RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 MROH5Q6ZUA9 1318 aa17.86■□□□□ 0.45
NUP88-207ENST00000573584 SNAP23O00161 211 aa17.86■□□□□ 0.45
NUP88-207ENST00000573584 ACTN4O43707 911 aaKnown RBP17.86■□□□□ 0.45
NUP88-207ENST00000573584 CREBRFQ8IUR6 639 aa17.86■□□□□ 0.45
NUP88-207ENST00000573584 OXER1Q8TDS5 423 aa17.86■□□□□ 0.45
NUP88-207ENST00000573584 DESI2Q9BSY9 194 aa17.86■□□□□ 0.45
NUP88-207ENST00000573584 CSRNP2Q9H175 543 aa17.86■□□□□ 0.45
NUP88-207ENST00000573584 MRFAP1Q9Y605 127 aa17.86■□□□□ 0.45
NUP88-207ENST00000573584 SLC5A1P13866 664 aa17.85■□□□□ 0.45
NUP88-207ENST00000573584 PPP2R3AQ06190 1150 aa17.85■□□□□ 0.45
NUP88-207ENST00000573584 FANCBQ8NB91 859 aa17.85■□□□□ 0.45
NUP88-207ENST00000573584 STAG1Q8WVM7 1258 aa17.85■□□□□ 0.45
NUP88-207ENST00000573584 SLC4A4Q9Y6R1 1079 aa17.85■□□□□ 0.45
NUP88-207ENST00000573584 NID2Q14112 1375 aa17.85■□□□□ 0.45
NUP88-207ENST00000573584 ERCC5P28715 1186 aaPredicted RBP17.85■□□□□ 0.45
NUP88-207ENST00000573584 PLCD1P51178 756 aa17.85■□□□□ 0.45
NUP88-207ENST00000573584 TMTC2Q8N394 836 aa17.85■□□□□ 0.45
NUP88-207ENST00000573584 SEC31BQ9NQW1 1179 aa17.85■□□□□ 0.45
NUP88-207ENST00000573584 BRINP3Q76B58 766 aa17.85■□□□□ 0.45
NUP88-207ENST00000573584 LCORLQ8N3X6 602 aa17.85■□□□□ 0.45
NUP88-207ENST00000573584 GPR161Q8N6U8 529 aaKnown RBP17.85■□□□□ 0.45
NUP88-207ENST00000573584 SPATA20Q8TB22 786 aa17.85■□□□□ 0.45
NUP88-207ENST00000573584 KIFC2Q96AC6 838 aa17.85■□□□□ 0.45
NUP88-207ENST00000573584 ECM29Q5VYK3 1845 aa17.85■□□□□ 0.45
NUP88-207ENST00000573584 TEX35Q5T0J7 233 aa17.84■□□□□ 0.45
NUP88-207ENST00000573584 LRP6O75581 1613 aa17.84■□□□□ 0.45
NUP88-207ENST00000573584 A0A1B0GTH6 734 aa17.84■□□□□ 0.45
NUP88-207ENST00000573584 ATP8B1O43520 1251 aa17.84■□□□□ 0.45
NUP88-207ENST00000573584 GNAT2P19087 354 aa17.84■□□□□ 0.45
NUP88-207ENST00000573584 KARSQ15046 597 aaKnown RBP17.84■□□□□ 0.45
NUP88-207ENST00000573584 AKR1B15C9JRZ8 316 aaPredicted RBP17.83■□□□□ 0.45
NUP88-207ENST00000573584 ZNF654Q8IZM8 581 aa17.83■□□□□ 0.45
NUP88-207ENST00000573584 DHX58Q96C10 678 aa17.83■□□□□ 0.45
NUP88-207ENST00000573584 MTF1Q14872 753 aa17.83■□□□□ 0.44
NUP88-207ENST00000573584 CC2D1AQ6P1N0 951 aaPredicted RBP17.83■□□□□ 0.44
NUP88-207ENST00000573584 CCDC34Q96HJ3 373 aa17.83■□□□□ 0.44
NUP88-207ENST00000573584 POLR3GO15318 223 aaPredicted RBP17.82■□□□□ 0.44
NUP88-207ENST00000573584 TEX33O43247 280 aa17.82■□□□□ 0.44
NUP88-207ENST00000573584 CCDC175P0C221 793 aa17.82■□□□□ 0.44
NUP88-207ENST00000573584 CYP19A1P11511 503 aaPredicted RBP17.82■□□□□ 0.44
NUP88-207ENST00000573584 KLHL10Q6JEL2 608 aa17.82■□□□□ 0.44
NUP88-207ENST00000573584 RSRC2Q7L4I2 434 aaKnown RBP17.82■□□□□ 0.44
NUP88-207ENST00000573584 MIGA1Q8NAN2 632 aa17.82■□□□□ 0.44
NUP88-207ENST00000573584 CCDC12Q8WUD4 166 aaPredicted RBP17.82■□□□□ 0.44
NUP88-207ENST00000573584 UBAC1Q9BSL1 405 aa17.82■□□□□ 0.44
NUP88-207ENST00000573584 ZBTB1Q9Y2K1 713 aa17.82■□□□□ 0.44
NUP88-207ENST00000573584 SOWAHDA6NJG2 315 aa17.82■□□□□ 0.44
NUP88-207ENST00000573584 CYP2C19P33261 490 aa17.82■□□□□ 0.44
NUP88-207ENST00000573584 AFMP43652 599 aa17.82■□□□□ 0.44
NUP88-207ENST00000573584 PANX2Q96RD6 677 aa17.82■□□□□ 0.44
NUP88-207ENST00000573584 IRX2Q9BZI1 471 aaPredicted RBP17.82■□□□□ 0.44
NUP88-207ENST00000573584 MRPL44Q9H9J2 332 aaKnown RBP17.82■□□□□ 0.44
NUP88-207ENST00000573584 TBC1D8O95759 1140 aa17.82■□□□□ 0.44
NUP88-207ENST00000573584 PPFIBP1Q86W92 1011 aa17.82■□□□□ 0.44
NUP88-207ENST00000573584 EPSTI1Q96J88 318 aa17.82■□□□□ 0.44
NUP88-207ENST00000573584 MTA3Q9BTC8 594 aa17.82■□□□□ 0.44
NUP88-207ENST00000573584 RNF41Q9H4P4 317 aaPredicted RBP17.82■□□□□ 0.44
NUP88-207ENST00000573584 TRIM75PA6NK02 468 aa17.81■□□□□ 0.44
NUP88-207ENST00000573584 SASH3O75995 380 aa17.81■□□□□ 0.44
NUP88-207ENST00000573584 STX17P56962 302 aa17.81■□□□□ 0.44
NUP88-207ENST00000573584 AKAP17AQ02040 695 aaKnown RBP17.81■□□□□ 0.44
NUP88-207ENST00000573584 SPATA1Q5VX52 437 aa17.81■□□□□ 0.44
NUP88-207ENST00000573584 CPLX3Q8WVH0 158 aa17.81■□□□□ 0.44
NUP88-207ENST00000573584 RABGGTAQ92696 567 aa17.81■□□□□ 0.44
NUP88-207ENST00000573584 PARD6BQ9BYG5 372 aa17.81■□□□□ 0.44
NUP88-207ENST00000573584 LZTFL1Q9NQ48 299 aa17.81■□□□□ 0.44
NUP88-207ENST00000573584 PNPLA7Q6ZV29 1317 aa17.81■□□□□ 0.44
NUP88-207ENST00000573584 RCAN1P53805 252 aa17.81■□□□□ 0.44
NUP88-207ENST00000573584 RBL2Q08999 1139 aa17.81■□□□□ 0.44
NUP88-207ENST00000573584 IGSF22Q8N9C0 903 aa17.81■□□□□ 0.44
NUP88-207ENST00000573584 SLC4A9Q96Q91 983 aa17.81■□□□□ 0.44
NUP88-207ENST00000573584 ARFGAP3Q9NP61 516 aa17.81■□□□□ 0.44
NUP88-207ENST00000573584 AATFQ9NY61 560 aaKnown RBP eCLIP17.81■□□□□ 0.44
NUP88-207ENST00000573584 A0A087X0B3 334 aa17.8■□□□□ 0.44
NUP88-207ENST00000573584 FAM205CA6NFA0 338 aa17.8■□□□□ 0.44
NUP88-207ENST00000573584 BCAMP50895 628 aa17.8■□□□□ 0.44
NUP88-207ENST00000573584 APTXQ7Z2E3 356 aaKnown RBP17.8■□□□□ 0.44
NUP88-207ENST00000573584 DZIP3Q86Y13 1208 aaKnown RBP17.8■□□□□ 0.44
NUP88-207ENST00000573584 GOLGA1Q92805 767 aa17.8■□□□□ 0.44
NUP88-207ENST00000573584 XBP1P17861 261 aa17.8■□□□□ 0.44
NUP88-207ENST00000573584 CT47A1Q5JQC4 288 aaPredicted RBP17.8■□□□□ 0.44
NUP88-207ENST00000573584 VPS54Q9P1Q0 977 aa17.8■□□□□ 0.44
NUP88-207ENST00000573584 LRP2BPQ9P2M1 347 aa17.8■□□□□ 0.44
NUP88-207ENST00000573584 SHANK3Q9BYB0 1731 aa17.79■□□□□ 0.44
NUP88-207ENST00000573584 TOGARAM1Q9Y4F4 1720 aa17.79■□□□□ 0.44
NUP88-207ENST00000573584 MINDY4BA8MYZ0 360 aa17.79■□□□□ 0.44
NUP88-207ENST00000573584 CD44P16070 742 aaKnown RBP17.79■□□□□ 0.44
NUP88-207ENST00000573584 CASP1P29466 404 aa17.79■□□□□ 0.44
NUP88-207ENST00000573584 PPARAQ07869 468 aa17.79■□□□□ 0.44
NUP88-207ENST00000573584 PAGE5Q96GU1 130 aa17.79■□□□□ 0.44
NUP88-207ENST00000573584 RNF26Q9BY78 433 aaPredicted RBP17.79■□□□□ 0.44
NUP88-207ENST00000573584 ADGRG1Q9Y653 693 aa17.79■□□□□ 0.44
NUP88-207ENST00000573584 ERVV-1B6SEH8 477 aa17.79■□□□□ 0.44
NUP88-207ENST00000573584 RAD9BQ6WBX8 426 aa17.79■□□□□ 0.44
NUP88-207ENST00000573584 NAA15Q9BXJ9 866 aaKnown RBP17.79■□□□□ 0.44
NUP88-207ENST00000573584 UBXN6Q9BZV1 441 aa17.79■□□□□ 0.44
NUP88-207ENST00000573584 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.79■□□□□ 0.44
NUP88-207ENST00000573584 SYNRGQ9UMZ2 1314 aa17.79■□□□□ 0.44
NUP88-207ENST00000573584 STRCP1A6NGW2 1772 aa17.78■□□□□ 0.44
NUP88-207ENST00000573584 SYMPKQ92797 1274 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms