RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 FAM47AQ5JRC9 791 aa18.44■□□□□ 0.54
USP43-204ENST00000573955 ANKRD7Q92527 254 aa18.44■□□□□ 0.54
USP43-204ENST00000573955 ANAPC4Q9UJX5 808 aa18.44■□□□□ 0.54
USP43-204ENST00000573955 MYH2Q9UKX2 1941 aa18.44■□□□□ 0.54
USP43-204ENST00000573955 PDS5AQ29RF7 1337 aaKnown RBP18.43■□□□□ 0.54
USP43-204ENST00000573955 NMT2O60551 498 aa18.43■□□□□ 0.54
USP43-204ENST00000573955 MYSM1Q5VVJ2 828 aa18.43■□□□□ 0.54
USP43-204ENST00000573955 ENAHQ8N8S7 591 aaPredicted RBP18.43■□□□□ 0.54
USP43-204ENST00000573955 TDRD7Q8NHU6 1098 aaKnown RBP18.43■□□□□ 0.54
USP43-204ENST00000573955 USP25Q9UHP3 1055 aa18.43■□□□□ 0.54
USP43-204ENST00000573955 GGA1Q9UJY5 639 aa18.43■□□□□ 0.54
USP43-204ENST00000573955 USP17L8P0C7I0 530 aa18.43■□□□□ 0.54
USP43-204ENST00000573955 STK38Q15208 465 aa18.43■□□□□ 0.54
USP43-204ENST00000573955 SF3A1Q15459 793 aaKnown RBP18.43■□□□□ 0.54
USP43-204ENST00000573955 MCM9Q9NXL9 1143 aa18.43■□□□□ 0.54
USP43-204ENST00000573955 C6orf229H3BNL8 230 aa18.42■□□□□ 0.54
USP43-204ENST00000573955 SPTY2D1Q68D10 685 aaPredicted RBP18.42■□□□□ 0.54
USP43-204ENST00000573955 WDR66Q8TBY9 1149 aa18.42■□□□□ 0.54
USP43-204ENST00000573955 CLSTN2Q9H4D0 955 aa18.42■□□□□ 0.54
USP43-204ENST00000573955 DDX19AQ9NUU7 478 aaKnown RBP18.42■□□□□ 0.54
USP43-204ENST00000573955 CCDC192P0DO97 292 aa18.42■□□□□ 0.54
USP43-204ENST00000573955 TRIM29Q14134 588 aa18.42■□□□□ 0.54
USP43-204ENST00000573955 MPNDQ8N594 471 aa18.42■□□□□ 0.54
USP43-204ENST00000573955 SH3RF3Q8TEJ3 882 aaPredicted RBP18.42■□□□□ 0.54
USP43-204ENST00000573955 ZSCAN10Q96SZ4 725 aaPredicted RBP18.42■□□□□ 0.54
USP43-204ENST00000573955 POLLQ9UGP5 575 aa18.42■□□□□ 0.54
USP43-204ENST00000573955 PCDHA7Q9UN72 937 aa18.42■□□□□ 0.54
USP43-204ENST00000573955 hCG_1642624A0A1W2PR95 340 aa18.41■□□□□ 0.54
USP43-204ENST00000573955 USP5P45974 858 aa18.41■□□□□ 0.54
USP43-204ENST00000573955 SEC23AQ15436 765 aa18.41■□□□□ 0.54
USP43-204ENST00000573955 FANCBQ8NB91 859 aa18.41■□□□□ 0.54
USP43-204ENST00000573955 CD209Q9NNX6 404 aa18.41■□□□□ 0.54
USP43-204ENST00000573955 KCNJ14Q9UNX9 436 aa18.41■□□□□ 0.54
USP43-204ENST00000573955 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.41■□□□□ 0.54
USP43-204ENST00000573955 TERF2Q15554 542 aa18.41■□□□□ 0.54
USP43-204ENST00000573955 IFIT1BQ5T764 474 aaKnown RBP18.41■□□□□ 0.54
USP43-204ENST00000573955 FSIP1Q8NA03 581 aa18.41■□□□□ 0.54
USP43-204ENST00000573955 FBXO41Q8TF61 875 aa18.41■□□□□ 0.54
USP43-204ENST00000573955 RTEL1Q9NZ71 1219 aa18.41■□□□□ 0.54
USP43-204ENST00000573955 DUOX1Q9NRD9 1551 aa18.41■□□□□ 0.54
USP43-204ENST00000573955 LOC102724159A0A0B4J2E5 919 aa18.4■□□□□ 0.54
USP43-204ENST00000573955 RIMBP2O15034 1052 aa18.4■□□□□ 0.54
USP43-204ENST00000573955 FMNL1O95466 1100 aaPredicted RBP18.4■□□□□ 0.54
USP43-204ENST00000573955 TYRO3Q06418 890 aa18.4■□□□□ 0.54
USP43-204ENST00000573955 PWP2Q15269 919 aaKnown RBP18.4■□□□□ 0.54
USP43-204ENST00000573955 BRAPQ7Z569 592 aa18.4■□□□□ 0.54
USP43-204ENST00000573955 LINC00301Q8NCQ3 95 aa18.4■□□□□ 0.54
USP43-204ENST00000573955 IFNAR1P17181 557 aa18.4■□□□□ 0.54
USP43-204ENST00000573955 CCDC73Q6ZRK6 1079 aa18.4■□□□□ 0.54
USP43-204ENST00000573955 IQCA1Q86XH1 822 aa18.4■□□□□ 0.54
USP43-204ENST00000573955 TMTC2Q8N394 836 aa18.4■□□□□ 0.54
USP43-204ENST00000573955 PIBF1Q8WXW3 757 aa18.4■□□□□ 0.54
USP43-204ENST00000573955 ERCC4Q92889 916 aaPredicted RBP18.4■□□□□ 0.54
USP43-204ENST00000573955 FEZ2Q9UHY8 353 aaPredicted RBP18.4■□□□□ 0.54
USP43-204ENST00000573955 A0A1B0GVL5 298 aa18.39■□□□□ 0.54
USP43-204ENST00000573955 ATP2B4P23634 1241 aa18.39■□□□□ 0.54
USP43-204ENST00000573955 MARCKSP29966 332 aaPredicted RBP18.39■□□□□ 0.54
USP43-204ENST00000573955 NOLC1Q14978 699 aaKnown RBP eCLIP18.39■□□□□ 0.54
USP43-204ENST00000573955 ATL3Q6DD88 541 aa18.39■□□□□ 0.54
USP43-204ENST00000573955 TRIM22Q8IYM9 498 aa18.39■□□□□ 0.54
USP43-204ENST00000573955 TBC1D16Q8TBP0 767 aa18.39■□□□□ 0.54
USP43-204ENST00000573955 FBXW7Q969H0 707 aa18.39■□□□□ 0.54
USP43-204ENST00000573955 ATP8A2Q9NTI2 1148 aa18.39■□□□□ 0.54
USP43-204ENST00000573955 CCDC88AQ3V6T2 1871 aa18.39■□□□□ 0.54
USP43-204ENST00000573955 ECM29Q5VYK3 1845 aa18.39■□□□□ 0.53
USP43-204ENST00000573955 TGFBRAP1Q8WUH2 860 aa18.39■□□□□ 0.53
USP43-204ENST00000573955 DYNLL2Q96FJ2 89 aa18.39■□□□□ 0.53
USP43-204ENST00000573955 MRVI1Q9Y6F6 885 aa18.39■□□□□ 0.53
USP43-204ENST00000573955 A0A087WWV3 80 aa18.38■□□□□ 0.53
USP43-204ENST00000573955 BBOX1O75936 387 aa18.38■□□□□ 0.53
USP43-204ENST00000573955 SAP30BPQ9UHR5 308 aaKnown RBP18.38■□□□□ 0.53
USP43-204ENST00000573955 SPTLC2O15270 562 aa18.38■□□□□ 0.53
USP43-204ENST00000573955 ANO1Q5XXA6 986 aa18.38■□□□□ 0.53
USP43-204ENST00000573955 ARPP21Q9UBL0 812 aaPredicted RBP18.38■□□□□ 0.53
USP43-204ENST00000573955 TSPY2A6NKD2 308 aa18.37■□□□□ 0.53
USP43-204ENST00000573955 PPEF1O14829 653 aaPredicted RBP18.37■□□□□ 0.53
USP43-204ENST00000573955 SNW1Q13573 536 aaKnown RBP18.37■□□□□ 0.53
USP43-204ENST00000573955 ANO6Q4KMQ2 910 aa18.37■□□□□ 0.53
USP43-204ENST00000573955 NBPF11Q86T75 865 aa18.37■□□□□ 0.53
USP43-204ENST00000573955 MAPKAPK5Q8IW41 473 aa18.37■□□□□ 0.53
USP43-204ENST00000573955 CRACR2BQ8N4Y2 399 aaPredicted RBP18.37■□□□□ 0.53
USP43-204ENST00000573955 POLR3EQ9NVU0 708 aa18.37■□□□□ 0.53
USP43-204ENST00000573955 ERICH4A6NGS2 130 aa18.37■□□□□ 0.53
USP43-204ENST00000573955 BTBD18B2RXH4 712 aa18.37■□□□□ 0.53
USP43-204ENST00000573955 PLEKHA8P1O95397 391 aa18.37■□□□□ 0.53
USP43-204ENST00000573955 MFSD14BQ5SR56 506 aa18.37■□□□□ 0.53
USP43-204ENST00000573955 CATIPQ7Z7H3 387 aa18.37■□□□□ 0.53
USP43-204ENST00000573955 LUZP1Q86V48 1076 aa18.37■□□□□ 0.53
USP43-204ENST00000573955 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.37■□□□□ 0.53
USP43-204ENST00000573955 TRERF1Q96PN7 1200 aa18.36■□□□□ 0.53
USP43-204ENST00000573955 CAMKK2Q96RR4 588 aa18.36■□□□□ 0.53
USP43-204ENST00000573955 NOL10Q9BSC4 688 aaKnown RBP18.36■□□□□ 0.53
USP43-204ENST00000573955 CCDC196A0A1B0GTZ2 297 aa18.36■□□□□ 0.53
USP43-204ENST00000573955 KINO60870 393 aaKnown RBP18.36■□□□□ 0.53
USP43-204ENST00000573955 HOXA10P31260 410 aaPredicted RBP18.36■□□□□ 0.53
USP43-204ENST00000573955 MRPS27Q92552 414 aaKnown RBP18.36■□□□□ 0.53
USP43-204ENST00000573955 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.36■□□□□ 0.53
USP43-204ENST00000573955 TNS1Q9HBL0 1735 aaKnown RBP18.36■□□□□ 0.53
USP43-204ENST00000573955 STK36Q9NRP7 1315 aa18.36■□□□□ 0.53
USP43-204ENST00000573955 MAST2Q6P0Q8 1798 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms