RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 FGD1P98174 961 aa9.03□□□□□ -0.96
CHD9-220ENST00000569794 PTPN11Q06124 597 aaPredicted RBP9.03□□□□□ -0.96
CHD9-220ENST00000569794 ANKLE2Q86XL3 938 aa9.03□□□□□ -0.96
CHD9-220ENST00000569794 ZSCAN18Q8TBC5 510 aaPredicted RBP9.03□□□□□ -0.96
CHD9-220ENST00000569794 PLPPR2Q96GM1 343 aa9.03□□□□□ -0.96
CHD9-220ENST00000569794 MIPEPQ99797 713 aa9.03□□□□□ -0.96
CHD9-220ENST00000569794 GIPC1O14908 333 aa9.02□□□□□ -0.97
CHD9-220ENST00000569794 NKG7Q16617 165 aa9.02□□□□□ -0.97
CHD9-220ENST00000569794 HDXQ7Z353 690 aa9.02□□□□□ -0.97
CHD9-220ENST00000569794 MFSD2AQ8NA29 543 aa9.02□□□□□ -0.97
CHD9-220ENST00000569794 SETDB2Q96T68 719 aa9.02□□□□□ -0.97
CHD9-220ENST00000569794 WNT10AQ9GZT5 417 aa9.02□□□□□ -0.97
CHD9-220ENST00000569794 C1QTNF9P0C862 333 aa9.01□□□□□ -0.97
CHD9-220ENST00000569794 MAPK8P45983 427 aa9.01□□□□□ -0.97
CHD9-220ENST00000569794 THAP5Q7Z6K1 395 aa9.01□□□□□ -0.97
CHD9-220ENST00000569794 RIN3Q8TB24 985 aa9.01□□□□□ -0.97
CHD9-220ENST00000569794 FMR1Q06787 632 aaKnown RBP eCLIP9□□□□□ -0.97
CHD9-220ENST00000569794 LETMD1Q6P1Q0 360 aa9□□□□□ -0.97
CHD9-220ENST00000569794 C14orf37Q86TY3 774 aa9□□□□□ -0.97
CHD9-220ENST00000569794 SIAH1Q8IUQ4 282 aa9□□□□□ -0.97
CHD9-220ENST00000569794 FBXO15Q8NCQ5 510 aaPredicted RBP9□□□□□ -0.97
CHD9-220ENST00000569794 GAL3ST3Q96A11 431 aa9□□□□□ -0.97
CHD9-220ENST00000569794 CCDC120Q96HB5 630 aa9□□□□□ -0.97
CHD9-220ENST00000569794 ALPK1Q96QP1 1244 aa9□□□□□ -0.97
CHD9-220ENST00000569794 DIRC2Q96SL1 478 aa9□□□□□ -0.97
CHD9-220ENST00000569794 ALG1LQ6GMV1 187 aa8.99□□□□□ -0.97
CHD9-220ENST00000569794 ZNF746Q6NUN9 644 aaPredicted RBP8.99□□□□□ -0.97
CHD9-220ENST00000569794 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.99□□□□□ -0.97
CHD9-220ENST00000569794 NSUN3Q9H649 340 aaKnown RBP8.99□□□□□ -0.97
CHD9-220ENST00000569794 ZSCAN22P10073 491 aaPredicted RBP8.98□□□□□ -0.97
CHD9-220ENST00000569794 ETF1P62495 437 aaKnown RBP8.98□□□□□ -0.97
CHD9-220ENST00000569794 HID1Q8IV36 788 aa8.98□□□□□ -0.97
CHD9-220ENST00000569794 WWC3Q9ULE0 1092 aa8.98□□□□□ -0.97
CHD9-220ENST00000569794 SNCAIPQ9Y6H5 919 aa8.98□□□□□ -0.97
CHD9-220ENST00000569794 NFIBO00712 420 aa8.97□□□□□ -0.97
CHD9-220ENST00000569794 CBX7O95931 251 aa8.97□□□□□ -0.97
CHD9-220ENST00000569794 WIPI1Q5MNZ9 446 aaPredicted RBP8.97□□□□□ -0.97
CHD9-220ENST00000569794 PRAMEF13Q5VWM6 474 aa8.97□□□□□ -0.97
CHD9-220ENST00000569794 UBE2FQ969M7 185 aa8.97□□□□□ -0.97
CHD9-220ENST00000569794 KRTAP4-11Q9BYQ6 195 aa8.97□□□□□ -0.97
CHD9-220ENST00000569794 C12orf49Q9H741 205 aa8.97□□□□□ -0.97
CHD9-220ENST00000569794 SLAMF8Q9P0V8 285 aa8.97□□□□□ -0.97
CHD9-220ENST00000569794 RBAK-RBAKDNI3L0D1 243 aa8.96□□□□□ -0.98
CHD9-220ENST00000569794 CST3P01034 146 aaPredicted RBP8.96□□□□□ -0.98
CHD9-220ENST00000569794 USP17L7P0C7H9 530 aa8.96□□□□□ -0.98
CHD9-220ENST00000569794 CDK8P49336 464 aa8.96□□□□□ -0.98
CHD9-220ENST00000569794 ARID3AQ99856 593 aa8.96□□□□□ -0.98
CHD9-220ENST00000569794 FAM8A1Q9UBU6 413 aa8.96□□□□□ -0.98
CHD9-220ENST00000569794 SPG7Q9UQ90 795 aa8.96□□□□□ -0.98
CHD9-220ENST00000569794 SV2BQ7L1I2 683 aa8.95□□□□□ -0.98
CHD9-220ENST00000569794 TTC6Q86TZ1 520 aa8.95□□□□□ -0.98
CHD9-220ENST00000569794 ABHD4Q8TB40 342 aa8.95□□□□□ -0.98
CHD9-220ENST00000569794 COX4I2Q96KJ9 171 aa8.95□□□□□ -0.98
CHD9-220ENST00000569794 ZSWIM5Q9P217 1185 aa8.95□□□□□ -0.98
CHD9-220ENST00000569794 KIR3DL1P43629 444 aa8.94□□□□□ -0.98
CHD9-220ENST00000569794 TNK2Q07912 1038 aa8.94□□□□□ -0.98
CHD9-220ENST00000569794 LILRA6Q6PI73 481 aa8.94□□□□□ -0.98
CHD9-220ENST00000569794 ZSCAN29Q8IWY8 852 aaPredicted RBP8.94□□□□□ -0.98
CHD9-220ENST00000569794 XAGE3Q8WTP9 111 aa8.94□□□□□ -0.98
CHD9-220ENST00000569794 KCNK12Q9HB15 430 aa8.94□□□□□ -0.98
CHD9-220ENST00000569794 CD320Q9NPF0 282 aa8.94□□□□□ -0.98
CHD9-220ENST00000569794 DNAJC25-GNG10A0A024R161 153 aa8.93□□□□□ -0.98
CHD9-220ENST00000569794 TMEM253P0C7T8 217 aa8.93□□□□□ -0.98
CHD9-220ENST00000569794 RAC2P15153 192 aa8.93□□□□□ -0.98
CHD9-220ENST00000569794 CYP7A1P22680 504 aa8.93□□□□□ -0.98
CHD9-220ENST00000569794 GRK4P32298 578 aa8.93□□□□□ -0.98
CHD9-220ENST00000569794 TTBK2Q6IQ55 1244 aa8.93□□□□□ -0.98
CHD9-220ENST00000569794 EPB41L4BQ9H329 900 aa8.93□□□□□ -0.98
CHD9-220ENST00000569794 DCP1AQ9NPI6 582 aaPredicted RBP8.93□□□□□ -0.98
CHD9-220ENST00000569794 NPIPB6E9PJ23 425 aa8.92□□□□□ -0.98
CHD9-220ENST00000569794 BRD1O95696 1058 aa8.92□□□□□ -0.98
CHD9-220ENST00000569794 ESR1P03372 595 aa8.92□□□□□ -0.98
CHD9-220ENST00000569794 ATP2B2Q01814 1243 aa8.92□□□□□ -0.98
CHD9-220ENST00000569794 RALGPS1Q5JS13 557 aa8.92□□□□□ -0.98
CHD9-220ENST00000569794 TMPRSS7Q7RTY8 843 aa8.92□□□□□ -0.98
CHD9-220ENST00000569794 AMIGO3Q86WK7 504 aa8.92□□□□□ -0.98
CHD9-220ENST00000569794 ASB16Q96NS5 453 aa8.92□□□□□ -0.98
CHD9-220ENST00000569794 GFRA2O00451 464 aa8.91□□□□□ -0.98
CHD9-220ENST00000569794 MED14OSP0DP75 135 aa8.91□□□□□ -0.98
CHD9-220ENST00000569794 TTLL10Q6ZVT0 673 aa8.91□□□□□ -0.98
CHD9-220ENST00000569794 CDH24Q86UP0 819 aa8.91□□□□□ -0.98
CHD9-220ENST00000569794 TMEM59LQ9UK28 342 aa8.91□□□□□ -0.98
CHD9-220ENST00000569794 TTF2Q9UNY4 1162 aaKnown RBP8.91□□□□□ -0.98
CHD9-220ENST00000569794 TACC3Q9Y6A5 838 aa8.91□□□□□ -0.98
CHD9-220ENST00000569794 ERVFC1P60507 584 aa8.9□□□□□ -0.98
CHD9-220ENST00000569794 KCNA10Q16322 511 aa8.9□□□□□ -0.98
CHD9-220ENST00000569794 ATG14Q6ZNE5 492 aa8.9□□□□□ -0.98
CHD9-220ENST00000569794 PIWIL2Q8TC59 973 aaKnown RBP8.9□□□□□ -0.98
CHD9-220ENST00000569794 MYLIPQ8WY64 445 aa8.9□□□□□ -0.98
CHD9-220ENST00000569794 RAPGEFL1Q9UHV5 662 aa8.9□□□□□ -0.98
CHD9-220ENST00000569794 HPXP02790 462 aa8.89□□□□□ -0.99
CHD9-220ENST00000569794 GLDCP23378 1020 aa8.89□□□□□ -0.99
CHD9-220ENST00000569794 RPS26P62854 115 aaKnown RBP8.89□□□□□ -0.99
CHD9-220ENST00000569794 MRPL41Q8IXM3 137 aaKnown RBP8.89□□□□□ -0.99
CHD9-220ENST00000569794 DPH2Q9BQC3 489 aaPredicted RBP8.89□□□□□ -0.99
CHD9-220ENST00000569794 TJP2Q9UDY2 1190 aa8.89□□□□□ -0.99
CHD9-220ENST00000569794 ETV2O00321 342 aaPredicted RBP8.88□□□□□ -0.99
CHD9-220ENST00000569794 HK2P52789 917 aa8.88□□□□□ -0.99
CHD9-220ENST00000569794 SEPT6Q14141 434 aa8.88□□□□□ -0.99
CHD9-220ENST00000569794 ADAMTS10Q9H324 1103 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms