RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 STAG1Q8WVM7 1258 aa21.79■■□□□ 1.08
SCARF1-206ENST00000573852 CSRNP2Q9H175 543 aa21.79■■□□□ 1.08
SCARF1-206ENST00000573852 TIAM2Q8IVF5 1701 aa21.79■■□□□ 1.08
SCARF1-206ENST00000573852 GOLGA6L9A6NEM1 432 aa21.79■■□□□ 1.08
SCARF1-206ENST00000573852 NUTM2AQ8IVF1 878 aaPredicted RBP21.79■■□□□ 1.08
SCARF1-206ENST00000573852 KIFC2Q96AC6 838 aa21.79■■□□□ 1.08
SCARF1-206ENST00000573852 RAI14Q9P0K7 980 aa21.79■■□□□ 1.08
SCARF1-206ENST00000573852 TDO2P48775 406 aa21.78■■□□□ 1.08
SCARF1-206ENST00000573852 EVA1CP58658 441 aa21.78■■□□□ 1.08
SCARF1-206ENST00000573852 TRIML1Q8N9V2 468 aa21.78■■□□□ 1.08
SCARF1-206ENST00000573852 SPATA20Q8TB22 786 aa21.78■■□□□ 1.08
SCARF1-206ENST00000573852 CABP5Q9NP86 173 aa21.78■■□□□ 1.08
SCARF1-206ENST00000573852 ZBTB1Q9Y2K1 713 aa21.78■■□□□ 1.08
SCARF1-206ENST00000573852 MRFAP1Q9Y605 127 aa21.78■■□□□ 1.08
SCARF1-206ENST00000573852 SLC4A4Q9Y6R1 1079 aa21.78■■□□□ 1.08
SCARF1-206ENST00000573852 MROH5Q6ZUA9 1318 aa21.78■■□□□ 1.08
SCARF1-206ENST00000573852 ANKRD36CQ5JPF3 1778 aa21.78■■□□□ 1.08
SCARF1-206ENST00000573852 DOCK2Q92608 1830 aa21.78■■□□□ 1.08
SCARF1-206ENST00000573852 CYP19A1P11511 503 aaPredicted RBP21.78■■□□□ 1.08
SCARF1-206ENST00000573852 MTF1Q14872 753 aa21.78■■□□□ 1.08
SCARF1-206ENST00000573852 PLCD1P51178 756 aa21.77■■□□□ 1.08
SCARF1-206ENST00000573852 NUP133Q8WUM0 1156 aa21.77■■□□□ 1.08
SCARF1-206ENST00000573852 SHISA4Q96DD7 197 aa21.77■■□□□ 1.08
SCARF1-206ENST00000573852 TPM1P09493 284 aa21.77■■□□□ 1.08
SCARF1-206ENST00000573852 SLC5A1P13866 664 aa21.77■■□□□ 1.08
SCARF1-206ENST00000573852 SART3Q15020 963 aaKnown RBP21.77■■□□□ 1.08
SCARF1-206ENST00000573852 TAF3Q5VWG9 929 aa21.77■■□□□ 1.08
SCARF1-206ENST00000573852 FANCBQ8NB91 859 aa21.77■■□□□ 1.08
SCARF1-206ENST00000573852 NUP98P52948 1817 aa21.76■■□□□ 1.07
SCARF1-206ENST00000573852 FAM205CA6NFA0 338 aa21.76■■□□□ 1.07
SCARF1-206ENST00000573852 ERICH4A6NGS2 130 aa21.76■■□□□ 1.07
SCARF1-206ENST00000573852 TEX33O43247 280 aa21.76■■□□□ 1.07
SCARF1-206ENST00000573852 PPP2R3AQ06190 1150 aa21.76■■□□□ 1.07
SCARF1-206ENST00000573852 KARSQ15046 597 aaKnown RBP21.76■■□□□ 1.07
SCARF1-206ENST00000573852 ARAP2Q8WZ64 1704 aa21.76■■□□□ 1.07
SCARF1-206ENST00000573852 A0A087X0B3 334 aa21.76■■□□□ 1.07
SCARF1-206ENST00000573852 A0A1B0GTH6 734 aa21.76■■□□□ 1.07
SCARF1-206ENST00000573852 FAM193AP78312 1265 aa21.76■■□□□ 1.07
SCARF1-206ENST00000573852 KANK3Q6NY19 840 aa21.76■■□□□ 1.07
SCARF1-206ENST00000573852 APTXQ7Z2E3 356 aaKnown RBP21.76■■□□□ 1.07
SCARF1-206ENST00000573852 ZNF654Q8IZM8 581 aa21.76■■□□□ 1.07
SCARF1-206ENST00000573852 MRPL44Q9H9J2 332 aaKnown RBP21.76■■□□□ 1.07
SCARF1-206ENST00000573852 RSRC2Q7L4I2 434 aaKnown RBP21.75■■□□□ 1.07
SCARF1-206ENST00000573852 MIGA1Q8NAN2 632 aa21.75■■□□□ 1.07
SCARF1-206ENST00000573852 NACAP1Q9BZK3 213 aa21.75■■□□□ 1.07
SCARF1-206ENST00000573852 ERICH2A1L162 156 aa21.75■■□□□ 1.07
SCARF1-206ENST00000573852 SASH3O75995 380 aa21.75■■□□□ 1.07
SCARF1-206ENST00000573852 TEX35Q5T0J7 233 aa21.75■■□□□ 1.07
SCARF1-206ENST00000573852 DHX58Q96C10 678 aa21.75■■□□□ 1.07
SCARF1-206ENST00000573852 IRX2Q9BZI1 471 aaPredicted RBP21.75■■□□□ 1.07
SCARF1-206ENST00000573852 CEP131Q9UPN4 1083 aa21.75■■□□□ 1.07
SCARF1-206ENST00000573852 CCDC196A0A1B0GTZ2 297 aa21.74■■□□□ 1.07
SCARF1-206ENST00000573852 ERCC5P28715 1186 aaPredicted RBP21.74■■□□□ 1.07
SCARF1-206ENST00000573852 GPR161Q8N6U8 529 aaKnown RBP21.74■■□□□ 1.07
SCARF1-206ENST00000573852 EPSTI1Q96J88 318 aa21.74■■□□□ 1.07
SCARF1-206ENST00000573852 LRP5O75197 1615 aa21.74■■□□□ 1.07
SCARF1-206ENST00000573852 SOWAHDA6NJG2 315 aa21.74■■□□□ 1.07
SCARF1-206ENST00000573852 TBC1D8O95759 1140 aa21.74■■□□□ 1.07
SCARF1-206ENST00000573852 CD44P16070 742 aaKnown RBP21.74■■□□□ 1.07
SCARF1-206ENST00000573852 CASP1P29466 404 aa21.74■■□□□ 1.07
SCARF1-206ENST00000573852 BCAMP50895 628 aa21.74■■□□□ 1.07
SCARF1-206ENST00000573852 CC2D1AQ6P1N0 951 aaPredicted RBP21.74■■□□□ 1.07
SCARF1-206ENST00000573852 PNPLA7Q6ZV29 1317 aa21.74■■□□□ 1.07
SCARF1-206ENST00000573852 EARS2Q5JPH6 523 aaKnown RBP21.73■■□□□ 1.07
SCARF1-206ENST00000573852 TMTC2Q8N394 836 aa21.73■■□□□ 1.07
SCARF1-206ENST00000573852 ITGB4P16144 1822 aa21.73■■□□□ 1.07
SCARF1-206ENST00000573852 AKR1B15C9JRZ8 316 aaPredicted RBP21.73■■□□□ 1.07
SCARF1-206ENST00000573852 GNAT2P19087 354 aa21.73■■□□□ 1.07
SCARF1-206ENST00000573852 CYP2C19P33261 490 aa21.73■■□□□ 1.07
SCARF1-206ENST00000573852 AFMP43652 599 aa21.73■■□□□ 1.07
SCARF1-206ENST00000573852 CREBRFQ8IUR6 639 aa21.73■■□□□ 1.07
SCARF1-206ENST00000573852 SLIT2O94813 1529 aa21.73■■□□□ 1.07
SCARF1-206ENST00000573852 SMIM22K7EJ46 135 aa21.73■■□□□ 1.07
SCARF1-206ENST00000573852 STX17P56962 302 aa21.73■■□□□ 1.07
SCARF1-206ENST00000573852 KLHL10Q6JEL2 608 aa21.73■■□□□ 1.07
SCARF1-206ENST00000573852 DZIP3Q86Y13 1208 aaKnown RBP21.73■■□□□ 1.07
SCARF1-206ENST00000573852 ZNF34Q8IZ26 560 aa21.73■■□□□ 1.07
SCARF1-206ENST00000573852 BCORQ6W2J9 1755 aa21.72■■□□□ 1.07
SCARF1-206ENST00000573852 MYH6P13533 1939 aa21.72■■□□□ 1.07
SCARF1-206ENST00000573852 KAT6BQ8WYB5 2073 aa21.72■■□□□ 1.07
SCARF1-206ENST00000573852 A0A0U1RQJ8 604 aa21.72■■□□□ 1.07
SCARF1-206ENST00000573852 CCDC66A2RUB6 948 aa21.72■■□□□ 1.07
SCARF1-206ENST00000573852 POLR3GO15318 223 aaPredicted RBP21.72■■□□□ 1.07
SCARF1-206ENST00000573852 RAD9BQ6WBX8 426 aa21.72■■□□□ 1.07
SCARF1-206ENST00000573852 CCDC12Q8WUD4 166 aaPredicted RBP21.72■■□□□ 1.07
SCARF1-206ENST00000573852 ATRIPQ8WXE1 791 aa21.72■■□□□ 1.07
SCARF1-206ENST00000573852 PANX2Q96RD6 677 aa21.72■■□□□ 1.07
SCARF1-206ENST00000573852 UBXN6Q9BZV1 441 aa21.72■■□□□ 1.07
SCARF1-206ENST00000573852 AATFQ9NY61 560 aaKnown RBP eCLIP21.72■■□□□ 1.07
SCARF1-206ENST00000573852 VPS54Q9P1Q0 977 aa21.72■■□□□ 1.07
SCARF1-206ENST00000573852 SOS2Q07890 1332 aaPredicted RBP21.72■■□□□ 1.07
SCARF1-206ENST00000573852 ATP8B1O43520 1251 aa21.72■■□□□ 1.07
SCARF1-206ENST00000573852 RBL2Q08999 1139 aa21.72■■□□□ 1.07
SCARF1-206ENST00000573852 CUL4BQ13620 913 aa21.72■■□□□ 1.07
SCARF1-206ENST00000573852 PARD6BQ9BYG5 372 aa21.72■■□□□ 1.07
SCARF1-206ENST00000573852 hCG_1642624A0A1W2PR95 340 aa21.71■■□□□ 1.07
SCARF1-206ENST00000573852 TRIM75PA6NK02 468 aa21.71■■□□□ 1.07
SCARF1-206ENST00000573852 PPARAQ07869 468 aa21.71■■□□□ 1.07
SCARF1-206ENST00000573852 SPATA1Q5VX52 437 aa21.71■■□□□ 1.07
SCARF1-206ENST00000573852 CPLX3Q8WVH0 158 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms