RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 RCAN3Q9UKA8 241 aa16.88■□□□□ 0.29
GTF3C1-211ENST00000569653 TRIOBPQ9H2D6 2365 aa16.88■□□□□ 0.29
GTF3C1-211ENST00000569653 TCRBV5S4A2TA0A5A2 114 aa16.87■□□□□ 0.29
GTF3C1-211ENST00000569653 TNPO2O14787 897 aaKnown RBP16.87■□□□□ 0.29
GTF3C1-211ENST00000569653 ADCY3O60266 1144 aa16.87■□□□□ 0.29
GTF3C1-211ENST00000569653 IGSF3O75054 1194 aa16.87■□□□□ 0.29
GTF3C1-211ENST00000569653 CHGBP05060 677 aa16.87■□□□□ 0.29
GTF3C1-211ENST00000569653 ASNSP08243 561 aa16.87■□□□□ 0.29
GTF3C1-211ENST00000569653 PDE6AP16499 860 aa16.87■□□□□ 0.29
GTF3C1-211ENST00000569653 BACE1P56817 501 aa16.87■□□□□ 0.29
GTF3C1-211ENST00000569653 TBC1D2Q9BYX2 928 aa16.87■□□□□ 0.29
GTF3C1-211ENST00000569653 TXNRD2Q9NNW7 524 aa16.87■□□□□ 0.29
GTF3C1-211ENST00000569653 GH2P01242 217 aa16.86■□□□□ 0.29
GTF3C1-211ENST00000569653 INHAP05111 366 aa16.86■□□□□ 0.29
GTF3C1-211ENST00000569653 PLCD1P51178 756 aa16.86■□□□□ 0.29
GTF3C1-211ENST00000569653 TATDN1Q6P1N9 297 aa16.86■□□□□ 0.29
GTF3C1-211ENST00000569653 RPAP2Q8IXW5 612 aaPredicted RBP16.86■□□□□ 0.29
GTF3C1-211ENST00000569653 CRACR2BQ8N4Y2 399 aaPredicted RBP16.86■□□□□ 0.29
GTF3C1-211ENST00000569653 SLAIN1Q8ND83 568 aa16.86■□□□□ 0.29
GTF3C1-211ENST00000569653 KIF1BPQ96EK5 621 aa16.86■□□□□ 0.29
GTF3C1-211ENST00000569653 EMILIN3Q9NT22 766 aa16.86■□□□□ 0.29
GTF3C1-211ENST00000569653 PNMA3Q9UL41 463 aa16.86■□□□□ 0.29
GTF3C1-211ENST00000569653 DDX19BQ9UMR2 479 aa16.86■□□□□ 0.29
GTF3C1-211ENST00000569653 MYH8P13535 1937 aa16.86■□□□□ 0.29
GTF3C1-211ENST00000569653 RLFQ13129 1914 aa16.86■□□□□ 0.29
GTF3C1-211ENST00000569653 SMIM22K7EJ46 135 aa16.85■□□□□ 0.29
GTF3C1-211ENST00000569653 GOLIM4O00461 696 aa16.85■□□□□ 0.29
GTF3C1-211ENST00000569653 GJB1P08034 283 aa16.85■□□□□ 0.29
GTF3C1-211ENST00000569653 GUCY1A2P33402 732 aa16.85■□□□□ 0.29
GTF3C1-211ENST00000569653 SHMT1P34896 483 aa16.85■□□□□ 0.29
GTF3C1-211ENST00000569653 USP5P45974 858 aa16.85■□□□□ 0.29
GTF3C1-211ENST00000569653 GJA8P48165 433 aa16.85■□□□□ 0.29
GTF3C1-211ENST00000569653 MAP3K12Q12852 859 aa16.85■□□□□ 0.29
GTF3C1-211ENST00000569653 IRF5Q13568 498 aa16.85■□□□□ 0.29
GTF3C1-211ENST00000569653 P2RX7Q99572 595 aaKnown RBP16.85■□□□□ 0.29
GTF3C1-211ENST00000569653 RNF208Q9H0X6 261 aa16.85■□□□□ 0.29
GTF3C1-211ENST00000569653 EHD4Q9H223 541 aa16.85■□□□□ 0.29
GTF3C1-211ENST00000569653 AS3MTQ9HBK9 375 aa16.85■□□□□ 0.29
GTF3C1-211ENST00000569653 GJD2Q9UKL4 321 aa16.85■□□□□ 0.29
GTF3C1-211ENST00000569653 HOXA7P31268 230 aaPredicted RBP16.84■□□□□ 0.29
GTF3C1-211ENST00000569653 GCLCP48506 637 aaPredicted RBP16.84■□□□□ 0.29
GTF3C1-211ENST00000569653 TRIM32Q13049 653 aa16.84■□□□□ 0.29
GTF3C1-211ENST00000569653 HSP90AB4PQ58FF6 505 aa16.84■□□□□ 0.29
GTF3C1-211ENST00000569653 LCORLQ8N3X6 602 aa16.84■□□□□ 0.29
GTF3C1-211ENST00000569653 ACER1Q8TDN7 264 aa16.84■□□□□ 0.29
GTF3C1-211ENST00000569653 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.84■□□□□ 0.29
GTF3C1-211ENST00000569653 DNAJC2Q99543 621 aaKnown RBP16.84■□□□□ 0.29
GTF3C1-211ENST00000569653 BCL11AQ9H165 835 aa16.84■□□□□ 0.29
GTF3C1-211ENST00000569653 MORF4L1Q9UBU8 362 aa16.84■□□□□ 0.29
GTF3C1-211ENST00000569653 ZNF532Q9HCE3 1301 aa16.84■□□□□ 0.29
GTF3C1-211ENST00000569653 HLA-DOAP06340 250 aa16.83■□□□□ 0.28
GTF3C1-211ENST00000569653 CYP2D6P10635 497 aa16.83■□□□□ 0.28
GTF3C1-211ENST00000569653 MS4A1P11836 297 aa16.83■□□□□ 0.28
GTF3C1-211ENST00000569653 GABPAQ06546 454 aa16.83■□□□□ 0.28
GTF3C1-211ENST00000569653 SLC9C2Q5TAH2 1124 aa16.83■□□□□ 0.28
GTF3C1-211ENST00000569653 CLASRPQ8N2M8 674 aaKnown RBP16.83■□□□□ 0.28
GTF3C1-211ENST00000569653 PXYLP1Q8TE99 480 aa16.83■□□□□ 0.28
GTF3C1-211ENST00000569653 U2AF1L4Q8WU68 220 aaKnown RBP16.83■□□□□ 0.28
GTF3C1-211ENST00000569653 RBPJLQ9UBG7 517 aa16.83■□□□□ 0.28
GTF3C1-211ENST00000569653 BIN2Q9UBW5 565 aaPredicted RBP16.83■□□□□ 0.28
GTF3C1-211ENST00000569653 SERPINB13Q9UIV8 391 aa16.83■□□□□ 0.28
GTF3C1-211ENST00000569653 PARP14Q460N5 1801 aa16.82■□□□□ 0.28
GTF3C1-211ENST00000569653 MAGEB6P1A0A0J9YX57 407 aa16.82■□□□□ 0.28
GTF3C1-211ENST00000569653 USP17L10C9JJH3 530 aa16.82■□□□□ 0.28
GTF3C1-211ENST00000569653 H0YGN5 161 aa16.82■□□□□ 0.28
GTF3C1-211ENST00000569653 SMARCA5O60264 1052 aaPredicted RBP16.82■□□□□ 0.28
GTF3C1-211ENST00000569653 HERVK_113P62684 666 aa16.82■□□□□ 0.28
GTF3C1-211ENST00000569653 Q3C1V9 767 aa16.82■□□□□ 0.28
GTF3C1-211ENST00000569653 HABP4Q5JVS0 413 aaKnown RBP16.82■□□□□ 0.28
GTF3C1-211ENST00000569653 SDR42E1Q8WUS8 393 aa16.82■□□□□ 0.28
GTF3C1-211ENST00000569653 PAK6Q9NQU5 681 aaPredicted RBP16.82■□□□□ 0.28
GTF3C1-211ENST00000569653 GINM1Q9NU53 330 aa16.82■□□□□ 0.28
GTF3C1-211ENST00000569653 C19orf81C9J6K1 198 aa16.81■□□□□ 0.28
GTF3C1-211ENST00000569653 PRKAB2O43741 272 aa16.81■□□□□ 0.28
GTF3C1-211ENST00000569653 HMMRO75330 724 aa16.81■□□□□ 0.28
GTF3C1-211ENST00000569653 CNMDO75829 334 aa16.81■□□□□ 0.28
GTF3C1-211ENST00000569653 IFIT2P09913 472 aaKnown RBP16.81■□□□□ 0.28
GTF3C1-211ENST00000569653 UBXN2AP68543 259 aa16.81■□□□□ 0.28
GTF3C1-211ENST00000569653 IRX3P78415 501 aaPredicted RBP16.81■□□□□ 0.28
GTF3C1-211ENST00000569653 PABPC4Q13310 644 aaKnown RBP eCLIP16.81■□□□□ 0.289e-6■■■■□ 24.7
GTF3C1-211ENST00000569653 ZYXQ15942 572 aaKnown RBP16.81■□□□□ 0.28
GTF3C1-211ENST00000569653 SLC44A5Q8NCS7 719 aa16.81■□□□□ 0.28
GTF3C1-211ENST00000569653 COA7Q96BR5 231 aa16.81■□□□□ 0.28
GTF3C1-211ENST00000569653 C12orf42Q96LP6 360 aa16.81■□□□□ 0.28
GTF3C1-211ENST00000569653 TRIM34Q9BYJ4 488 aa16.81■□□□□ 0.28
GTF3C1-211ENST00000569653 PORCNQ9H237 461 aa16.81■□□□□ 0.28
GTF3C1-211ENST00000569653 BOLA2Q9H3K6 86 aa16.81■□□□□ 0.28
GTF3C1-211ENST00000569653 TMOD4Q9NZQ9 345 aa16.81■□□□□ 0.28
GTF3C1-211ENST00000569653 TAOK2Q9UL54 1235 aa16.81■□□□□ 0.28
GTF3C1-211ENST00000569653 SZT2Q5T011 3432 aa16.8■□□□□ 0.28
GTF3C1-211ENST00000569653 A0A0G2JMZ2 1700 aa16.8■□□□□ 0.28
GTF3C1-211ENST00000569653 RAB11FIP3O75154 756 aa16.8■□□□□ 0.28
GTF3C1-211ENST00000569653 SGPL1O95470 568 aa16.8■□□□□ 0.28
GTF3C1-211ENST00000569653 TTF1Q15361 905 aaPredicted RBP16.8■□□□□ 0.28
GTF3C1-211ENST00000569653 TMED8Q6PL24 325 aaPredicted RBP16.8■□□□□ 0.28
GTF3C1-211ENST00000569653 CERS3Q8IU89 383 aa16.8■□□□□ 0.28
GTF3C1-211ENST00000569653 TRIB2Q92519 343 aa16.8■□□□□ 0.28
GTF3C1-211ENST00000569653 DEFB118Q96PH6 123 aa16.8■□□□□ 0.28
GTF3C1-211ENST00000569653 ARMT1Q9H993 441 aa16.8■□□□□ 0.28
GTF3C1-211ENST00000569653 DCP1AQ9NPI6 582 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms