RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 FBXO27Q8NI29 283 aa4.23□□□□□ -1.73
CNOT1-221ENST00000569924 ZNF526Q8TF50 670 aaPredicted RBP4.23□□□□□ -1.73
CNOT1-221ENST00000569924 ZNF669Q96BR6 464 aaPredicted RBP4.23□□□□□ -1.73
CNOT1-221ENST00000569924 CCDC136Q96JN2 1154 aa4.23□□□□□ -1.73
CNOT1-221ENST00000569924 PRAM1Q96QH2 718 aa4.23□□□□□ -1.73
CNOT1-221ENST00000569924 INSM2Q96T92 566 aaPredicted RBP4.23□□□□□ -1.73
CNOT1-221ENST00000569924 TNKS2Q9H2K2 1166 aa4.23□□□□□ -1.73
CNOT1-221ENST00000569924 KANSL3Q9P2N6 904 aa4.23□□□□□ -1.73
CNOT1-221ENST00000569924 ZNRF3Q9ULT6 936 aa4.23□□□□□ -1.73
CNOT1-221ENST00000569924 PLAAQ9Y263 795 aa4.23□□□□□ -1.73
CNOT1-221ENST00000569924 NRAPQ86VF7 1730 aa4.23□□□□□ -1.73
CNOT1-221ENST00000569924 ADGRB1O14514 1584 aa4.23□□□□□ -1.73
CNOT1-221ENST00000569924 SPATA31A5Q5VU36 1347 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 SPATA31A7Q8IWB4 1347 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 KDM2BQ8NHM5 1336 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 TULP4Q9NRJ4 1543 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 RGPD1P0DJD0 1748 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 CRYBG1Q9Y4K1 1723 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 A0A1W2PNR3 127 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 FAM221AA4D161 298 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 EIF3JO75822 258 aaKnown RBP4.22□□□□□ -1.73
CNOT1-221ENST00000569924 SASH3O75995 380 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 GJB6O95452 261 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 ASMTLO95671 621 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 TIMP2P16035 220 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 ITPKAP23677 461 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 EXOSC10Q01780 885 aaKnown RBP4.22□□□□□ -1.73
CNOT1-221ENST00000569924 POU4F2Q12837 409 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 SEPT6Q14141 434 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 RPS26P11Q5JNZ5 115 aaPredicted RBP4.22□□□□□ -1.73
CNOT1-221ENST00000569924 LARP1BQ659C4 914 aaKnown RBP4.22□□□□□ -1.73
CNOT1-221ENST00000569924 BNC2Q6ZN30 1099 aaPredicted RBP4.22□□□□□ -1.73
CNOT1-221ENST00000569924 CCDC146Q8IYE0 955 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 MEIOBQ8N635 442 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 ST13P5Q8NFI4 369 aaPredicted RBP4.22□□□□□ -1.73
CNOT1-221ENST00000569924 PMM1Q92871 262 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 PLD4Q96BZ4 506 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 SGSM3Q96HU1 749 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 C8orf48Q96LL4 319 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 OSMRQ99650 979 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 TSEN34Q9BSV6 310 aaKnown RBP4.22□□□□□ -1.73
CNOT1-221ENST00000569924 PCGF6Q9BYE7 350 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 SEC31BQ9NQW1 1179 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 BTG4Q9NY30 223 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 POGKQ9P215 609 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 TCEAL9Q9UHQ7 104 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 ZMYM5Q9UJ78 669 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 PRR12Q9ULL5 1215 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 ATP8A1Q9Y2Q0 1164 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 THRAP3Q9Y2W1 955 aaKnown RBP4.22□□□□□ -1.73
CNOT1-221ENST00000569924 PTCH2Q9Y6C5 1203 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 GJA3Q9Y6H8 435 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 GPRASP1Q5JY77 1395 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 THSD7AQ9UPZ6 1657 aa4.22□□□□□ -1.73
CNOT1-221ENST00000569924 A0A1B0GTH6 734 aa4.21□□□□□ -1.74
CNOT1-221ENST00000569924 SPINT1O43278 529 aa4.21□□□□□ -1.74
CNOT1-221ENST00000569924 KCNQ2O43526 872 aa4.21□□□□□ -1.74
CNOT1-221ENST00000569924 PRC1O43663 620 aa4.21□□□□□ -1.74
CNOT1-221ENST00000569924 DIAPH1O60610 1272 aaKnown RBP4.21□□□□□ -1.74
CNOT1-221ENST00000569924 MMP20O60882 483 aa4.21□□□□□ -1.74
CNOT1-221ENST00000569924 CILPO75339 1184 aa4.21□□□□□ -1.74
CNOT1-221ENST00000569924 DDAH1O94760 285 aa4.21□□□□□ -1.74
CNOT1-221ENST00000569924 KIF4AO95239 1232 aa4.21□□□□□ -1.74
CNOT1-221ENST00000569924 TARSP26639 723 aaKnown RBP4.21□□□□□ -1.74
CNOT1-221ENST00000569924 MSX1P28360 303 aa4.21□□□□□ -1.74
CNOT1-221ENST00000569924 GRIA4P48058 902 aa4.21□□□□□ -1.74
CNOT1-221ENST00000569924 KCNQ4P56696 695 aa4.21□□□□□ -1.74
CNOT1-221ENST00000569924 SSRP1Q08945 709 aaKnown RBP4.21□□□□□ -1.74
CNOT1-221ENST00000569924 SAFB2Q14151 953 aaKnown RBP eCLIP4.21□□□□□ -1.74
CNOT1-221ENST00000569924 DIEXFQ68CQ4 756 aaKnown RBP4.21□□□□□ -1.74
CNOT1-221ENST00000569924 KANK3Q6NY19 840 aa4.21□□□□□ -1.74
CNOT1-221ENST00000569924 JAMLQ86YT9 394 aa4.21□□□□□ -1.74
CNOT1-221ENST00000569924 C19orf47Q8N9M1 422 aaKnown RBP4.21□□□□□ -1.74
CNOT1-221ENST00000569924 SNIP1Q8TAD8 396 aaKnown RBP4.21□□□□□ -1.74
CNOT1-221ENST00000569924 CNTNAP3BQ96NU0 1288 aa4.21□□□□□ -1.74
CNOT1-221ENST00000569924 ZKSCAN3Q9BRR0 538 aa4.21□□□□□ -1.74
CNOT1-221ENST00000569924 KRTAP3-3Q9BYR6 98 aa4.21□□□□□ -1.74
CNOT1-221ENST00000569924 KRTAP3-2Q9BYR7 98 aa4.21□□□□□ -1.74
CNOT1-221ENST00000569924 CNTNAP3Q9BZ76 1288 aa4.21□□□□□ -1.74
CNOT1-221ENST00000569924 ZCCHC2Q9C0B9 1178 aaKnown RBP4.21□□□□□ -1.74
CNOT1-221ENST00000569924 RBSNQ9H1K0 784 aa4.21□□□□□ -1.74
CNOT1-221ENST00000569924 MIR1-1HGQ9H1L0 117 aa4.21□□□□□ -1.74
CNOT1-221ENST00000569924 BRMS1Q9HCU9 246 aa4.21□□□□□ -1.74
CNOT1-221ENST00000569924 BRD7Q9NPI1 651 aa4.21□□□□□ -1.74
CNOT1-221ENST00000569924 CD2APQ9Y5K6 639 aa4.21□□□□□ -1.74
CNOT1-221ENST00000569924 TNS1Q9HBL0 1735 aaKnown RBP4.21□□□□□ -1.74
CNOT1-221ENST00000569924 PRR36Q9H6K5 1346 aa4.21□□□□□ -1.74
CNOT1-221ENST00000569924 PARD3Q8TEW0 1356 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 A0A0G2JS52 829 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 PAGE1O75459 146 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 POU3F3P20264 500 aaPredicted RBP4.2□□□□□ -1.74
CNOT1-221ENST00000569924 LMNB1P20700 586 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 CNGA1P29973 690 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 SLC19A1P41440 591 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 CTSOP43234 321 aaPredicted RBP4.2□□□□□ -1.74
CNOT1-221ENST00000569924 EVA1CP58658 441 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 CLCQ05315 142 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 CCINQ13939 588 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 PPP2R5EQ16537 467 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 SPRED3Q2MJR0 410 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms