RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 GINM1Q9NU53 330 aa17.43■□□□□ 0.38
TVP23A-208ENST00000573857 ZBTB21Q9ULJ3 1066 aa17.43■□□□□ 0.38
TVP23A-208ENST00000573857 CEP290O15078 2479 aa17.43■□□□□ 0.38
TVP23A-208ENST00000573857 CDK5RAP2Q96SN8 1893 aa17.42■□□□□ 0.38
TVP23A-208ENST00000573857 GDF11O95390 407 aa17.42■□□□□ 0.38
TVP23A-208ENST00000573857 INHAP05111 366 aa17.42■□□□□ 0.38
TVP23A-208ENST00000573857 MAP3K12Q12852 859 aa17.42■□□□□ 0.38
TVP23A-208ENST00000573857 HABP4Q5JVS0 413 aaKnown RBP17.42■□□□□ 0.38
TVP23A-208ENST00000573857 TMED8Q6PL24 325 aaPredicted RBP17.42■□□□□ 0.38
TVP23A-208ENST00000573857 UNC93B1Q9H1C4 597 aa17.42■□□□□ 0.38
TVP23A-208ENST00000573857 IL1RAPL2Q9NP60 686 aa17.42■□□□□ 0.38
TVP23A-208ENST00000573857 TMOD4Q9NZQ9 345 aa17.42■□□□□ 0.38
TVP23A-208ENST00000573857 HOXA7P31268 230 aaPredicted RBP17.41■□□□□ 0.38
TVP23A-208ENST00000573857 USP5P45974 858 aa17.41■□□□□ 0.38
TVP23A-208ENST00000573857 UBE2Q1Q7Z7E8 422 aa17.41■□□□□ 0.38
TVP23A-208ENST00000573857 RHPN1Q8TCX5 695 aa17.41■□□□□ 0.38
TVP23A-208ENST00000573857 U2AF1L4Q8WU68 220 aaKnown RBP17.41■□□□□ 0.38
TVP23A-208ENST00000573857 C19orf81C9J6K1 198 aa17.4■□□□□ 0.38
TVP23A-208ENST00000573857 USP17L10C9JJH3 530 aa17.4■□□□□ 0.38
TVP23A-208ENST00000573857 IRX3P78415 501 aaPredicted RBP17.4■□□□□ 0.38
TVP23A-208ENST00000573857 MORF4L1Q9UBU8 362 aa17.4■□□□□ 0.38
TVP23A-208ENST00000573857 TAOK2Q9UL54 1235 aa17.4■□□□□ 0.38
TVP23A-208ENST00000573857 SIRT2Q8IXJ6 389 aa17.39■□□□□ 0.37
TVP23A-208ENST00000573857 RPAP2Q8IXW5 612 aaPredicted RBP17.39■□□□□ 0.37
TVP23A-208ENST00000573857 CLASRPQ8N2M8 674 aaKnown RBP17.39■□□□□ 0.37
TVP23A-208ENST00000573857 KIF1BPQ96EK5 621 aa17.39■□□□□ 0.37
TVP23A-208ENST00000573857 EHD4Q9H223 541 aa17.39■□□□□ 0.37
TVP23A-208ENST00000573857 ZBTB40Q9NUA8 1239 aa17.39■□□□□ 0.37
TVP23A-208ENST00000573857 PCDH10Q9P2E7 1040 aa17.39■□□□□ 0.37
TVP23A-208ENST00000573857 SERPINB13Q9UIV8 391 aa17.39■□□□□ 0.37
TVP23A-208ENST00000573857 DDX19BQ9UMR2 479 aa17.39■□□□□ 0.37
TVP23A-208ENST00000573857 H0YGN5 161 aa17.38■□□□□ 0.37
TVP23A-208ENST00000573857 APBB1O00213 710 aa17.38■□□□□ 0.37
TVP23A-208ENST00000573857 HMMRO75330 724 aa17.38■□□□□ 0.37
TVP23A-208ENST00000573857 SGPL1O95470 568 aa17.38■□□□□ 0.37
TVP23A-208ENST00000573857 GH2P01242 217 aa17.38■□□□□ 0.37
TVP23A-208ENST00000573857 HERVK_113P62684 666 aa17.38■□□□□ 0.37
TVP23A-208ENST00000573857 TTF1Q15361 905 aaPredicted RBP17.38■□□□□ 0.37
TVP23A-208ENST00000573857 TATDN1Q6P1N9 297 aa17.38■□□□□ 0.37
TVP23A-208ENST00000573857 P2RX7Q99572 595 aaKnown RBP17.38■□□□□ 0.37
TVP23A-208ENST00000573857 RIOK1Q9BRS2 568 aaKnown RBP17.38■□□□□ 0.37
TVP23A-208ENST00000573857 COG6Q9Y2V7 657 aa17.38■□□□□ 0.37
TVP23A-208ENST00000573857 FARP2O94887 1054 aaPredicted RBP17.37■□□□□ 0.37
TVP23A-208ENST00000573857 TTC6Q86TZ1 520 aa17.37■□□□□ 0.37
TVP23A-208ENST00000573857 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.37■□□□□ 0.37
TVP23A-208ENST00000573857 TXNRD2Q9NNW7 524 aa17.37■□□□□ 0.37
TVP23A-208ENST00000573857 PAK6Q9NQU5 681 aaPredicted RBP17.37■□□□□ 0.37
TVP23A-208ENST00000573857 GJD2Q9UKL4 321 aa17.37■□□□□ 0.37
TVP23A-208ENST00000573857 DOCK3Q8IZD9 2030 aa17.37■□□□□ 0.37
TVP23A-208ENST00000573857 MAGEB6P1A0A0J9YX57 407 aa17.36■□□□□ 0.37
TVP23A-208ENST00000573857 IFIT2P09913 472 aaKnown RBP17.36■□□□□ 0.37
TVP23A-208ENST00000573857 PDE6AP16499 860 aa17.36■□□□□ 0.37
TVP23A-208ENST00000573857 SLC9C2Q5TAH2 1124 aa17.36■□□□□ 0.37
TVP23A-208ENST00000573857 USP17L2Q6R6M4 530 aa17.36■□□□□ 0.37
TVP23A-208ENST00000573857 DPF3Q92784 378 aa17.36■□□□□ 0.37
TVP23A-208ENST00000573857 DEFB118Q96PH6 123 aa17.36■□□□□ 0.37
TVP23A-208ENST00000573857 HTATIP2Q9BUP3 242 aa17.36■□□□□ 0.37
TVP23A-208ENST00000573857 EMILIN3Q9NT22 766 aa17.36■□□□□ 0.37
TVP23A-208ENST00000573857 COLQQ9Y215 455 aaPredicted RBP17.36■□□□□ 0.37
TVP23A-208ENST00000573857 GOLIM4O00461 696 aa17.35■□□□□ 0.37
TVP23A-208ENST00000573857 PEX10O60683 326 aa17.35■□□□□ 0.37
TVP23A-208ENST00000573857 RAB11FIP3O75154 756 aa17.35■□□□□ 0.37
TVP23A-208ENST00000573857 HMGCRP04035 888 aa17.35■□□□□ 0.37
TVP23A-208ENST00000573857 CAPN2P17655 700 aa17.35■□□□□ 0.37
TVP23A-208ENST00000573857 PLCD1P51178 756 aa17.35■□□□□ 0.37
TVP23A-208ENST00000573857 GPRC5AQ8NFJ5 357 aa17.35■□□□□ 0.37
TVP23A-208ENST00000573857 DNAJC2Q99543 621 aaKnown RBP17.35■□□□□ 0.37
TVP23A-208ENST00000573857 RCAN3Q9UKA8 241 aa17.35■□□□□ 0.37
TVP23A-208ENST00000573857 MYH1P12882 1939 aa17.35■□□□□ 0.37
TVP23A-208ENST00000573857 TCRBV5S4A2TA0A5A2 114 aa17.34■□□□□ 0.37
TVP23A-208ENST00000573857 TFRCP02786 760 aaKnown RBP17.34■□□□□ 0.37
TVP23A-208ENST00000573857 RAB3GAP1Q15042 981 aa17.34■□□□□ 0.37
TVP23A-208ENST00000573857 CERKLQ49MI3 558 aaPredicted RBP17.34■□□□□ 0.37
TVP23A-208ENST00000573857 DDX60LQ5H9U9 1706 aaKnown RBP17.34■□□□□ 0.37
TVP23A-208ENST00000573857 GTF3C2Q8WUA4 911 aaPredicted RBP17.34■□□□□ 0.37
TVP23A-208ENST00000573857 C12orf42Q96LP6 360 aa17.34■□□□□ 0.37
TVP23A-208ENST00000573857 FEZ1Q99689 392 aa17.34■□□□□ 0.37
TVP23A-208ENST00000573857 CRNKL1Q9BZJ0 848 aaKnown RBP17.34■□□□□ 0.37
TVP23A-208ENST00000573857 CRISPLD2Q9H0B8 497 aa17.34■□□□□ 0.37
TVP23A-208ENST00000573857 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.34■□□□□ 0.37
TVP23A-208ENST00000573857 ZNF532Q9HCE3 1301 aa17.34■□□□□ 0.37
TVP23A-208ENST00000573857 RBPJLQ9UBG7 517 aa17.34■□□□□ 0.37
TVP23A-208ENST00000573857 SHMT1P34896 483 aa17.33■□□□□ 0.36
TVP23A-208ENST00000573857 ERVK-9P63128 1117 aa17.33■□□□□ 0.36
TVP23A-208ENST00000573857 ERVK-24P63145 666 aa17.33■□□□□ 0.36
TVP23A-208ENST00000573857 ZYXQ15942 572 aaKnown RBP17.33■□□□□ 0.36
TVP23A-208ENST00000573857 ABCB5Q2M3G0 1257 aa17.33■□□□□ 0.36
TVP23A-208ENST00000573857 POTEEQ6S8J3 1075 aa17.33■□□□□ 0.36
TVP23A-208ENST00000573857 SOCS4Q8WXH5 440 aa17.33■□□□□ 0.36
TVP23A-208ENST00000573857 BCL11AQ9H165 835 aa17.33■□□□□ 0.36
TVP23A-208ENST00000573857 CHMP4BQ9H444 224 aaKnown RBP17.33■□□□□ 0.36
TVP23A-208ENST00000573857 TRIOBPQ9H2D6 2365 aa17.32■□□□□ 0.36
TVP23A-208ENST00000573857 POLR3DP05423 398 aaPredicted RBP17.32■□□□□ 0.36
TVP23A-208ENST00000573857 MAPK4P31152 587 aa17.32■□□□□ 0.36
TVP23A-208ENST00000573857 FXR1P51114 621 aaKnown RBP eCLIP17.32■□□□□ 0.36
TVP23A-208ENST00000573857 USP14P54578 494 aa17.32■□□□□ 0.36
TVP23A-208ENST00000573857 GABPAQ06546 454 aa17.32■□□□□ 0.36
TVP23A-208ENST00000573857 TRIM32Q13049 653 aa17.32■□□□□ 0.36
TVP23A-208ENST00000573857 TRIB2Q92519 343 aa17.32■□□□□ 0.36
TVP23A-208ENST00000573857 EDC3Q96F86 508 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms