RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 BRINP3Q76B58 766 aa9.31□□□□□ -0.92
TCF4-246ENST00000570287 C8orf48Q96LL4 319 aa9.31□□□□□ -0.92
TCF4-246ENST00000570287 WDR17Q8IZU2 1322 aa9.31□□□□□ -0.92
TCF4-246ENST00000570287 AFDNP55196 1824 aaKnown RBP9.31□□□□□ -0.92
TCF4-246ENST00000570287 NDUFB5O43674 189 aa9.31□□□□□ -0.92
TCF4-246ENST00000570287 ADCY5O95622 1261 aa9.31□□□□□ -0.92
TCF4-246ENST00000570287 CAPN2P17655 700 aa9.31□□□□□ -0.92
TCF4-246ENST00000570287 KCNJ4P48050 445 aa9.31□□□□□ -0.92
TCF4-246ENST00000570287 CHAF1AQ13111 956 aaPredicted RBP9.31□□□□□ -0.92
TCF4-246ENST00000570287 C21orf62-AS1Q17RA5 79 aa9.31□□□□□ -0.92
TCF4-246ENST00000570287 ARFGEF2Q9Y6D5 1785 aa9.31□□□□□ -0.92
TCF4-246ENST00000570287 PCDH11XQ9BZA7 1347 aa9.31□□□□□ -0.92
TCF4-246ENST00000570287 PCDH11YQ9BZA8 1340 aa9.31□□□□□ -0.92
TCF4-246ENST00000570287 DNAJB2P25686 324 aa9.3□□□□□ -0.92
TCF4-246ENST00000570287 EPHA10Q5JZY3 1008 aa9.3□□□□□ -0.92
TCF4-246ENST00000570287 SOGA3Q5TF21 947 aa9.3□□□□□ -0.92
TCF4-246ENST00000570287 RINLQ6ZS11 566 aa9.3□□□□□ -0.92
TCF4-246ENST00000570287 PLBD2Q8NHP8 589 aa9.3□□□□□ -0.92
TCF4-246ENST00000570287 KIF18AQ8NI77 898 aa9.3□□□□□ -0.92
TCF4-246ENST00000570287 CRELD1Q96HD1 420 aa9.3□□□□□ -0.92
TCF4-246ENST00000570287 TM6SF1Q9BZW5 370 aa9.3□□□□□ -0.92
TCF4-246ENST00000570287 TSPYL1Q9H0U9 437 aa9.3□□□□□ -0.92
TCF4-246ENST00000570287 PCDHB9Q9Y5E1 797 aa9.3□□□□□ -0.92
TCF4-246ENST00000570287 COMMD10Q9Y6G5 202 aa9.3□□□□□ -0.92
TCF4-246ENST00000570287 RABL6Q3YEC7 729 aaPredicted RBP9.3□□□□□ -0.92
TCF4-246ENST00000570287 BRDTQ58F21 947 aaPredicted RBP9.3□□□□□ -0.92
TCF4-246ENST00000570287 CCDC85AQ96PX6 553 aaPredicted RBP9.3□□□□□ -0.92
TCF4-246ENST00000570287 DEPDC7Q96QD5 511 aa9.3□□□□□ -0.92
TCF4-246ENST00000570287 CCDC8Q9H0W5 538 aaPredicted RBP9.3□□□□□ -0.92
TCF4-246ENST00000570287 LIMCH1Q9UPQ0 1083 aa9.3□□□□□ -0.92
TCF4-246ENST00000570287 WDR33Q9C0J8 1336 aaKnown RBP9.3□□□□□ -0.92
TCF4-246ENST00000570287 ERVV-2B6SEH9 535 aa9.3□□□□□ -0.92
TCF4-246ENST00000570287 WEE1P30291 646 aa9.3□□□□□ -0.92
TCF4-246ENST00000570287 SIL1Q9H173 461 aa9.3□□□□□ -0.92
TCF4-246ENST00000570287 USP25Q9UHP3 1055 aa9.3□□□□□ -0.92
TCF4-246ENST00000570287 FKBPLQ9UIM3 349 aa9.3□□□□□ -0.92
TCF4-246ENST00000570287 INTUQ9ULD6 942 aa9.3□□□□□ -0.92
TCF4-246ENST00000570287 SOS2Q07890 1332 aaPredicted RBP9.29□□□□□ -0.92
TCF4-246ENST00000570287 CCDC171Q6TFL3 1326 aa9.29□□□□□ -0.92
TCF4-246ENST00000570287 EIF1AXP47813 144 aaKnown RBP9.29□□□□□ -0.92
TCF4-246ENST00000570287 RFX5P48382 616 aaPredicted RBP9.29□□□□□ -0.92
TCF4-246ENST00000570287 MASP1P48740 699 aa9.29□□□□□ -0.92
TCF4-246ENST00000570287 AK2P54819 239 aa9.29□□□□□ -0.92
TCF4-246ENST00000570287 PTH1RQ03431 593 aa9.29□□□□□ -0.92
TCF4-246ENST00000570287 ANKS3Q6ZW76 656 aa9.29□□□□□ -0.92
TCF4-246ENST00000570287 C14orf80Q86SX3 495 aa9.29□□□□□ -0.92
TCF4-246ENST00000570287 CERKQ8TCT0 537 aa9.29□□□□□ -0.92
TCF4-246ENST00000570287 EMID1Q96A84 441 aaPredicted RBP9.29□□□□□ -0.92
TCF4-246ENST00000570287 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.29□□□□□ -0.92
TCF4-246ENST00000570287 NECTIN1Q15223 517 aa9.29□□□□□ -0.92
TCF4-246ENST00000570287 NBPF10Q6P3W6 841 aaKnown RBP9.29□□□□□ -0.92
TCF4-246ENST00000570287 PRDM11Q9NQV5 511 aa9.29□□□□□ -0.92
TCF4-246ENST00000570287 CALCOCO1Q9P1Z2 691 aa9.29□□□□□ -0.92
TCF4-246ENST00000570287 UBR2Q8IWV8 1755 aa9.29□□□□□ -0.92
TCF4-246ENST00000570287 ZBTB39O15060 712 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 CASTP20810 708 aaKnown RBP9.28□□□□□ -0.92
TCF4-246ENST00000570287 HSPA2P54652 639 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 PTPN12Q05209 780 aaKnown RBP9.28□□□□□ -0.92
TCF4-246ENST00000570287 VPS53Q5VIR6 699 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 FUCA2Q9BTY2 467 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 ZSWIM6Q9HCJ5 1215 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 HOMER2Q9NSB8 354 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 TLR7Q9NYK1 1049 aaKnown RBP9.28□□□□□ -0.92
TCF4-246ENST00000570287 CNTN3Q9P232 1028 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 PYCARDQ9ULZ3 195 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.28□□□□□ -0.92
TCF4-246ENST00000570287 COL5A2P05997 1499 aaPredicted RBP9.28□□□□□ -0.92
TCF4-246ENST00000570287 SMTNL1A8MU46 457 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 ZKSCAN1P17029 563 aaPredicted RBP9.28□□□□□ -0.92
TCF4-246ENST00000570287 CASP7P55210 303 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 NMIQ13287 307 aaPredicted RBP9.28□□□□□ -0.92
TCF4-246ENST00000570287 PRPF40BQ6NWY9 871 aaKnown RBP9.28□□□□□ -0.92
TCF4-246ENST00000570287 PI16Q6UXB8 463 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 TOM1L2Q6ZVM7 507 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 RUFY3Q7L099 469 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 KLHDC4Q8TBB5 520 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 MAP4K1Q92918 833 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 CHAMP1Q96JM3 812 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 ZSCAN31Q96LW9 406 aaPredicted RBP9.28□□□□□ -0.92
TCF4-246ENST00000570287 DNAJC7Q99615 494 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 A0A087WZG4 1122 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 ZBTB24O43167 697 aaPredicted RBP9.28□□□□□ -0.92
TCF4-246ENST00000570287 STAU1O95793 577 aaKnown RBP9.28□□□□□ -0.92
TCF4-246ENST00000570287 ATP5JP18859 108 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 PIP4K2AP48426 406 aaPredicted RBP9.28□□□□□ -0.92
TCF4-246ENST00000570287 UBE3BQ7Z3V4 1068 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 MPNDQ8N594 471 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 ZNF454Q8N9F8 522 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 FSD1Q9BTV5 496 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 BOLA2Q9H3K6 86 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 LEMD3Q9Y2U8 911 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 CYP46A1Q9Y6A2 500 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 PAPPAQ13219 1627 aa9.28□□□□□ -0.92
TCF4-246ENST00000570287 GNA15P30679 374 aa9.27□□□□□ -0.93
TCF4-246ENST00000570287 TNNI3KQ59H18 835 aa9.27□□□□□ -0.93
TCF4-246ENST00000570287 KRT222Q8N1A0 295 aa9.27□□□□□ -0.93
TCF4-246ENST00000570287 GPRASP2Q96D09 838 aa9.27□□□□□ -0.93
TCF4-246ENST00000570287 FAM227BQ96M60 508 aa9.27□□□□□ -0.93
TCF4-246ENST00000570287 PDRG1Q9NUG6 133 aa9.27□□□□□ -0.93
TCF4-246ENST00000570287 FPGT-TNNI3KV9GXZ4 949 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms