RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 BACE1P56817 501 aa23.82■■□□□ 1.4
SCARF1-208ENST00000574545 GABPAQ06546 454 aa23.82■■□□□ 1.4
SCARF1-208ENST00000574545 KIF22Q14807 665 aa23.82■■□□□ 1.4
SCARF1-208ENST00000574545 SDR42E1Q8WUS8 393 aa23.82■■□□□ 1.4
SCARF1-208ENST00000574545 TRIM47Q96LD4 638 aa23.82■■□□□ 1.4
SCARF1-208ENST00000574545 TRIM34Q9BYJ4 488 aa23.82■■□□□ 1.4
SCARF1-208ENST00000574545 DCP1AQ9NPI6 582 aaPredicted RBP23.82■■□□□ 1.4
SCARF1-208ENST00000574545 LOC285556D6RIA3 1793 aa23.81■■□□□ 1.4
SCARF1-208ENST00000574545 EVX2Q03828 476 aa23.81■■□□□ 1.4
SCARF1-208ENST00000574545 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.81■■□□□ 1.4
SCARF1-208ENST00000574545 ARMT1Q9H993 441 aa23.81■■□□□ 1.4
SCARF1-208ENST00000574545 SHMT1P34896 483 aa23.8■■□□□ 1.4
SCARF1-208ENST00000574545 PSMC4P43686 418 aa23.8■■□□□ 1.4
SCARF1-208ENST00000574545 PRKAB2O43741 272 aa23.79■■□□□ 1.4
SCARF1-208ENST00000574545 PRMT2P55345 433 aa23.79■■□□□ 1.4
SCARF1-208ENST00000574545 TSHZ3Q63HK5 1081 aa23.79■■□□□ 1.4
SCARF1-208ENST00000574545 MCM9Q9NXL9 1143 aa23.79■■□□□ 1.4
SCARF1-208ENST00000574545 SRRDQ9UH36 339 aa23.79■■□□□ 1.4
SCARF1-208ENST00000574545 KIAA0100Q14667 2235 aaKnown RBP23.79■■□□□ 1.4
SCARF1-208ENST00000574545 C19orf81C9J6K1 198 aa23.78■■□□□ 1.4
SCARF1-208ENST00000574545 MBD4O95243 580 aa23.78■■□□□ 1.4
SCARF1-208ENST00000574545 GH2P01242 217 aa23.78■■□□□ 1.4
SCARF1-208ENST00000574545 POLR3DP05423 398 aaPredicted RBP23.78■■□□□ 1.4
SCARF1-208ENST00000574545 MTMR2Q13614 643 aa23.78■■□□□ 1.4
SCARF1-208ENST00000574545 ZNF333Q96JL9 665 aa23.78■■□□□ 1.4
SCARF1-208ENST00000574545 PUS7LQ9H0K6 701 aaKnown RBP23.78■■□□□ 1.4
SCARF1-208ENST00000574545 USP17L10C9JJH3 530 aa23.77■■□□□ 1.4
SCARF1-208ENST00000574545 OSBPP22059 807 aa23.77■■□□□ 1.4
SCARF1-208ENST00000574545 CERKLQ49MI3 558 aaPredicted RBP23.77■■□□□ 1.4
SCARF1-208ENST00000574545 ZSCAN25Q6NSZ9 544 aa23.77■■□□□ 1.4
SCARF1-208ENST00000574545 KBTBD3Q8NAB2 608 aa23.77■■□□□ 1.4
SCARF1-208ENST00000574545 ATP8A2Q9NTI2 1148 aa23.77■■□□□ 1.4
SCARF1-208ENST00000574545 PNMA3Q9UL41 463 aa23.77■■□□□ 1.4
SCARF1-208ENST00000574545 NAV1Q8NEY1 1877 aa23.77■■□□□ 1.4
SCARF1-208ENST00000574545 MYH7P12883 1935 aa23.76■■□□□ 1.39
SCARF1-208ENST00000574545 TNRC18O15417 2968 aaPredicted RBP23.76■■□□□ 1.39
SCARF1-208ENST00000574545 ECM2O94769 699 aaPredicted RBP23.76■■□□□ 1.39
SCARF1-208ENST00000574545 HOXA7P31268 230 aaPredicted RBP23.76■■□□□ 1.39
SCARF1-208ENST00000574545 PI4K2BQ8TCG2 481 aa23.76■■□□□ 1.39
SCARF1-208ENST00000574545 OTUD7AQ8TE49 926 aaPredicted RBP23.76■■□□□ 1.39
SCARF1-208ENST00000574545 SMCR8Q8TEV9 937 aaPredicted RBP23.76■■□□□ 1.39
SCARF1-208ENST00000574545 GPATCH3Q96I76 525 aa23.76■■□□□ 1.39
SCARF1-208ENST00000574545 ASCC2Q9H1I8 757 aaPredicted RBP23.76■■□□□ 1.39
SCARF1-208ENST00000574545 EMILIN3Q9NT22 766 aa23.76■■□□□ 1.39
SCARF1-208ENST00000574545 SALL3Q9BXA9 1300 aa23.76■■□□□ 1.39
SCARF1-208ENST00000574545 FMNL1O95466 1100 aaPredicted RBP23.75■■□□□ 1.39
SCARF1-208ENST00000574545 CYP2D6P10635 497 aa23.75■■□□□ 1.39
SCARF1-208ENST00000574545 GUCY1A2P33402 732 aa23.75■■□□□ 1.39
SCARF1-208ENST00000574545 PABPC4Q13310 644 aaKnown RBP eCLIP23.75■■□□□ 1.39
SCARF1-208ENST00000574545 HDAC1Q13547 482 aaPredicted RBP23.75■■□□□ 1.39
SCARF1-208ENST00000574545 TTC41PQ6P2S7 1318 aa23.75■■□□□ 1.39
SCARF1-208ENST00000574545 POTEFA5A3E0 1075 aa23.74■■□□□ 1.39
SCARF1-208ENST00000574545 HOXD10P28358 340 aa23.74■■□□□ 1.39
SCARF1-208ENST00000574545 FAM110CQ1W6H9 321 aa23.74■■□□□ 1.39
SCARF1-208ENST00000574545 ABCB5Q2M3G0 1257 aa23.74■■□□□ 1.39
SCARF1-208ENST00000574545 SLC9C1Q4G0N8 1177 aa23.74■■□□□ 1.39
SCARF1-208ENST00000574545 TAOK2Q9UL54 1235 aa23.74■■□□□ 1.39
SCARF1-208ENST00000574545 SMIM22K7EJ46 135 aa23.73■■□□□ 1.39
SCARF1-208ENST00000574545 GCLCP48506 637 aaPredicted RBP23.73■■□□□ 1.39
SCARF1-208ENST00000574545 FCGRTP55899 365 aa23.73■■□□□ 1.39
SCARF1-208ENST00000574545 NBPF11Q86T75 865 aa23.73■■□□□ 1.39
SCARF1-208ENST00000574545 ANKRD13CQ8N6S4 541 aa23.73■■□□□ 1.39
SCARF1-208ENST00000574545 C12orf42Q96LP6 360 aa23.73■■□□□ 1.39
SCARF1-208ENST00000574545 STRBPQ96SI9 672 aaKnown RBP23.73■■□□□ 1.39
SCARF1-208ENST00000574545 TMOD4Q9NZQ9 345 aa23.73■■□□□ 1.39
SCARF1-208ENST00000574545 MKI67P46013 3256 aaKnown RBP23.73■■□□□ 1.39
SCARF1-208ENST00000574545 MGAMO43451 1857 aa23.73■■□□□ 1.39
SCARF1-208ENST00000574545 AAMPQ13685 434 aa23.72■■□□□ 1.39
SCARF1-208ENST00000574545 C12orf60Q5U649 245 aa23.72■■□□□ 1.39
SCARF1-208ENST00000574545 SH3TC2Q8TF17 1288 aa23.72■■□□□ 1.39
SCARF1-208ENST00000574545 OSBP2Q969R2 916 aa23.72■■□□□ 1.39
SCARF1-208ENST00000574545 P2RX7Q99572 595 aaKnown RBP23.72■■□□□ 1.39
SCARF1-208ENST00000574545 MYPNQ86TC9 1320 aa23.71■■□□□ 1.39
SCARF1-208ENST00000574545 RNF113AO15541 343 aaKnown RBP23.71■■□□□ 1.39
SCARF1-208ENST00000574545 PRKCZQ05513 592 aa23.71■■□□□ 1.39
SCARF1-208ENST00000574545 RAB3GAP1Q15042 981 aa23.71■■□□□ 1.39
SCARF1-208ENST00000574545 USP17L2Q6R6M4 530 aa23.71■■□□□ 1.39
SCARF1-208ENST00000574545 SLC44A5Q8NCS7 719 aa23.71■■□□□ 1.39
SCARF1-208ENST00000574545 ACER1Q8TDN7 264 aa23.71■■□□□ 1.39
SCARF1-208ENST00000574545 GCC1Q96CN9 775 aa23.71■■□□□ 1.39
SCARF1-208ENST00000574545 DYNLL2Q96FJ2 89 aa23.71■■□□□ 1.39
SCARF1-208ENST00000574545 CABP5Q9NP86 173 aa23.71■■□□□ 1.39
SCARF1-208ENST00000574545 SWAP70Q9UH65 585 aa23.71■■□□□ 1.39
SCARF1-208ENST00000574545 GABRQQ9UN88 632 aa23.71■■□□□ 1.39
SCARF1-208ENST00000574545 SLC4A4Q9Y6R1 1079 aa23.71■■□□□ 1.39
SCARF1-208ENST00000574545 DOCK3Q8IZD9 2030 aa23.71■■□□□ 1.39
SCARF1-208ENST00000574545 BAZ2AQ9UIF9 1905 aaKnown RBP23.71■■□□□ 1.39
SCARF1-208ENST00000574545 CYP2D7A0A087X1C5 515 aa23.7■■□□□ 1.38
SCARF1-208ENST00000574545 USP17L12C9JPN9 530 aa23.7■■□□□ 1.38
SCARF1-208ENST00000574545 USP17L21D6R901 530 aa23.7■■□□□ 1.38
SCARF1-208ENST00000574545 SEPT2Q15019 361 aa23.7■■□□□ 1.38
SCARF1-208ENST00000574545 APPBP2Q92624 585 aa23.7■■□□□ 1.38
SCARF1-208ENST00000574545 KIAA1683Q9H0B3 1180 aa23.7■■□□□ 1.38
SCARF1-208ENST00000574545 MORF4L1Q9UBU8 362 aa23.7■■□□□ 1.38
SCARF1-208ENST00000574545 PDE4DIPQ5VU43 2346 aa23.69■■□□□ 1.38
SCARF1-208ENST00000574545 ERC2O15083 957 aa23.69■■□□□ 1.38
SCARF1-208ENST00000574545 GLRX3O76003 335 aaKnown RBP23.69■■□□□ 1.38
SCARF1-208ENST00000574545 ZFYP08048 801 aaPredicted RBP23.69■■□□□ 1.38
SCARF1-208ENST00000574545 ANKRD45Q5TZF3 282 aa23.69■■□□□ 1.38
SCARF1-208ENST00000574545 CTR9Q6PD62 1173 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms