RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 EXOC6BQ9Y2D4 811 aa10.53□□□□□ -0.72
CTDNEP1-203ENST00000570385 COL2A1P02458 1487 aaPredicted RBP10.53□□□□□ -0.72
CTDNEP1-203ENST00000570385 SIPA1L1O43166 1804 aa10.52□□□□□ -0.73
CTDNEP1-203ENST00000570385 APBB1O00213 710 aa10.52□□□□□ -0.73
CTDNEP1-203ENST00000570385 ASNSP08243 561 aa10.52□□□□□ -0.73
CTDNEP1-203ENST00000570385 CYP2B6P20813 491 aa10.52□□□□□ -0.73
CTDNEP1-203ENST00000570385 BACE1P56817 501 aa10.52□□□□□ -0.73
CTDNEP1-203ENST00000570385 PABPC4Q13310 644 aaKnown RBP eCLIP10.52□□□□□ -0.73
CTDNEP1-203ENST00000570385 SH3D19Q5HYK7 790 aa10.52□□□□□ -0.73
CTDNEP1-203ENST00000570385 AACSQ86V21 672 aa10.52□□□□□ -0.73
CTDNEP1-203ENST00000570385 FOXP4Q8IVH2 680 aaPredicted RBP10.52□□□□□ -0.73
CTDNEP1-203ENST00000570385 MAGEB6Q8N7X4 407 aa10.52□□□□□ -0.73
CTDNEP1-203ENST00000570385 DIS3LQ8TF46 1054 aaKnown RBP10.52□□□□□ -0.73
CTDNEP1-203ENST00000570385 WDR18Q9BV38 432 aa10.52□□□□□ -0.73
CTDNEP1-203ENST00000570385 TXNRD2Q9NNW7 524 aa10.52□□□□□ -0.73
CTDNEP1-203ENST00000570385 IL1RAPL2Q9NP60 686 aa10.52□□□□□ -0.73
CTDNEP1-203ENST00000570385 GJD2Q9UKL4 321 aa10.52□□□□□ -0.73
CTDNEP1-203ENST00000570385 ZBTB21Q9ULJ3 1066 aa10.52□□□□□ -0.73
CTDNEP1-203ENST00000570385 NOP58Q9Y2X3 529 aaKnown RBP10.52□□□□□ -0.73
CTDNEP1-203ENST00000570385 GH2P01242 217 aa10.51□□□□□ -0.73
CTDNEP1-203ENST00000570385 HLA-DOAP06340 250 aa10.51□□□□□ -0.73
CTDNEP1-203ENST00000570385 USP5P45974 858 aa10.51□□□□□ -0.73
CTDNEP1-203ENST00000570385 ZYXQ15942 572 aaKnown RBP10.51□□□□□ -0.73
CTDNEP1-203ENST00000570385 CEP85Q6P2H3 762 aa10.51□□□□□ -0.73
CTDNEP1-203ENST00000570385 PAWRQ96IZ0 340 aaKnown RBP10.51□□□□□ -0.73
CTDNEP1-203ENST00000570385 ZNF512BQ96KM6 892 aaPredicted RBP10.51□□□□□ -0.73
CTDNEP1-203ENST00000570385 PAGR1Q9BTK6 254 aa10.51□□□□□ -0.73
CTDNEP1-203ENST00000570385 TBC1D2Q9BYX2 928 aa10.51□□□□□ -0.73
CTDNEP1-203ENST00000570385 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.51□□□□□ -0.73
CTDNEP1-203ENST00000570385 PAK6Q9NQU5 681 aaPredicted RBP10.51□□□□□ -0.73
CTDNEP1-203ENST00000570385 EMILIN3Q9NT22 766 aa10.51□□□□□ -0.73
CTDNEP1-203ENST00000570385 NR2E3Q9Y5X4 410 aa10.51□□□□□ -0.73
CTDNEP1-203ENST00000570385 LOC285556D6RIA3 1793 aa10.51□□□□□ -0.73
CTDNEP1-203ENST00000570385 CDK5RAP2Q96SN8 1893 aa10.51□□□□□ -0.73
CTDNEP1-203ENST00000570385 USP17L10C9JJH3 530 aa10.5□□□□□ -0.73
CTDNEP1-203ENST00000570385 EVI5O60447 810 aa10.5□□□□□ -0.73
CTDNEP1-203ENST00000570385 HMGCRP04035 888 aa10.5□□□□□ -0.73
CTDNEP1-203ENST00000570385 HERVK_113P62684 666 aa10.5□□□□□ -0.73
CTDNEP1-203ENST00000570385 Q3C1V9 767 aa10.5□□□□□ -0.73
CTDNEP1-203ENST00000570385 TRIB2Q92519 343 aa10.5□□□□□ -0.73
CTDNEP1-203ENST00000570385 CRISPLD2Q9H0B8 497 aa10.5□□□□□ -0.73
CTDNEP1-203ENST00000570385 RBPJLQ9UBG7 517 aa10.5□□□□□ -0.73
CTDNEP1-203ENST00000570385 MAST2Q6P0Q8 1798 aa10.49□□□□□ -0.73
CTDNEP1-203ENST00000570385 C19orf81C9J6K1 198 aa10.49□□□□□ -0.73
CTDNEP1-203ENST00000570385 HOXA7P31268 230 aaPredicted RBP10.49□□□□□ -0.73
CTDNEP1-203ENST00000570385 EVX2Q03828 476 aa10.49□□□□□ -0.73
CTDNEP1-203ENST00000570385 RAB3GAP1Q15042 981 aa10.49□□□□□ -0.73
CTDNEP1-203ENST00000570385 POTEEQ6S8J3 1075 aa10.49□□□□□ -0.73
CTDNEP1-203ENST00000570385 METTL16Q86W50 562 aaKnown RBP10.49□□□□□ -0.73
CTDNEP1-203ENST00000570385 CCAR1Q8IX12 1150 aaKnown RBP10.49□□□□□ -0.73
CTDNEP1-203ENST00000570385 GPRC5AQ8NFJ5 357 aa10.49□□□□□ -0.73
CTDNEP1-203ENST00000570385 FEZ1Q99689 392 aa10.49□□□□□ -0.73
CTDNEP1-203ENST00000570385 PORCNQ9H237 461 aa10.49□□□□□ -0.73
CTDNEP1-203ENST00000570385 HMX1Q9NP08 348 aaPredicted RBP10.49□□□□□ -0.73
CTDNEP1-203ENST00000570385 MORF4L1Q9UBU8 362 aa10.49□□□□□ -0.73
CTDNEP1-203ENST00000570385 STAP2Q9UGK3 403 aa10.49□□□□□ -0.73
CTDNEP1-203ENST00000570385 MYH1P12882 1939 aa10.48□□□□□ -0.73
CTDNEP1-203ENST00000570385 RANBP2P49792 3224 aaKnown RBP10.48□□□□□ -0.73
CTDNEP1-203ENST00000570385 PLCD1P51178 756 aa10.48□□□□□ -0.73
CTDNEP1-203ENST00000570385 MAP3K12Q12852 859 aa10.48□□□□□ -0.73
CTDNEP1-203ENST00000570385 CCL14Q16627 93 aa10.48□□□□□ -0.73
CTDNEP1-203ENST00000570385 USP17L2Q6R6M4 530 aa10.48□□□□□ -0.73
CTDNEP1-203ENST00000570385 NECAB2Q7Z6G3 386 aa10.48□□□□□ -0.73
CTDNEP1-203ENST00000570385 ACER1Q8TDN7 264 aa10.48□□□□□ -0.73
CTDNEP1-203ENST00000570385 NUDT12Q9BQG2 462 aa10.48□□□□□ -0.73
CTDNEP1-203ENST00000570385 ZMYND8Q9ULU4 1186 aaPredicted RBP10.48□□□□□ -0.73
CTDNEP1-203ENST00000570385 RPTORQ8N122 1335 aa10.48□□□□□ -0.73
CTDNEP1-203ENST00000570385 FOCADQ5VW36 1801 aa10.47□□□□□ -0.73
CTDNEP1-203ENST00000570385 POLR3DP05423 398 aaPredicted RBP10.47□□□□□ -0.73
CTDNEP1-203ENST00000570385 PRKAR2AP13861 404 aaKnown RBP10.47□□□□□ -0.73
CTDNEP1-203ENST00000570385 ERVK-9P63128 1117 aa10.47□□□□□ -0.73
CTDNEP1-203ENST00000570385 ERVK-24P63145 666 aa10.47□□□□□ -0.73
CTDNEP1-203ENST00000570385 CERKLQ49MI3 558 aaPredicted RBP10.47□□□□□ -0.73
CTDNEP1-203ENST00000570385 WDR78Q5VTH9 848 aa10.47□□□□□ -0.73
CTDNEP1-203ENST00000570385 DIEXFQ68CQ4 756 aaKnown RBP10.47□□□□□ -0.73
CTDNEP1-203ENST00000570385 ERC1Q8IUD2 1116 aa10.47□□□□□ -0.73
CTDNEP1-203ENST00000570385 C7orf61Q8IZ16 206 aa10.47□□□□□ -0.73
CTDNEP1-203ENST00000570385 RHPN1Q8TCX5 695 aa10.47□□□□□ -0.73
CTDNEP1-203ENST00000570385 EDC3Q96F86 508 aaKnown RBP10.47□□□□□ -0.73
CTDNEP1-203ENST00000570385 DNAJC2Q99543 621 aaKnown RBP10.47□□□□□ -0.73
CTDNEP1-203ENST00000570385 CWC22Q9HCG8 908 aaKnown RBP10.47□□□□□ -0.73
CTDNEP1-203ENST00000570385 GINM1Q9NU53 330 aa10.47□□□□□ -0.73
CTDNEP1-203ENST00000570385 SERPINB13Q9UIV8 391 aa10.47□□□□□ -0.73
CTDNEP1-203ENST00000570385 PLXNB2O15031 1838 aa10.47□□□□□ -0.73
CTDNEP1-203ENST00000570385 MAGEB6P1A0A0J9YX57 407 aa10.46□□□□□ -0.73
CTDNEP1-203ENST00000570385 GOLIM4O00461 696 aa10.46□□□□□ -0.73
CTDNEP1-203ENST00000570385 MPHOSPH10O00566 681 aaKnown RBP10.46□□□□□ -0.73
CTDNEP1-203ENST00000570385 SYN1P17600 705 aa10.46□□□□□ -0.73
CTDNEP1-203ENST00000570385 CCND3P30281 292 aaPredicted RBP10.46□□□□□ -0.73
CTDNEP1-203ENST00000570385 MAPK4P31152 587 aa10.46□□□□□ -0.73
CTDNEP1-203ENST00000570385 SHMT1P34896 483 aa10.46□□□□□ -0.73
CTDNEP1-203ENST00000570385 MNX1P50219 401 aaPredicted RBP10.46□□□□□ -0.73
CTDNEP1-203ENST00000570385 PDE3AQ14432 1141 aa10.46□□□□□ -0.73
CTDNEP1-203ENST00000570385 ABCB5Q2M3G0 1257 aa10.46□□□□□ -0.73
CTDNEP1-203ENST00000570385 SLFNL1Q499Z3 407 aa10.46□□□□□ -0.73
CTDNEP1-203ENST00000570385 SLC9C2Q5TAH2 1124 aa10.46□□□□□ -0.73
CTDNEP1-203ENST00000570385 TATDN1Q6P1N9 297 aa10.46□□□□□ -0.73
CTDNEP1-203ENST00000570385 GPR142Q7Z601 462 aa10.46□□□□□ -0.73
CTDNEP1-203ENST00000570385 TTC6Q86TZ1 520 aa10.46□□□□□ -0.73
CTDNEP1-203ENST00000570385 RIOK1Q9BRS2 568 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms