RNA–Protein interactions for RNA: ENST00000573123.1

CXCL16-202, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS ALT2 TSL 2

Gene CXCL16, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-202ENST00000573123 SAP30BPQ9UHR5 308 aaKnown RBP21.6■■□□□ 1.05
CXCL16-202ENST00000573123 ATAD5Q96QE3 1844 aa21.59■■□□□ 1.05
CXCL16-202ENST00000573123 H0YGN5 161 aa21.59■■□□□ 1.05
CXCL16-202ENST00000573123 FARP2O94887 1054 aaPredicted RBP21.59■■□□□ 1.05
CXCL16-202ENST00000573123 GDF11O95390 407 aa21.59■■□□□ 1.05
CXCL16-202ENST00000573123 SGPL1O95470 568 aa21.59■■□□□ 1.05
CXCL16-202ENST00000573123 USP5P45974 858 aa21.59■■□□□ 1.05
CXCL16-202ENST00000573123 DYNLL1P63167 89 aaKnown RBP21.59■■□□□ 1.05
CXCL16-202ENST00000573123 AACSQ86V21 672 aa21.59■■□□□ 1.05
CXCL16-202ENST00000573123 ZBTB21Q9ULJ3 1066 aa21.59■■□□□ 1.05
CXCL16-202ENST00000573123 EXOC6BQ9Y2D4 811 aa21.59■■□□□ 1.05
CXCL16-202ENST00000573123 USP17L10C9JJH3 530 aa21.58■■□□□ 1.05
CXCL16-202ENST00000573123 HOXA7P31268 230 aaPredicted RBP21.58■■□□□ 1.05
CXCL16-202ENST00000573123 UBE2Q1Q7Z7E8 422 aa21.58■■□□□ 1.05
CXCL16-202ENST00000573123 MAGEB6Q8N7X4 407 aa21.58■■□□□ 1.05
CXCL16-202ENST00000573123 MORF4L1Q9UBU8 362 aa21.58■■□□□ 1.05
CXCL16-202ENST00000573123 SIPA1L1O43166 1804 aa21.57■■□□□ 1.04
CXCL16-202ENST00000573123 MIGA1Q8NAN2 632 aa21.57■■□□□ 1.04
CXCL16-202ENST00000573123 PANK1Q8TE04 598 aa21.57■■□□□ 1.04
CXCL16-202ENST00000573123 GTF3C2Q8WUA4 911 aaPredicted RBP21.57■■□□□ 1.04
CXCL16-202ENST00000573123 COLQQ9Y215 455 aaPredicted RBP21.57■■□□□ 1.04
CXCL16-202ENST00000573123 TFRCP02786 760 aaKnown RBP21.56■■□□□ 1.04
CXCL16-202ENST00000573123 HMGCRP04035 888 aa21.56■■□□□ 1.04
CXCL16-202ENST00000573123 DEFB118Q96PH6 123 aa21.56■■□□□ 1.04
CXCL16-202ENST00000573123 NR2E3Q9Y5X4 410 aa21.56■■□□□ 1.04
CXCL16-202ENST00000573123 TTF1Q15361 905 aaPredicted RBP21.55■■□□□ 1.04
CXCL16-202ENST00000573123 TTC6Q86TZ1 520 aa21.55■■□□□ 1.04
CXCL16-202ENST00000573123 EHD4Q9H223 541 aa21.55■■□□□ 1.04
CXCL16-202ENST00000573123 PAK6Q9NQU5 681 aaPredicted RBP21.55■■□□□ 1.04
CXCL16-202ENST00000573123 FOCADQ5VW36 1801 aa21.55■■□□□ 1.04
CXCL16-202ENST00000573123 HMMRO75330 724 aa21.54■■□□□ 1.04
CXCL16-202ENST00000573123 HERVK_113P62684 666 aa21.54■■□□□ 1.04
CXCL16-202ENST00000573123 JAG1P78504 1218 aa21.54■■□□□ 1.04
CXCL16-202ENST00000573123 USP17L2Q6R6M4 530 aa21.54■■□□□ 1.04
CXCL16-202ENST00000573123 GPRC5AQ8NFJ5 357 aa21.54■■□□□ 1.04
CXCL16-202ENST00000573123 RHPN1Q8TCX5 695 aa21.54■■□□□ 1.04
CXCL16-202ENST00000573123 P2RX7Q99572 595 aaKnown RBP21.54■■□□□ 1.04
CXCL16-202ENST00000573123 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.54■■□□□ 1.04
CXCL16-202ENST00000573123 ANTXR1Q9H6X2 564 aa21.54■■□□□ 1.04
CXCL16-202ENST00000573123 SERPINB13Q9UIV8 391 aa21.54■■□□□ 1.04
CXCL16-202ENST00000573123 NDUFB9Q9Y6M9 179 aa21.54■■□□□ 1.04
CXCL16-202ENST00000573123 GH2P01242 217 aa21.53■■□□□ 1.04
CXCL16-202ENST00000573123 TATDN1Q6P1N9 297 aa21.53■■□□□ 1.04
CXCL16-202ENST00000573123 CLASRPQ8N2M8 674 aaKnown RBP21.53■■□□□ 1.04
CXCL16-202ENST00000573123 SOCS4Q8WXH5 440 aa21.53■■□□□ 1.04
CXCL16-202ENST00000573123 FEZ1Q99689 392 aa21.53■■□□□ 1.04
CXCL16-202ENST00000573123 IL1RAPL2Q9NP60 686 aa21.53■■□□□ 1.04
CXCL16-202ENST00000573123 GJD2Q9UKL4 321 aa21.53■■□□□ 1.04
CXCL16-202ENST00000573123 TRIOBPQ9H2D6 2365 aa21.53■■□□□ 1.04
CXCL16-202ENST00000573123 CDK5RAP2Q96SN8 1893 aa21.52■■□□□ 1.04
CXCL16-202ENST00000573123 FXR1P51114 621 aaKnown RBP eCLIP21.52■■□□□ 1.04
CXCL16-202ENST00000573123 PDE3AQ14432 1141 aa21.52■■□□□ 1.04
CXCL16-202ENST00000573123 SHROOM1Q2M3G4 852 aaPredicted RBP21.52■■□□□ 1.04
CXCL16-202ENST00000573123 CHRDL2Q6WN34 429 aa21.52■■□□□ 1.04
CXCL16-202ENST00000573123 CCAR1Q8IX12 1150 aaKnown RBP21.52■■□□□ 1.04
CXCL16-202ENST00000573123 RPAP2Q8IXW5 612 aaPredicted RBP21.52■■□□□ 1.04
CXCL16-202ENST00000573123 KIF1BPQ96EK5 621 aa21.52■■□□□ 1.04
CXCL16-202ENST00000573123 CHMP4BQ9H444 224 aaKnown RBP21.52■■□□□ 1.04
CXCL16-202ENST00000573123 DDX19BQ9UMR2 479 aa21.52■■□□□ 1.04
CXCL16-202ENST00000573123 MAPK4P31152 587 aa21.51■■□□□ 1.03
CXCL16-202ENST00000573123 USP14P54578 494 aa21.51■■□□□ 1.03
CXCL16-202ENST00000573123 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.51■■□□□ 1.03
CXCL16-202ENST00000573123 NUDT12Q9BQG2 462 aa21.51■■□□□ 1.03
CXCL16-202ENST00000573123 CRISPLD2Q9H0B8 497 aa21.51■■□□□ 1.03
CXCL16-202ENST00000573123 CABP5Q9NP86 173 aa21.51■■□□□ 1.03
CXCL16-202ENST00000573123 MYO5AQ9Y4I1 1855 aaKnown RBP21.5■■□□□ 1.03
CXCL16-202ENST00000573123 MAGEB6P1A0A0J9YX57 407 aa21.5■■□□□ 1.03
CXCL16-202ENST00000573123 IFIT2P09913 472 aaKnown RBP21.5■■□□□ 1.03
CXCL16-202ENST00000573123 CERKLQ49MI3 558 aaPredicted RBP21.5■■□□□ 1.03
CXCL16-202ENST00000573123 C12orf42Q96LP6 360 aa21.5■■□□□ 1.03
CXCL16-202ENST00000573123 RIOK1Q9BRS2 568 aaKnown RBP21.5■■□□□ 1.03
CXCL16-202ENST00000573123 CRNKL1Q9BZJ0 848 aaKnown RBP21.5■■□□□ 1.03
CXCL16-202ENST00000573123 HMX1Q9NP08 348 aaPredicted RBP21.5■■□□□ 1.03
CXCL16-202ENST00000573123 EMILIN3Q9NT22 766 aa21.5■■□□□ 1.03
CXCL16-202ENST00000573123 RPTORQ8N122 1335 aa21.5■■□□□ 1.03
CXCL16-202ENST00000573123 POLR3DP05423 398 aaPredicted RBP21.49■■□□□ 1.03
CXCL16-202ENST00000573123 ERVK-9P63128 1117 aa21.49■■□□□ 1.03
CXCL16-202ENST00000573123 ERVK-24P63145 666 aa21.49■■□□□ 1.03
CXCL16-202ENST00000573123 RAB3GAP1Q15042 981 aa21.49■■□□□ 1.03
CXCL16-202ENST00000573123 ABCB5Q2M3G0 1257 aa21.49■■□□□ 1.03
CXCL16-202ENST00000573123 SLC9C2Q5TAH2 1124 aa21.49■■□□□ 1.03
CXCL16-202ENST00000573123 TRMT44Q8IYL2 757 aaKnown RBP21.49■■□□□ 1.03
CXCL16-202ENST00000573123 ANKLE1Q8NAG6 615 aa21.49■■□□□ 1.03
CXCL16-202ENST00000573123 PAGR1Q9BTK6 254 aa21.49■■□□□ 1.03
CXCL16-202ENST00000573123 CWC22Q9HCG8 908 aaKnown RBP21.49■■□□□ 1.03
CXCL16-202ENST00000573123 TXNRD2Q9NNW7 524 aa21.49■■□□□ 1.03
CXCL16-202ENST00000573123 DOCK3Q8IZD9 2030 aa21.49■■□□□ 1.03
CXCL16-202ENST00000573123 USP17L15C9J2P7 530 aa21.48■■□□□ 1.03
CXCL16-202ENST00000573123 USP17L13C9JLJ4 530 aa21.48■■□□□ 1.03
CXCL16-202ENST00000573123 USP17L11C9JVI0 530 aa21.48■■□□□ 1.03
CXCL16-202ENST00000573123 USP17L18D6R9N7 530 aa21.48■■□□□ 1.03
CXCL16-202ENST00000573123 USP17L22D6RA61 530 aa21.48■■□□□ 1.03
CXCL16-202ENST00000573123 USP17L17D6RBQ6 530 aa21.48■■□□□ 1.03
CXCL16-202ENST00000573123 USP17L19D6RCP7 530 aa21.48■■□□□ 1.03
CXCL16-202ENST00000573123 USP17L20D6RJB6 530 aa21.48■■□□□ 1.03
CXCL16-202ENST00000573123 APBB1O00213 710 aa21.48■■□□□ 1.03
CXCL16-202ENST00000573123 EVI5O60447 810 aa21.48■■□□□ 1.03
CXCL16-202ENST00000573123 RAB11FIP3O75154 756 aa21.48■■□□□ 1.03
CXCL16-202ENST00000573123 XRCC5P13010 732 aaKnown RBP21.48■■□□□ 1.03
CXCL16-202ENST00000573123 PDE6AP16499 860 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms