RNA–Protein interactions for RNA: ENST00000573607.5

TOM1L1-216, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-216ENST00000573607 NLRC3Q7RTR2 1065 aa9.13□□□□□ -0.95
TOM1L1-216ENST00000573607 TTC6Q86TZ1 520 aa9.13□□□□□ -0.95
TOM1L1-216ENST00000573607 HID1Q8IV36 788 aa9.13□□□□□ -0.95
TOM1L1-216ENST00000573607 SLC9A7Q96T83 725 aa9.13□□□□□ -0.95
TOM1L1-216ENST00000573607 CNNM2Q9H8M5 875 aa9.13□□□□□ -0.95
TOM1L1-216ENST00000573607 SSU72Q9NP77 194 aaKnown RBP9.13□□□□□ -0.95
TOM1L1-216ENST00000573607 RBAK-RBAKDNI3L0D1 243 aa9.12□□□□□ -0.95
TOM1L1-216ENST00000573607 SART1O43290 800 aaKnown RBP9.12□□□□□ -0.95
TOM1L1-216ENST00000573607 GUCY2CP25092 1073 aa9.12□□□□□ -0.95
TOM1L1-216ENST00000573607 CASP7P55210 303 aa9.12□□□□□ -0.95
TOM1L1-216ENST00000573607 ADGRE1Q14246 886 aa9.12□□□□□ -0.95
TOM1L1-216ENST00000573607 SGO2Q562F6 1265 aa9.12□□□□□ -0.95
TOM1L1-216ENST00000573607 LARP1BQ659C4 914 aaKnown RBP9.12□□□□□ -0.95
TOM1L1-216ENST00000573607 GIMAP6Q6P9H5 292 aa9.12□□□□□ -0.95
TOM1L1-216ENST00000573607 CDC37L1Q7L3B6 337 aa9.12□□□□□ -0.95
TOM1L1-216ENST00000573607 SMYD4Q8IYR2 804 aaPredicted RBP9.12□□□□□ -0.95
TOM1L1-216ENST00000573607 MEGF10Q96KG7 1140 aa9.12□□□□□ -0.95
TOM1L1-216ENST00000573607 TM9SF2Q99805 663 aa9.12□□□□□ -0.95
TOM1L1-216ENST00000573607 NRG1Q02297 640 aaPredicted RBP9.11□□□□□ -0.95
TOM1L1-216ENST00000573607 NBPF6Q5VWK0 638 aa9.11□□□□□ -0.95
TOM1L1-216ENST00000573607 CDCP2Q5VXM1 449 aa9.11□□□□□ -0.95
TOM1L1-216ENST00000573607 UNC5AQ6ZN44 842 aa9.11□□□□□ -0.95
TOM1L1-216ENST00000573607 MRPL41Q8IXM3 137 aaKnown RBP9.11□□□□□ -0.95
TOM1L1-216ENST00000573607 XAGE3Q8WTP9 111 aa9.11□□□□□ -0.95
TOM1L1-216ENST00000573607 FBLIM1Q8WUP2 373 aa9.11□□□□□ -0.95
TOM1L1-216ENST00000573607 FAM46AQ96IP4 442 aaKnown RBP9.11□□□□□ -0.95
TOM1L1-216ENST00000573607 NBPF4Q96M43 638 aa9.11□□□□□ -0.95
TOM1L1-216ENST00000573607 NACC1Q96RE7 527 aa9.11□□□□□ -0.95
TOM1L1-216ENST00000573607 ACSS3Q9H6R3 686 aa9.11□□□□□ -0.95
TOM1L1-216ENST00000573607 LTBP3Q9NS15 1303 aa9.1□□□□□ -0.95
TOM1L1-216ENST00000573607 KRBA1A5PL33 1030 aa9.1□□□□□ -0.95
TOM1L1-216ENST00000573607 CCDC85CA6NKD9 419 aa9.1□□□□□ -0.95
TOM1L1-216ENST00000573607 B2RBV5 119 aa9.1□□□□□ -0.95
TOM1L1-216ENST00000573607 K7ELQ4 463 aaPredicted RBP9.1□□□□□ -0.95
TOM1L1-216ENST00000573607 GAS2O43903 313 aaKnown RBP9.1□□□□□ -0.95
TOM1L1-216ENST00000573607 USP11P51784 963 aa9.1□□□□□ -0.95
TOM1L1-216ENST00000573607 PRAMEF13Q5VWM6 474 aa9.1□□□□□ -0.95
TOM1L1-216ENST00000573607 SLC6A19Q695T7 634 aa9.1□□□□□ -0.95
TOM1L1-216ENST00000573607 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.1□□□□□ -0.95
TOM1L1-216ENST00000573607 KIF2CQ99661 725 aa9.1□□□□□ -0.95
TOM1L1-216ENST00000573607 CEP41Q9BYV8 373 aa9.1□□□□□ -0.95
TOM1L1-216ENST00000573607 CDK11AQ9UQ88 783 aaPredicted RBP9.1□□□□□ -0.95
TOM1L1-216ENST00000573607 DAGLAQ9Y4D2 1042 aa9.1□□□□□ -0.95
TOM1L1-216ENST00000573607 TNFRSF10CO14798 259 aa9.09□□□□□ -0.95
TOM1L1-216ENST00000573607 DYNC1LI2O43237 492 aaPredicted RBP9.09□□□□□ -0.95
TOM1L1-216ENST00000573607 NFICP08651 508 aa9.09□□□□□ -0.95
TOM1L1-216ENST00000573607 RAG1P15918 1043 aa9.09□□□□□ -0.95
TOM1L1-216ENST00000573607 CHRNA4P43681 627 aa9.09□□□□□ -0.95
TOM1L1-216ENST00000573607 ARMC10Q8N2F6 343 aa9.09□□□□□ -0.95
TOM1L1-216ENST00000573607 SEMA6CQ9H3T2 930 aa9.09□□□□□ -0.95
TOM1L1-216ENST00000573607 SIRPGQ9P1W8 387 aa9.09□□□□□ -0.95
TOM1L1-216ENST00000573607 PCDHB10Q9UN67 800 aa9.09□□□□□ -0.95
TOM1L1-216ENST00000573607 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.08□□□□□ -0.96
TOM1L1-216ENST00000573607 FAM221BA6H8Z2 402 aa9.08□□□□□ -0.96
TOM1L1-216ENST00000573607 U2SURPO15042 1029 aaKnown RBP9.08□□□□□ -0.96
TOM1L1-216ENST00000573607 SMARCA5O60264 1052 aaPredicted RBP9.08□□□□□ -0.96
TOM1L1-216ENST00000573607 YARSP54577 528 aaKnown RBP9.08□□□□□ -0.96
TOM1L1-216ENST00000573607 DDR2Q16832 855 aa9.08□□□□□ -0.96
TOM1L1-216ENST00000573607 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.08□□□□□ -0.96
TOM1L1-216ENST00000573607 SLFN12Q8IYM2 578 aa9.08□□□□□ -0.96
TOM1L1-216ENST00000573607 PHACTR4Q8IZ21 702 aa9.08□□□□□ -0.96
TOM1L1-216ENST00000573607 TAB3Q8N5C8 712 aaPredicted RBP9.08□□□□□ -0.96
TOM1L1-216ENST00000573607 C19orf47Q8N9M1 422 aaKnown RBP9.08□□□□□ -0.96
TOM1L1-216ENST00000573607 BAHD1Q8TBE0 780 aaPredicted RBP9.08□□□□□ -0.96
TOM1L1-216ENST00000573607 PCOLCE2Q9UKZ9 415 aa9.08□□□□□ -0.96
TOM1L1-216ENST00000573607 CST3P01034 146 aaPredicted RBP9.07□□□□□ -0.96
TOM1L1-216ENST00000573607 BMP3P12645 472 aa9.07□□□□□ -0.96
TOM1L1-216ENST00000573607 INTS3Q68E01 1043 aaKnown RBP9.07□□□□□ -0.96
TOM1L1-216ENST00000573607 C6orf15Q6UXA7 325 aaPredicted RBP9.07□□□□□ -0.96
TOM1L1-216ENST00000573607 ARMCX6Q7L4S7 300 aa9.07□□□□□ -0.96
TOM1L1-216ENST00000573607 TXNRD3Q86VQ6 643 aa9.07□□□□□ -0.96
TOM1L1-216ENST00000573607 DZIP1LQ8IYY4 767 aaKnown RBP9.07□□□□□ -0.96
TOM1L1-216ENST00000573607 KCT2Q8NC54 265 aa9.07□□□□□ -0.96
TOM1L1-216ENST00000573607 SRPK1Q96SB4 655 aaKnown RBP9.07□□□□□ -0.96
TOM1L1-216ENST00000573607 SNTG2Q9NY99 539 aa9.07□□□□□ -0.96
TOM1L1-216ENST00000573607 UBOX5O94941 541 aa9.06□□□□□ -0.96
TOM1L1-216ENST00000573607 GJB6O95452 261 aa9.06□□□□□ -0.96
TOM1L1-216ENST00000573607 RXRBP28702 533 aa9.06□□□□□ -0.96
TOM1L1-216ENST00000573607 RASA3Q14644 834 aa9.06□□□□□ -0.96
TOM1L1-216ENST00000573607 FXNQ16595 210 aa9.06□□□□□ -0.96
TOM1L1-216ENST00000573607 CD163Q86VB7 1156 aa9.06□□□□□ -0.96
TOM1L1-216ENST00000573607 TMEM192Q8IY95 271 aa9.06□□□□□ -0.96
TOM1L1-216ENST00000573607 UTP4Q969X6 686 aaKnown RBP9.06□□□□□ -0.96
TOM1L1-216ENST00000573607 FOXQ1Q9C009 403 aa9.06□□□□□ -0.96
TOM1L1-216ENST00000573607 MAPK8IP1Q9UQF2 711 aa9.06□□□□□ -0.96
TOM1L1-216ENST00000573607 RGS13O14921 159 aa9.05□□□□□ -0.96
TOM1L1-216ENST00000573607 DDAH1O94760 285 aa9.05□□□□□ -0.96
TOM1L1-216ENST00000573607 MAP4P27816 1152 aaKnown RBP9.05□□□□□ -0.96
TOM1L1-216ENST00000573607 CAP2P40123 477 aa9.05□□□□□ -0.96
TOM1L1-216ENST00000573607 RIN3Q8TB24 985 aa9.05□□□□□ -0.96
TOM1L1-216ENST00000573607 MKL1Q969V6 931 aa9.05□□□□□ -0.96
TOM1L1-216ENST00000573607 MYRFLQ96LU7 910 aa9.05□□□□□ -0.96
TOM1L1-216ENST00000573607 DEPDC7Q96QD5 511 aa9.05□□□□□ -0.96
TOM1L1-216ENST00000573607 MSRB2Q9Y3D2 182 aa9.05□□□□□ -0.96
TOM1L1-216ENST00000573607 C1QTNF9BB2RNN3 333 aa9.04□□□□□ -0.96
TOM1L1-216ENST00000573607 NFE2L2Q16236 605 aa9.04□□□□□ -0.96
TOM1L1-216ENST00000573607 MRM1Q6IN84 353 aaKnown RBP9.04□□□□□ -0.96
TOM1L1-216ENST00000573607 NOP9Q86U38 636 aaKnown RBP9.04□□□□□ -0.96
TOM1L1-216ENST00000573607 FAM20CQ8IXL6 584 aa9.04□□□□□ -0.96
TOM1L1-216ENST00000573607 FAM178BQ8IXR5 827 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms