000574911 PHF20Q9BVI0 1012 aa10.25□□□□□ -0.77
NCBP3-204ENST00000574911 ZNF652Q9Y2D9 606 aa10.25□□□□□ -0.77
NCBP3-204ENST00000574911 SPDYE4A6NLX3 237 aa10.24□□□□□ -0.77
NCBP3-204ENST00000574911 TOP1P11387 765 aaKnown RBP10.24□□□□□ -0.77
NCBP3-204ENST00000574911 DYNLL1P63167 89 aaKnown RBP10.24□□□□□ -0.77
NCBP3-204ENST00000574911 FMR1Q06787 632 aaKnown RBP eCLIP10.24□□□□□ -0.77
NCBP3-204ENST00000574911 ERFEQ4G0M1 354 aa10.24□□□□□ -0.77
NCBP3-204ENST00000574911 CLEC4GQ6UXB4 293 aa10.24□□□□□ -0.77
NCBP3-204ENST00000574911 CSRNP2Q9H175 543 aa10.24□□□□□ -0.77
NCBP3-204ENST00000574911 BSDC1Q9NW68 430 aaPredicted RBP10.24□□□□□ -0.77
NCBP3-204ENST00000574911 AATFQ9NY61 560 aaKnown RBP eCLIP10.24□□□□□ -0.77
NCBP3-204ENST00000574911 DACH1Q9UI36 760 aa10.24□□□□□ -0.77
NCBP3-204ENST00000574911 SCN7AQ01118 1682 aa10.24□□□□□ -0.77
NCBP3-204ENST00000574911 A0A0G2JS52 829 aa10.24□□□□□ -0.77
NCBP3-204ENST00000574911 WTIPA6NIX2 430 aaPredicted RBP10.24□□□□□ -0.77
NCBP3-204ENST00000574911 SYT10Q6XYQ8 523 aa10.24□□□□□ -0.77
NCBP3-204ENST00000574911 USP49Q70CQ1 688 aa10.24□□□□□ -0.77
NCBP3-204ENST00000574911 FCHSD1Q86WN1 690 aa10.24□□□□□ -0.77
NCBP3-204ENST00000574911 ZNF384Q8TF68 577 aa10.24□□□□□ -0.77
NCBP3-204ENST00000574911 RBM28Q9NW13 759 aaKnown RBP10.24□□□□□ -0.77
NCBP3-204ENST00000574911 OGFRQ9NZT2 677 aa10.24□□□□□ -0.77
NCBP3-204ENST00000574911 DLEC1Q9Y238 1755 aa10.24□□□□□ -0.77
NCBP3-204ENST00000574911 COL5A3P25940 1745 aaPredicted RBP10.24□□□□□ -0.77
NCBP3-204ENST00000574911 PCP11498 1178 aaKnown RBP10.23□□□□□ -0.77
NCBP3-204ENST00000574911 XBP1P17861 261 aa10.23□□□□□ -0.77
NCBP3-204ENST00000574911 KRT2P35908 639 aa10.23□□□□□ -0.77
NCBP3-204ENST00000574911 AKAP17AQ02040 695 aaKnown RBP10.23□□□□□ -0.77
NCBP3-204ENST00000574911 EARS2Q5JPH6 523 aaKnown RBP10.23□□□□□ -0.77
NCBP3-204ENST00000574911 CATIPQ7Z7H3 387 aa10.23□□□□□ -0.77
NCBP3-204ENST00000574911 TMEM139Q8IV31 216 aa10.23□□□□□ -0.77
NCBP3-204ENST00000574911 REXO1L1PQ8IX06 675 aa10.23□□□□□ -0.77
NCBP3-204ENST00000574911 GRAMD1CQ8IYS0 662 aa10.23□□□□□ -0.77
NCBP3-204ENST00000574911 ZNF397Q8NF99 534 aaPredicted RBP10.23□□□□□ -0.77
NCBP3-204ENST00000574911 MED15Q96RN5 788 aa10.23□□□□□ -0.77
NCBP3-204ENST00000574911 VPS54Q9P1Q0 977 aa10.23□□□□□ -0.77
NCBP3-204ENST00000574911 MINPP1Q9UNW1 487 aa10.23□□□□□ -0.77
NCBP3-204ENST00000574911 PHLPP2Q6ZVD8 1323 aa10.23□□□□□ -0.77
NCBP3-204ENST00000574911 CYP2D7A0A087X1C5 515 aa10.23□□□□□ -0.77
NCBP3-204ENST00000574911 FAM205CA6NFA0 338 aa10.23□□□□□ -0.77
NCBP3-204ENST00000574911 TRIM75PA6NK02 468 aa10.23□□□□□ -0.77
NCBP3-204ENST00000574911 PLEKHA8P1O95397 391 aa10.23□□□□□ -0.77
NCBP3-204ENST00000574911 ZSCAN20P17040 1043 aaPredicted RBP10.23□□□□□ -0.77
NCBP3-204ENST00000574911 CAVIN4Q5BKX8 364 aa10.23□□□□□ -0.77
NCBP3-204ENST00000574911 IFIT1BQ5T764 474 aaKnown RBP10.23□□□□□ -0.77
NCBP3-204ENST00000574911 SH3RF1Q7Z6J0 888 aa10.23□□□□□ -0.77
NCBP3-204ENST00000574911 SMARCC1Q92922 1105 aaPredicted RBP10.23□□□□□ -0.77
NCBP3-204ENST00000574911 FAM84BQ96KN1 310 aaPredicted RBP10.23□□□□□ -0.77
NCBP3-204ENST00000574911 PRDM10Q9NQV6 1147 aa10.23□□□□□ -0.77
NCBP3-204ENST00000574911 DDX41Q9UJV9 622 aaKnown RBP10.23□□□□□ -0.77
NCBP3-204ENST00000574911 NFE2L3Q9Y4A8 694 aa10.23□□□□□ -0.77
NCBP3-204ENST00000574911 KAT6BQ8WYB5 2073 aa10.22□□□□□ -0.77
NCBP3-204ENST00000574911 CALM1P0DP23 149 aa10.22□□□□□ -0.77
NCBP3-204ENST00000574911 CALM2P0DP24 149 aa10.22□□□□□ -0.77
NCBP3-204ENST00000574911 CALM3P0DP25 149 aa10.22□□□□□ -0.77
NCBP3-204ENST00000574911 ATP2B1P20020 1258 aa10.22□□□□□ -0.77
NCBP3-204ENST00000574911 PLCD1P51178 756 aa10.22□□□□□ -0.77
NCBP3-204ENST00000574911 ETF1P62495 437 aaKnown RBP10.22□□□□□ -0.77
NCBP3-204ENST00000574911 GOLGA8FQ08AF8 430 aa10.22□□□□□ -0.77
NCBP3-204ENST00000574911 GOLGA8DPQ0D2H9 430 aa10.22□□□□□ -0.77
NCBP3-204ENST00000574911 TROAPQ12815 778 aa10.22□□□□□ -0.77
NCBP3-204ENST00000574911 CT47A1Q5JQC4 288 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms