RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 ZBTB21Q9ULJ3 1066 aa16.69■□□□□ 0.26
RPAIN-211ENST00000572174 SLC45A1Q9Y2W3 748 aa16.69■□□□□ 0.26
RPAIN-211ENST00000572174 AFG3L2Q9Y4W6 797 aa16.69■□□□□ 0.26
RPAIN-211ENST00000572174 A0A0G2JLL6 359 aaPredicted RBP16.68■□□□□ 0.26
RPAIN-211ENST00000572174 SLC3A2P08195 630 aaKnown RBP16.68■□□□□ 0.26
RPAIN-211ENST00000572174 PABPC4Q13310 644 aaKnown RBP eCLIP16.68■□□□□ 0.26
RPAIN-211ENST00000572174 ARHGEF6Q15052 776 aa16.68■□□□□ 0.26
RPAIN-211ENST00000572174 ABCB5Q2M3G0 1257 aa16.68■□□□□ 0.26
RPAIN-211ENST00000572174 SLC4A8Q2Y0W8 1093 aa16.68■□□□□ 0.26
RPAIN-211ENST00000572174 SBK1Q52WX2 424 aa16.68■□□□□ 0.26
RPAIN-211ENST00000572174 C12orf60Q5U649 245 aa16.68■□□□□ 0.26
RPAIN-211ENST00000572174 PRRT2Q7Z6L0 340 aaPredicted RBP16.68■□□□□ 0.26
RPAIN-211ENST00000572174 PROCA1Q8NCQ7 364 aaPredicted RBP16.68■□□□□ 0.26
RPAIN-211ENST00000572174 PARK7Q99497 189 aaKnown RBP16.68■□□□□ 0.26
RPAIN-211ENST00000572174 WDR18Q9BV38 432 aa16.68■□□□□ 0.26
RPAIN-211ENST00000572174 TSKSQ9UJT2 592 aa16.68■□□□□ 0.26
RPAIN-211ENST00000572174 MYH4Q9Y623 1939 aa16.68■□□□□ 0.26
RPAIN-211ENST00000572174 LAMA4Q16363 1823 aa16.68■□□□□ 0.26
RPAIN-211ENST00000572174 ROBO3Q96MS0 1386 aa16.67■□□□□ 0.26
RPAIN-211ENST00000572174 TRIM75PA6NK02 468 aa16.67■□□□□ 0.26
RPAIN-211ENST00000572174 C19orf81C9J6K1 198 aa16.67■□□□□ 0.26
RPAIN-211ENST00000572174 PATL2C9JE40 543 aaKnown RBP16.67■□□□□ 0.26
RPAIN-211ENST00000572174 USP17L12C9JPN9 530 aa16.67■□□□□ 0.26
RPAIN-211ENST00000572174 USP17L21D6R901 530 aa16.67■□□□□ 0.26
RPAIN-211ENST00000572174 PRKAB2O43741 272 aa16.67■□□□□ 0.26
RPAIN-211ENST00000572174 PLCD1P51178 756 aa16.67■□□□□ 0.26
RPAIN-211ENST00000572174 GABPAQ06546 454 aa16.67■□□□□ 0.26
RPAIN-211ENST00000572174 SLFNL1Q499Z3 407 aa16.67■□□□□ 0.26
RPAIN-211ENST00000572174 ERICH6BQ5W0A0 696 aa16.67■□□□□ 0.26
RPAIN-211ENST00000572174 NAPBQ9H115 298 aa16.67■□□□□ 0.26
RPAIN-211ENST00000572174 DIAPH3Q9NSV4 1193 aa16.67■□□□□ 0.26
RPAIN-211ENST00000572174 PNMA3Q9UL41 463 aa16.67■□□□□ 0.26
RPAIN-211ENST00000572174 GSG1L2A8MUP6 293 aa16.66■□□□□ 0.26
RPAIN-211ENST00000572174 M0R2C6 588 aa16.66■□□□□ 0.26
RPAIN-211ENST00000572174 MGAMO43451 1857 aa16.66■□□□□ 0.26
RPAIN-211ENST00000572174 MCMDC2Q4G0Z9 681 aa16.66■□□□□ 0.26
RPAIN-211ENST00000572174 TTC22Q5TAA0 569 aa16.66■□□□□ 0.26
RPAIN-211ENST00000572174 C16orf86Q6ZW13 317 aa16.66■□□□□ 0.26
RPAIN-211ENST00000572174 CCDC136Q96JN2 1154 aa16.66■□□□□ 0.26
RPAIN-211ENST00000572174 TMOD4Q9NZQ9 345 aa16.66■□□□□ 0.26
RPAIN-211ENST00000572174 GREB1LQ9C091 1923 aaPredicted RBP16.66■□□□□ 0.26
RPAIN-211ENST00000572174 BTBD19C9JJ37 291 aa16.65■□□□□ 0.26
RPAIN-211ENST00000572174 GPR25O00155 361 aa16.65■□□□□ 0.26
RPAIN-211ENST00000572174 FKTNO75072 461 aa16.65■□□□□ 0.26
RPAIN-211ENST00000572174 GDF11O95390 407 aa16.65■□□□□ 0.26
RPAIN-211ENST00000572174 TBC1D8O95759 1140 aa16.65■□□□□ 0.26
RPAIN-211ENST00000572174 GH2P01242 217 aa16.65■□□□□ 0.26
RPAIN-211ENST00000572174 SHMT1P34896 483 aa16.65■□□□□ 0.26
RPAIN-211ENST00000572174 USP14P54578 494 aa16.65■□□□□ 0.26
RPAIN-211ENST00000572174 SPP2Q13103 211 aa16.65■□□□□ 0.26
RPAIN-211ENST00000572174 CRHR2Q13324 411 aa16.65■□□□□ 0.26
RPAIN-211ENST00000572174 CTR9Q6PD62 1173 aa16.65■□□□□ 0.26
RPAIN-211ENST00000572174 GADL1Q6ZQY3 521 aa16.65■□□□□ 0.26
RPAIN-211ENST00000572174 TMEM179Q6ZVK1 233 aa16.65■□□□□ 0.26
RPAIN-211ENST00000572174 FAM43AQ8N2R8 423 aa16.65■□□□□ 0.26
RPAIN-211ENST00000572174 PTPN18Q99952 460 aa16.65■□□□□ 0.26
RPAIN-211ENST00000572174 SH2D4AQ9H788 454 aa16.65■□□□□ 0.26
RPAIN-211ENST00000572174 AGTPBP1Q9UPW5 1226 aa16.65■□□□□ 0.26
RPAIN-211ENST00000572174 USP17L10C9JJH3 530 aa16.64■□□□□ 0.25
RPAIN-211ENST00000572174 PDHXO00330 501 aa16.64■□□□□ 0.25
RPAIN-211ENST00000572174 CHGBP05060 677 aa16.64■□□□□ 0.25
RPAIN-211ENST00000572174 PDE4BQ07343 736 aa16.64■□□□□ 0.25
RPAIN-211ENST00000572174 SH3D19Q5HYK7 790 aa16.64■□□□□ 0.25
RPAIN-211ENST00000572174 RUFY2Q8WXA3 655 aa16.64■□□□□ 0.25
RPAIN-211ENST00000572174 ERO1AQ96HE7 468 aa16.64■□□□□ 0.25
RPAIN-211ENST00000572174 FEZ1Q99689 392 aa16.64■□□□□ 0.25
RPAIN-211ENST00000572174 ZMYM6O95789 1325 aa16.64■□□□□ 0.25
RPAIN-211ENST00000572174 CCDC171Q6TFL3 1326 aa16.64■□□□□ 0.25
RPAIN-211ENST00000572174 MPHOSPH10O00566 681 aaKnown RBP16.63■□□□□ 0.25
RPAIN-211ENST00000572174 TLR2O60603 784 aa16.63■□□□□ 0.25
RPAIN-211ENST00000572174 SLURP2P0DP57 97 aa16.63■□□□□ 0.25
RPAIN-211ENST00000572174 SDSP20132 328 aa16.63■□□□□ 0.25
RPAIN-211ENST00000572174 CDK8P49336 464 aa16.63■□□□□ 0.25
RPAIN-211ENST00000572174 BACE1P56817 501 aa16.63■□□□□ 0.25
RPAIN-211ENST00000572174 KIF22Q14807 665 aa16.63■□□□□ 0.25
RPAIN-211ENST00000572174 RAB3GAP1Q15042 981 aa16.63■□□□□ 0.25
RPAIN-211ENST00000572174 PKN2Q16513 984 aaKnown RBP16.63■□□□□ 0.25
RPAIN-211ENST00000572174 PPP4R3BQ5MIZ7 849 aa16.63■□□□□ 0.25
RPAIN-211ENST00000572174 IFNL3Q8IZI9 196 aa16.63■□□□□ 0.25
RPAIN-211ENST00000572174 TNS4Q8IZW8 715 aa16.63■□□□□ 0.25
RPAIN-211ENST00000572174 RAD50Q92878 1312 aa16.63■□□□□ 0.25
RPAIN-211ENST00000572174 MINDY4BA8MYZ0 360 aa16.62■□□□□ 0.25
RPAIN-211ENST00000572174 OSBPP22059 807 aa16.62■□□□□ 0.25
RPAIN-211ENST00000572174 PDE4AP27815 886 aa16.62■□□□□ 0.25
RPAIN-211ENST00000572174 NMIQ13287 307 aaPredicted RBP16.62■□□□□ 0.25
RPAIN-211ENST00000572174 MTMR2Q13614 643 aa16.62■□□□□ 0.25
RPAIN-211ENST00000572174 RRP1BQ14684 758 aaKnown RBP16.62■□□□□ 0.25
RPAIN-211ENST00000572174 COL13A1Q5TAT6 717 aaPredicted RBP16.62■□□□□ 0.25
RPAIN-211ENST00000572174 USP17L2Q6R6M4 530 aa16.62■□□□□ 0.25
RPAIN-211ENST00000572174 CTU1Q7Z7A3 348 aaKnown RBP16.62■□□□□ 0.25
RPAIN-211ENST00000572174 SMCR8Q8TEV9 937 aaPredicted RBP16.62■□□□□ 0.25
RPAIN-211ENST00000572174 ZNF296Q8WUU4 475 aaPredicted RBP16.62■□□□□ 0.25
RPAIN-211ENST00000572174 SEC62Q99442 399 aaKnown RBP16.62■□□□□ 0.25
RPAIN-211ENST00000572174 MKNK2Q9HBH9 465 aa16.62■□□□□ 0.25
RPAIN-211ENST00000572174 ARHGEF10LQ9HCE6 1279 aa16.62■□□□□ 0.25
RPAIN-211ENST00000572174 A0A0D9SFI3 127 aa16.61■□□□□ 0.25
RPAIN-211ENST00000572174 CYP2D6P10635 497 aa16.61■□□□□ 0.25
RPAIN-211ENST00000572174 HMGCS2P54868 508 aa16.61■□□□□ 0.25
RPAIN-211ENST00000572174 SP3Q02447 781 aa16.61■□□□□ 0.25
RPAIN-211ENST00000572174 ALX1Q15699 326 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms