RNA–Protein interactions for RNA: ENST00000569784.1

SCAPER-223, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 580 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-223	ENST00000569784	ZNF333	Q96JL9	665 aa		10.44	□□□□□ -0.74
SCAPER-223	ENST00000569784	C1orf115	Q9H7X2	142 aa		10.44	□□□□□ -0.74
SCAPER-223	ENST00000569784	AATF	Q9NY61	560 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
SCAPER-223	ENST00000569784	TNN	Q9UQP3	1299 aa		10.44	□□□□□ -0.74
SCAPER-223	ENST00000569784	ZSWIM8	A7E2V4	1837 aa		10.44	□□□□□ -0.74
SCAPER-223	ENST00000569784	TNPO2	O14787	897 aa	Known RBP	10.43	□□□□□ -0.74
SCAPER-223	ENST00000569784	HLA-DOA	P06340	250 aa		10.43	□□□□□ -0.74
SCAPER-223	ENST00000569784	ARID4A	P29374	1257 aa	Predicted RBP	10.43	□□□□□ -0.74
SCAPER-223	ENST00000569784	MCAM	P43121	646 aa		10.43	□□□□□ -0.74
SCAPER-223	ENST00000569784	USP5	P45974	858 aa		10.43	□□□□□ -0.74
SCAPER-223	ENST00000569784	ATP8B2	P98198	1209 aa		10.43	□□□□□ -0.74
SCAPER-223	ENST00000569784	TNNI3K	Q59H18	835 aa		10.43	□□□□□ -0.74
SCAPER-223	ENST00000569784	C17orf99	Q6UX52	265 aa		10.43	□□□□□ -0.74
SCAPER-223	ENST00000569784	PI16	Q6UXB8	463 aa		10.43	□□□□□ -0.74
SCAPER-223	ENST00000569784	CCAR1	Q8IX12	1150 aa	Known RBP	10.43	□□□□□ -0.74
SCAPER-223	ENST00000569784	DPF3	Q92784	378 aa		10.43	□□□□□ -0.74
SCAPER-223	ENST00000569784	COA7	Q96BR5	231 aa		10.43	□□□□□ -0.74
SCAPER-223	ENST00000569784	NSUN4	Q96CB9	384 aa	Known RBP	10.43	□□□□□ -0.74
SCAPER-223	ENST00000569784	TBC1D2	Q9BYX2	928 aa		10.43	□□□□□ -0.74
SCAPER-223	ENST00000569784	OSBPL5	Q9H0X9	879 aa	Predicted RBP	10.43	□□□□□ -0.74
SCAPER-223	ENST00000569784	CWC22	Q9HCG8	908 aa	Known RBP	10.43	□□□□□ -0.74
SCAPER-223	ENST00000569784	DDX4	Q9NQI0	724 aa	Known RBP	10.43	□□□□□ -0.74
SCAPER-223	ENST00000569784	TMOD4	Q9NZQ9	345 aa		10.43	□□□□□ -0.74
SCAPER-223	ENST00000569784	SRRD	Q9UH36	339 aa		10.43	□□□□□ -0.74
SCAPER-223	ENST00000569784	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.43	□□□□□ -0.74
SCAPER-223	ENST00000569784	FPGT-TNNI3K	V9GXZ4	949 aa		10.43	□□□□□ -0.74
SCAPER-223	ENST00000569784	MGAM	O43451	1857 aa		10.42	□□□□□ -0.74
SCAPER-223	ENST00000569784	ATAD5	Q96QE3	1844 aa		10.42	□□□□□ -0.74
SCAPER-223	ENST00000569784		A0A0G2JLL6	359 aa	Predicted RBP	10.42	□□□□□ -0.74
SCAPER-223	ENST00000569784	FAM196B	A6NMK8	535 aa		10.42	□□□□□ -0.74
SCAPER-223	ENST00000569784	PHF20L1	A8MW92	1017 aa		10.42	□□□□□ -0.74
SCAPER-223	ENST00000569784	MS4A1	P11836	297 aa		10.42	□□□□□ -0.74
SCAPER-223	ENST00000569784	PRRT2	Q7Z6L0	340 aa	Predicted RBP	10.42	□□□□□ -0.74
SCAPER-223	ENST00000569784	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	10.42	□□□□□ -0.74
SCAPER-223	ENST00000569784	TGFBRAP1	Q8WUH2	860 aa		10.42	□□□□□ -0.74
SCAPER-223	ENST00000569784	DBNDD2	Q9BQY9	259 aa		10.42	□□□□□ -0.74
SCAPER-223	ENST00000569784	RNF208	Q9H0X6	261 aa		10.42	□□□□□ -0.74
SCAPER-223	ENST00000569784	DHX36	Q9H2U1	1008 aa	Known RBP	10.42	□□□□□ -0.74
SCAPER-223	ENST00000569784	PI4KB	Q9UBF8	816 aa		10.42	□□□□□ -0.74
SCAPER-223	ENST00000569784	AFG3L2	Q9Y4W6	797 aa		10.42	□□□□□ -0.74
SCAPER-223	ENST00000569784	MAST2	Q6P0Q8	1798 aa		10.42	□□□□□ -0.74
SCAPER-223	ENST00000569784	USP17L5	A8MUK1	530 aa		10.41	□□□□□ -0.74
SCAPER-223	ENST00000569784	TBC1D12	O60347	775 aa		10.41	□□□□□ -0.74
SCAPER-223	ENST00000569784	IDH1	O75874	414 aa	Known RBP	10.41	□□□□□ -0.74
SCAPER-223	ENST00000569784	IRX3	P78415	501 aa	Predicted RBP	10.41	□□□□□ -0.74
SCAPER-223	ENST00000569784	PRKCZ	Q05513	592 aa		10.41	□□□□□ -0.74
SCAPER-223	ENST00000569784	SPP2	Q13103	211 aa		10.41	□□□□□ -0.74
SCAPER-223	ENST00000569784	HSP90AB4P	Q58FF6	505 aa		10.41	□□□□□ -0.74
SCAPER-223	ENST00000569784	SH3BP5L	Q7L8J4	393 aa		10.41	□□□□□ -0.74
SCAPER-223	ENST00000569784	CCDC84	Q86UT8	332 aa	Predicted RBP	10.41	□□□□□ -0.74
SCAPER-223	ENST00000569784	ERC1	Q8IUD2	1116 aa		10.41	□□□□□ -0.74
SCAPER-223	ENST00000569784	MAPKAPK5	Q8IW41	473 aa		10.41	□□□□□ -0.74
SCAPER-223	ENST00000569784	ANKRD13C	Q8N6S4	541 aa		10.41	□□□□□ -0.74
SCAPER-223	ENST00000569784	CCDC8	Q9H0W5	538 aa	Predicted RBP	10.41	□□□□□ -0.74
SCAPER-223	ENST00000569784	GPR108	Q9NPR9	543 aa		10.41	□□□□□ -0.74
SCAPER-223	ENST00000569784	PLSCR2	Q9NRY7	297 aa		10.41	□□□□□ -0.74
SCAPER-223	ENST00000569784	HERC5	Q9UII4	1024 aa	Known RBP	10.41	□□□□□ -0.74
SCAPER-223	ENST00000569784	AGTPBP1	Q9UPW5	1226 aa		10.41	□□□□□ -0.74
SCAPER-223	ENST00000569784	SLC45A1	Q9Y2W3	748 aa		10.41	□□□□□ -0.74
SCAPER-223	ENST00000569784	APBB1	O00213	710 aa		10.4	□□□□□ -0.74
SCAPER-223	ENST00000569784	ADCY3	O60266	1144 aa		10.4	□□□□□ -0.74
SCAPER-223	ENST00000569784	EVI5	O60447	810 aa		10.4	□□□□□ -0.74
SCAPER-223	ENST00000569784	CCL5	P13501	91 aa		10.4	□□□□□ -0.74
SCAPER-223	ENST00000569784	CYP7A1	P22680	504 aa		10.4	□□□□□ -0.74
SCAPER-223	ENST00000569784	CAP2	P40123	477 aa		10.4	□□□□□ -0.74
SCAPER-223	ENST00000569784	ZAP70	P43403	619 aa		10.4	□□□□□ -0.74
SCAPER-223	ENST00000569784	HMGCS2	P54868	508 aa		10.4	□□□□□ -0.74
SCAPER-223	ENST00000569784	RHBDL3	P58872	404 aa		10.4	□□□□□ -0.74
SCAPER-223	ENST00000569784	CAP1	Q01518	475 aa		10.4	□□□□□ -0.74
SCAPER-223	ENST00000569784	GPAT2	Q6NUI2	795 aa		10.4	□□□□□ -0.74
SCAPER-223	ENST00000569784	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.4	□□□□□ -0.74
SCAPER-223	ENST00000569784	ZNF280C	Q8ND82	737 aa		10.4	□□□□□ -0.74
SCAPER-223	ENST00000569784	HTATIP2	Q9BUP3	242 aa		10.4	□□□□□ -0.74
SCAPER-223	ENST00000569784	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	10.4	□□□□□ -0.74
SCAPER-223	ENST00000569784	SAP30BP	Q9UHR5	308 aa	Known RBP	10.4	□□□□□ -0.74
SCAPER-223	ENST00000569784	POTEB3	A0JP26	581 aa		10.39	□□□□□ -0.75
SCAPER-223	ENST00000569784	TFRC	P02786	760 aa	Known RBP	10.39	□□□□□ -0.75
SCAPER-223	ENST00000569784	ASNS	P08243	561 aa		10.39	□□□□□ -0.75
SCAPER-223	ENST00000569784	SLURP2	P0DP57	97 aa		10.39	□□□□□ -0.75
SCAPER-223	ENST00000569784	GCLC	P48506	637 aa	Predicted RBP	10.39	□□□□□ -0.75
SCAPER-223	ENST00000569784	MAP3K12	Q12852	859 aa		10.39	□□□□□ -0.75
SCAPER-223	ENST00000569784	POTEB	Q6S5H4	581 aa		10.39	□□□□□ -0.75
SCAPER-223	ENST00000569784	AACS	Q86V21	672 aa		10.39	□□□□□ -0.75
SCAPER-223	ENST00000569784	CERS3	Q8IU89	383 aa		10.39	□□□□□ -0.75
SCAPER-223	ENST00000569784	FOXP4	Q8IVH2	680 aa	Predicted RBP	10.39	□□□□□ -0.75
SCAPER-223	ENST00000569784	SSH3	Q8TE77	659 aa		10.39	□□□□□ -0.75
SCAPER-223	ENST00000569784	FEZ1	Q99689	392 aa		10.39	□□□□□ -0.75
SCAPER-223	ENST00000569784	CHMP4B	Q9H444	224 aa	Known RBP	10.39	□□□□□ -0.75
SCAPER-223	ENST00000569784	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	10.39	□□□□□ -0.75
SCAPER-223	ENST00000569784	ATRNL1	Q5VV63	1379 aa		10.39	□□□□□ -0.75
SCAPER-223	ENST00000569784	PHIP	Q8WWQ0	1821 aa		10.38	□□□□□ -0.75
SCAPER-223	ENST00000569784	HMMR	O75330	724 aa		10.38	□□□□□ -0.75
SCAPER-223	ENST00000569784	CYP2E1	P05181	493 aa	Predicted RBP	10.38	□□□□□ -0.75
SCAPER-223	ENST00000569784	BCR	P11274	1271 aa		10.38	□□□□□ -0.75
SCAPER-223	ENST00000569784	FLT3LG	P49771	235 aa		10.38	□□□□□ -0.75
SCAPER-223	ENST00000569784	MTFR1	Q15390	333 aa		10.38	□□□□□ -0.75
SCAPER-223	ENST00000569784	TREML2	Q5T2D2	321 aa		10.38	□□□□□ -0.75
SCAPER-223	ENST00000569784	MAGEB6	Q8N7X4	407 aa		10.38	□□□□□ -0.75
SCAPER-223	ENST00000569784	GABRQ	Q9UN88	632 aa		10.38	□□□□□ -0.75
SCAPER-223	ENST00000569784	EXOC6B	Q9Y2D4	811 aa		10.38	□□□□□ -0.75

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