RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 HMGCS2P54868 508 aa17.55■□□□□ 0.4
LITAF-208ENST00000571627 TREML2Q5T2D2 321 aa17.55■□□□□ 0.4
LITAF-208ENST00000571627 ZSCAN25Q6NSZ9 544 aa17.55■□□□□ 0.4
LITAF-208ENST00000571627 FBXO46Q6PJ61 603 aaPredicted RBP17.55■□□□□ 0.4
LITAF-208ENST00000571627 TTC6Q86TZ1 520 aa17.55■□□□□ 0.4
LITAF-208ENST00000571627 KBTBD3Q8NAB2 608 aa17.55■□□□□ 0.4
LITAF-208ENST00000571627 PARK7Q99497 189 aaKnown RBP17.55■□□□□ 0.4
LITAF-208ENST00000571627 ARHGAP39Q9C0H5 1083 aa17.55■□□□□ 0.4
LITAF-208ENST00000571627 PUS7LQ9H0K6 701 aaKnown RBP17.55■□□□□ 0.4
LITAF-208ENST00000571627 ZBTB21Q9ULJ3 1066 aa17.55■□□□□ 0.4
LITAF-208ENST00000571627 MGAMO43451 1857 aa17.54■□□□□ 0.4
LITAF-208ENST00000571627 SALL3Q9BXA9 1300 aa17.54■□□□□ 0.4
LITAF-208ENST00000571627 GH2P01242 217 aa17.54■□□□□ 0.4
LITAF-208ENST00000571627 SHMT1P34896 483 aa17.54■□□□□ 0.4
LITAF-208ENST00000571627 C17orf99Q6UX52 265 aa17.54■□□□□ 0.4
LITAF-208ENST00000571627 EFCC1Q9HA90 598 aa17.54■□□□□ 0.4
LITAF-208ENST00000571627 IRX6P78412 446 aaPredicted RBP17.53■□□□□ 0.4
LITAF-208ENST00000571627 MTMR2Q13614 643 aa17.53■□□□□ 0.4
LITAF-208ENST00000571627 TATDN1Q6P1N9 297 aa17.53■□□□□ 0.4
LITAF-208ENST00000571627 TBC1D2Q9BYX2 928 aa17.53■□□□□ 0.4
LITAF-208ENST00000571627 AS3MTQ9HBK9 375 aa17.53■□□□□ 0.4
LITAF-208ENST00000571627 AGTPBP1Q9UPW5 1226 aa17.53■□□□□ 0.4
LITAF-208ENST00000571627 CENPFP49454 3210 aa17.53■□□□□ 0.4
LITAF-208ENST00000571627 CYP2D7A0A087X1C5 515 aa17.52■□□□□ 0.4
LITAF-208ENST00000571627 SMIM22K7EJ46 135 aa17.52■□□□□ 0.4
LITAF-208ENST00000571627 ERC2O15083 957 aa17.52■□□□□ 0.4
LITAF-208ENST00000571627 GLRX3O76003 335 aaKnown RBP17.52■□□□□ 0.4
LITAF-208ENST00000571627 IGHDP01880 384 aa17.52■□□□□ 0.4
LITAF-208ENST00000571627 LACTBP83111 547 aaPredicted RBP17.52■□□□□ 0.4
LITAF-208ENST00000571627 CERKLQ49MI3 558 aaPredicted RBP17.52■□□□□ 0.4
LITAF-208ENST00000571627 PROCA1Q8NCQ7 364 aaPredicted RBP17.52■□□□□ 0.4
LITAF-208ENST00000571627 SLC44A5Q8NCS7 719 aa17.52■□□□□ 0.4
LITAF-208ENST00000571627 OSBP2Q969R2 916 aa17.52■□□□□ 0.4
LITAF-208ENST00000571627 WDR18Q9BV38 432 aa17.52■□□□□ 0.4
LITAF-208ENST00000571627 PTPN22Q9Y2R2 807 aa17.52■□□□□ 0.4
LITAF-208ENST00000571627 SLC4A4Q9Y6R1 1079 aa17.52■□□□□ 0.4
LITAF-208ENST00000571627 RNF113AO15541 343 aaKnown RBP17.51■□□□□ 0.39
LITAF-208ENST00000571627 CTGFP29279 349 aa17.51■□□□□ 0.39
LITAF-208ENST00000571627 SOX10P56693 466 aa17.51■□□□□ 0.39
LITAF-208ENST00000571627 GABPAQ06546 454 aa17.51■□□□□ 0.39
LITAF-208ENST00000571627 B4GALNT3Q6L9W6 998 aa17.51■□□□□ 0.39
LITAF-208ENST00000571627 DYNLL2Q96FJ2 89 aa17.51■□□□□ 0.39
LITAF-208ENST00000571627 LNPKQ9C0E8 428 aa17.51■□□□□ 0.39
LITAF-208ENST00000571627 ATP8A2Q9NTI2 1148 aa17.51■□□□□ 0.39
LITAF-208ENST00000571627 SLC45A1Q9Y2W3 748 aa17.51■□□□□ 0.39
LITAF-208ENST00000571627 M0R2C6 588 aa17.5■□□□□ 0.39
LITAF-208ENST00000571627 BCRP11274 1271 aa17.5■□□□□ 0.39
LITAF-208ENST00000571627 BACE1P56817 501 aa17.5■□□□□ 0.39
LITAF-208ENST00000571627 KIF22Q14807 665 aa17.5■□□□□ 0.39
LITAF-208ENST00000571627 RAB3GAP1Q15042 981 aa17.5■□□□□ 0.39
LITAF-208ENST00000571627 ABCB5Q2M3G0 1257 aa17.5■□□□□ 0.39
LITAF-208ENST00000571627 SH3D19Q5HYK7 790 aa17.5■□□□□ 0.39
LITAF-208ENST00000571627 SMCR8Q8TEV9 937 aaPredicted RBP17.5■□□□□ 0.39
LITAF-208ENST00000571627 APPBP2Q92624 585 aa17.5■□□□□ 0.39
LITAF-208ENST00000571627 STRBPQ96SI9 672 aaKnown RBP17.5■□□□□ 0.39
LITAF-208ENST00000571627 FSD1Q9BTV5 496 aa17.5■□□□□ 0.39
LITAF-208ENST00000571627 GINM1Q9NU53 330 aa17.5■□□□□ 0.39
LITAF-208ENST00000571627 USP17L12C9JPN9 530 aa17.49■□□□□ 0.39
LITAF-208ENST00000571627 USP17L21D6R901 530 aa17.49■□□□□ 0.39
LITAF-208ENST00000571627 ZFYP08048 801 aaPredicted RBP17.49■□□□□ 0.39
LITAF-208ENST00000571627 SMC5Q8IY18 1101 aa17.49■□□□□ 0.39
LITAF-208ENST00000571627 SEC62Q99442 399 aaKnown RBP17.49■□□□□ 0.39
LITAF-208ENST00000571627 USP17L10C9JJH3 530 aa17.48■□□□□ 0.39
LITAF-208ENST00000571627 MPHOSPH10O00566 681 aaKnown RBP17.48■□□□□ 0.39
LITAF-208ENST00000571627 PSMC4P43686 418 aa17.48■□□□□ 0.39
LITAF-208ENST00000571627 PDE1AP54750 535 aa17.48■□□□□ 0.39
LITAF-208ENST00000571627 ZYXQ15942 572 aaKnown RBP17.48■□□□□ 0.39
LITAF-208ENST00000571627 C12orf60Q5U649 245 aa17.48■□□□□ 0.39
LITAF-208ENST00000571627 DDRGK1Q96HY6 314 aa17.48■□□□□ 0.39
LITAF-208ENST00000571627 TRIM47Q96LD4 638 aa17.48■□□□□ 0.39
LITAF-208ENST00000571627 FEZ1Q99689 392 aa17.48■□□□□ 0.39
LITAF-208ENST00000571627 ASCC2Q9H1I8 757 aaPredicted RBP17.48■□□□□ 0.39
LITAF-208ENST00000571627 TMOD4Q9NZQ9 345 aa17.48■□□□□ 0.39
LITAF-208ENST00000571627 STAP2Q9UGK3 403 aa17.48■□□□□ 0.39
LITAF-208ENST00000571627 PTCH2Q9Y6C5 1203 aa17.48■□□□□ 0.39
LITAF-208ENST00000571627 GSG1L2A8MUP6 293 aa17.47■□□□□ 0.39
LITAF-208ENST00000571627 GPAA1O43292 621 aa17.47■□□□□ 0.39
LITAF-208ENST00000571627 GUCY1A2P33402 732 aa17.47■□□□□ 0.39
LITAF-208ENST00000571627 SEPT2Q15019 361 aa17.47■□□□□ 0.39
LITAF-208ENST00000571627 ARHGEF6Q15052 776 aa17.47■□□□□ 0.39
LITAF-208ENST00000571627 CTR9Q6PD62 1173 aa17.47■□□□□ 0.39
LITAF-208ENST00000571627 ANKRD13CQ8N6S4 541 aa17.47■□□□□ 0.39
LITAF-208ENST00000571627 ACER1Q8TDN7 264 aa17.47■□□□□ 0.39
LITAF-208ENST00000571627 CABP5Q9NP86 173 aa17.47■□□□□ 0.39
LITAF-208ENST00000571627 PNMA3Q9UL41 463 aa17.47■□□□□ 0.39
LITAF-208ENST00000571627 C19orf81C9J6K1 198 aa17.46■□□□□ 0.39
LITAF-208ENST00000571627 FMNL1O95466 1100 aaPredicted RBP17.46■□□□□ 0.39
LITAF-208ENST00000571627 PABPC4Q13310 644 aaKnown RBP eCLIP17.46■□□□□ 0.39
LITAF-208ENST00000571627 AMOTL1Q8IY63 956 aa17.46■□□□□ 0.39
LITAF-208ENST00000571627 EPB41L4AQ9HCS5 686 aaPredicted RBP17.46■□□□□ 0.39
LITAF-208ENST00000571627 EMILIN3Q9NT22 766 aa17.46■□□□□ 0.39
LITAF-208ENST00000571627 SWAP70Q9UH65 585 aa17.46■□□□□ 0.39
LITAF-208ENST00000571627 DOCK3Q8IZD9 2030 aa17.46■□□□□ 0.39
LITAF-208ENST00000571627 AKR1B1P15121 316 aa17.45■□□□□ 0.38
LITAF-208ENST00000571627 OSBPP22059 807 aa17.45■□□□□ 0.38
LITAF-208ENST00000571627 CDK8P49336 464 aa17.45■□□□□ 0.38
LITAF-208ENST00000571627 LRRFIP1Q32MZ4 808 aaKnown RBP17.45■□□□□ 0.38
LITAF-208ENST00000571627 ZMYM1Q5SVZ6 1142 aa17.45■□□□□ 0.38
LITAF-208ENST00000571627 USP17L2Q6R6M4 530 aa17.45■□□□□ 0.38
LITAF-208ENST00000571627 CHD1LQ86WJ1 897 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms