RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, human

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPLOC4-208	ENST00000572351	APLP1	P51693	650 aa		11.17	□□□□□ -0.62
NPLOC4-208	ENST00000572351	HUNK	P57058	714 aa		11.17	□□□□□ -0.62
NPLOC4-208	ENST00000572351	KRT32	Q14532	448 aa		11.17	□□□□□ -0.62
NPLOC4-208	ENST00000572351	RAB3GAP1	Q15042	981 aa		11.17	□□□□□ -0.62
NPLOC4-208	ENST00000572351	CST9	Q5W186	159 aa		11.17	□□□□□ -0.62
NPLOC4-208	ENST00000572351	TATDN1	Q6P1N9	297 aa		11.17	□□□□□ -0.62
NPLOC4-208	ENST00000572351	SCYL3	Q8IZE3	742 aa		11.17	□□□□□ -0.62
NPLOC4-208	ENST00000572351	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
NPLOC4-208	ENST00000572351	ESR2	Q92731	530 aa		11.17	□□□□□ -0.62
NPLOC4-208	ENST00000572351	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.17	□□□□□ -0.62
NPLOC4-208	ENST00000572351	CCDC17	Q96LX7	622 aa		11.17	□□□□□ -0.62
NPLOC4-208	ENST00000572351	BACH2	Q9BYV9	841 aa		11.17	□□□□□ -0.62
NPLOC4-208	ENST00000572351	INCENP	Q9NQS7	918 aa		11.17	□□□□□ -0.62
NPLOC4-208	ENST00000572351	MYO5A	Q9Y4I1	1855 aa	Known RBP	11.17	□□□□□ -0.62
NPLOC4-208	ENST00000572351	NEDD4	P46934	1319 aa		11.16	□□□□□ -0.62
NPLOC4-208	ENST00000572351	PHF20L1	A8MW92	1017 aa		11.16	□□□□□ -0.62
NPLOC4-208	ENST00000572351		B4E1Z4	1266 aa		11.16	□□□□□ -0.62
NPLOC4-208	ENST00000572351		E7EWF7	191 aa		11.16	□□□□□ -0.62
NPLOC4-208	ENST00000572351	ORC4	O43929	436 aa		11.16	□□□□□ -0.62
NPLOC4-208	ENST00000572351	GH2	P01242	217 aa		11.16	□□□□□ -0.62
NPLOC4-208	ENST00000572351	ASNS	P08243	561 aa		11.16	□□□□□ -0.62
NPLOC4-208	ENST00000572351	AKR1B1	P15121	316 aa		11.16	□□□□□ -0.62
NPLOC4-208	ENST00000572351	RASA1	P20936	1047 aa		11.16	□□□□□ -0.62
NPLOC4-208	ENST00000572351	CAP2	P40123	477 aa		11.16	□□□□□ -0.62
NPLOC4-208	ENST00000572351	TFAP4	Q01664	338 aa		11.16	□□□□□ -0.62
NPLOC4-208	ENST00000572351	VGLL4	Q14135	290 aa		11.16	□□□□□ -0.62
NPLOC4-208	ENST00000572351	MAP3K11	Q16584	847 aa		11.16	□□□□□ -0.62
NPLOC4-208	ENST00000572351	FAM47A	Q5JRC9	791 aa		11.16	□□□□□ -0.62
NPLOC4-208	ENST00000572351	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.16	□□□□□ -0.62
NPLOC4-208	ENST00000572351	NCOA7	Q8NI08	942 aa		11.16	□□□□□ -0.62
NPLOC4-208	ENST00000572351	NBPF3	Q9H094	633 aa		11.16	□□□□□ -0.62
NPLOC4-208	ENST00000572351	ELP3	Q9H9T3	547 aa		11.16	□□□□□ -0.62
NPLOC4-208	ENST00000572351	ZNF112	Q9UJU3	913 aa		11.16	□□□□□ -0.62
NPLOC4-208	ENST00000572351	ZBTB21	Q9ULJ3	1066 aa		11.16	□□□□□ -0.62
NPLOC4-208	ENST00000572351	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
NPLOC4-208	ENST00000572351	KDM4A	O75164	1064 aa		11.15	□□□□□ -0.62
NPLOC4-208	ENST00000572351	FGR	P09769	529 aa		11.15	□□□□□ -0.62
NPLOC4-208	ENST00000572351	NT5C2	P49902	561 aa		11.15	□□□□□ -0.62
NPLOC4-208	ENST00000572351	ATP2B2	Q01814	1243 aa		11.15	□□□□□ -0.62
NPLOC4-208	ENST00000572351	RRP1B	Q14684	758 aa	Known RBP	11.15	□□□□□ -0.62
NPLOC4-208	ENST00000572351	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.15	□□□□□ -0.62
NPLOC4-208	ENST00000572351	TMEM179	Q6ZVK1	233 aa		11.15	□□□□□ -0.62
NPLOC4-208	ENST00000572351	RASEF	Q8IZ41	740 aa		11.15	□□□□□ -0.62
NPLOC4-208	ENST00000572351	SLC10A4	Q96EP9	437 aa		11.15	□□□□□ -0.62
NPLOC4-208	ENST00000572351	JAKMIP1	Q96N16	626 aa	Known RBP	11.15	□□□□□ -0.62
NPLOC4-208	ENST00000572351	NEK1	Q96PY6	1258 aa		11.15	□□□□□ -0.62
NPLOC4-208	ENST00000572351	UBAC1	Q9BSL1	405 aa		11.15	□□□□□ -0.62
NPLOC4-208	ENST00000572351	C22orf23	Q9BZE7	217 aa		11.15	□□□□□ -0.62
NPLOC4-208	ENST00000572351	GINM1	Q9NU53	330 aa		11.15	□□□□□ -0.62
NPLOC4-208	ENST00000572351	TAF6L	Q9Y6J9	622 aa		11.15	□□□□□ -0.62
NPLOC4-208	ENST00000572351	MYH7	P12883	1935 aa		11.15	□□□□□ -0.62
NPLOC4-208	ENST00000572351	AK9	Q5TCS8	1911 aa		11.14	□□□□□ -0.63
NPLOC4-208	ENST00000572351	UNCX	A6NJT0	531 aa		11.14	□□□□□ -0.63
NPLOC4-208	ENST00000572351	PSMA5	P28066	241 aa		11.14	□□□□□ -0.63
NPLOC4-208	ENST00000572351	NOL9	Q5SY16	702 aa	Known RBP	11.14	□□□□□ -0.63
NPLOC4-208	ENST00000572351	LDLRAD1	Q5T700	205 aa		11.14	□□□□□ -0.63
NPLOC4-208	ENST00000572351	STOX1	Q6ZVD7	989 aa		11.14	□□□□□ -0.63
NPLOC4-208	ENST00000572351	IQCA1	Q86XH1	822 aa		11.14	□□□□□ -0.63
NPLOC4-208	ENST00000572351	CLMN	Q96JQ2	1002 aa		11.14	□□□□□ -0.63
NPLOC4-208	ENST00000572351	AS3MT	Q9HBK9	375 aa		11.14	□□□□□ -0.63
NPLOC4-208	ENST00000572351	CREBZF	Q9NS37	354 aa		11.14	□□□□□ -0.63
NPLOC4-208	ENST00000572351	SNX14	Q9Y5W7	946 aa		11.14	□□□□□ -0.63
NPLOC4-208	ENST00000572351	SNCAIP	Q9Y6H5	919 aa		11.14	□□□□□ -0.63
NPLOC4-208	ENST00000572351	TLL2	Q9Y6L7	1015 aa		11.14	□□□□□ -0.63
NPLOC4-208	ENST00000572351	NAV1	Q8NEY1	1877 aa		11.14	□□□□□ -0.63
NPLOC4-208	ENST00000572351	ERICH2	A1L162	156 aa		11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	HMGB1	P09429	215 aa	Known RBP	11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	MCM5	P33992	734 aa		11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	ZNF157	P51786	506 aa	Predicted RBP	11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	ANAPC15	P60006	121 aa		11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	C1QTNF8	P60827	252 aa		11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	FGD1	P98174	961 aa		11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	ICA1	Q05084	483 aa		11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	GRM1	Q13255	1194 aa		11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	SEPT2	Q15019	361 aa		11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	SART3	Q15020	963 aa	Known RBP	11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	TSGA10IP	Q3SY00	556 aa		11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	PPP4R3B	Q5MIZ7	849 aa		11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	RGMB	Q6NW40	437 aa		11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	BLOC1S2	Q6QNY1	142 aa		11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	SAPCD2	Q86UD0	394 aa		11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	ERO1B	Q86YB8	467 aa		11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	NEDD1	Q8NHV4	660 aa		11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	KCNB2	Q92953	911 aa		11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	OPTN	Q96CV9	577 aa		11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	OTUD5	Q96G74	571 aa		11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	FEZ1	Q99689	392 aa		11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	ZKSCAN3	Q9BRR0	538 aa		11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	KANSL2	Q9H9L4	492 aa		11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	STX8	Q9UNK0	236 aa		11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	TACC3	Q9Y6A5	838 aa		11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	ZHX2	Q9Y6X8	837 aa		11.13	□□□□□ -0.63
NPLOC4-208	ENST00000572351	DDX60L	Q5H9U9	1706 aa	Known RBP	11.12	□□□□□ -0.63
NPLOC4-208	ENST00000572351	SPDYE5	A6NIY4	337 aa		11.12	□□□□□ -0.63
NPLOC4-208	ENST00000572351	TRIM75P	A6NK02	468 aa		11.12	□□□□□ -0.63
NPLOC4-208	ENST00000572351	USP17L5	A8MUK1	530 aa		11.12	□□□□□ -0.63
NPLOC4-208	ENST00000572351	PTPRA	P18433	802 aa		11.12	□□□□□ -0.63
NPLOC4-208	ENST00000572351	CAST	P20810	708 aa	Known RBP	11.12	□□□□□ -0.63
NPLOC4-208	ENST00000572351	JAG1	P78504	1218 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms