RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 AAMPQ13685 434 aa10.85□□□□□ -0.67
GTF3C1-210ENST00000569394 RAB3GAP1Q15042 981 aa10.85□□□□□ -0.67
GTF3C1-210ENST00000569394 UBE3CQ15386 1083 aa10.85□□□□□ -0.67
GTF3C1-210ENST00000569394 OTUD7BQ6GQQ9 843 aa10.85□□□□□ -0.67
GTF3C1-210ENST00000569394 FOXP4Q8IVH2 680 aaPredicted RBP10.85□□□□□ -0.67
GTF3C1-210ENST00000569394 REM2Q8IYK8 340 aaPredicted RBP10.85□□□□□ -0.67
GTF3C1-210ENST00000569394 SALL3Q9BXA9 1300 aa10.84□□□□□ -0.67
GTF3C1-210ENST00000569394 UNCXA6NJT0 531 aa10.84□□□□□ -0.67
GTF3C1-210ENST00000569394 USP17L12C9JPN9 530 aa10.84□□□□□ -0.67
GTF3C1-210ENST00000569394 USP17L21D6R901 530 aa10.84□□□□□ -0.67
GTF3C1-210ENST00000569394 PDHXO00330 501 aa10.84□□□□□ -0.67
GTF3C1-210ENST00000569394 GPAA1O43292 621 aa10.84□□□□□ -0.67
GTF3C1-210ENST00000569394 TBC1D12O60347 775 aa10.84□□□□□ -0.67
GTF3C1-210ENST00000569394 GH2P01242 217 aa10.84□□□□□ -0.67
GTF3C1-210ENST00000569394 CYP2C8P10632 490 aa10.84□□□□□ -0.67
GTF3C1-210ENST00000569394 PDE4AP27815 886 aa10.84□□□□□ -0.67
GTF3C1-210ENST00000569394 INHBEP58166 350 aa10.84□□□□□ -0.67
GTF3C1-210ENST00000569394 NOL9Q5SY16 702 aaKnown RBP10.84□□□□□ -0.67
GTF3C1-210ENST00000569394 TTC6Q86TZ1 520 aa10.84□□□□□ -0.67
GTF3C1-210ENST00000569394 PLEKHM2Q8IWE5 1019 aa10.84□□□□□ -0.67
GTF3C1-210ENST00000569394 SPRYD3Q8NCJ5 442 aa10.84□□□□□ -0.67
GTF3C1-210ENST00000569394 APPBP2Q92624 585 aa10.84□□□□□ -0.67
GTF3C1-210ENST00000569394 DDRGK1Q96HY6 314 aa10.84□□□□□ -0.67
GTF3C1-210ENST00000569394 ABHD8Q96I13 439 aa10.84□□□□□ -0.67
GTF3C1-210ENST00000569394 TSHZ2Q9NRE2 1034 aa10.84□□□□□ -0.67
GTF3C1-210ENST00000569394 SAGE1Q9NXZ1 904 aa10.84□□□□□ -0.67
GTF3C1-210ENST00000569394 CPA4Q9UI42 421 aa10.84□□□□□ -0.67
GTF3C1-210ENST00000569394 HERC5Q9UII4 1024 aaKnown RBP10.84□□□□□ -0.67
GTF3C1-210ENST00000569394 SERPINB13Q9UIV8 391 aa10.84□□□□□ -0.67
GTF3C1-210ENST00000569394 TDO2P48775 406 aa10.83□□□□□ -0.68
GTF3C1-210ENST00000569394 HMGCS2P54868 508 aa10.83□□□□□ -0.68
GTF3C1-210ENST00000569394 MAP3K10Q02779 954 aa10.83□□□□□ -0.68
GTF3C1-210ENST00000569394 CERKLQ49MI3 558 aaPredicted RBP10.83□□□□□ -0.68
GTF3C1-210ENST00000569394 CLEC10AQ8IUN9 316 aa10.83□□□□□ -0.68
GTF3C1-210ENST00000569394 CD99L2Q8TCZ2 262 aa10.83□□□□□ -0.68
GTF3C1-210ENST00000569394 FAM227BQ96M60 508 aa10.83□□□□□ -0.68
GTF3C1-210ENST00000569394 STRBPQ96SI9 672 aaKnown RBP10.83□□□□□ -0.68
GTF3C1-210ENST00000569394 ZFYVE28Q9HCC9 887 aa10.83□□□□□ -0.68
GTF3C1-210ENST00000569394 AFG3L2Q9Y4W6 797 aa10.83□□□□□ -0.68
GTF3C1-210ENST00000569394 PHIPQ8WWQ0 1821 aa10.82□□□□□ -0.68
GTF3C1-210ENST00000569394 TESPA1A2RU30 521 aaPredicted RBP10.82□□□□□ -0.68
GTF3C1-210ENST00000569394 USP17L5A8MUK1 530 aa10.82□□□□□ -0.68
GTF3C1-210ENST00000569394 RAD21O60216 631 aa10.82□□□□□ -0.68
GTF3C1-210ENST00000569394 FKTNO75072 461 aa10.82□□□□□ -0.68
GTF3C1-210ENST00000569394 ALDH1A1P00352 501 aa10.82□□□□□ -0.68
GTF3C1-210ENST00000569394 PRKCSHP14314 528 aaPredicted RBP10.82□□□□□ -0.68
GTF3C1-210ENST00000569394 SHMT1P34896 483 aa10.82□□□□□ -0.68
GTF3C1-210ENST00000569394 ATP2B2Q01814 1243 aa10.82□□□□□ -0.68
GTF3C1-210ENST00000569394 MTMR2Q13614 643 aa10.82□□□□□ -0.68
GTF3C1-210ENST00000569394 ABCB5Q2M3G0 1257 aa10.82□□□□□ -0.68
GTF3C1-210ENST00000569394 TREML2Q5T2D2 321 aa10.82□□□□□ -0.68
GTF3C1-210ENST00000569394 CTR9Q6PD62 1173 aa10.82□□□□□ -0.68
GTF3C1-210ENST00000569394 CERS3Q8IU89 383 aa10.82□□□□□ -0.68
GTF3C1-210ENST00000569394 AMOTL1Q8IY63 956 aa10.82□□□□□ -0.68
GTF3C1-210ENST00000569394 ZNF280CQ8ND82 737 aa10.82□□□□□ -0.68
GTF3C1-210ENST00000569394 CHMP4CQ96CF2 233 aa10.82□□□□□ -0.68
GTF3C1-210ENST00000569394 EVI5LQ96CN4 794 aa10.82□□□□□ -0.68
GTF3C1-210ENST00000569394 MCOLN1Q9GZU1 580 aa10.82□□□□□ -0.68
GTF3C1-210ENST00000569394 STAP2Q9UGK3 403 aa10.82□□□□□ -0.68
GTF3C1-210ENST00000569394 ZBTB21Q9ULJ3 1066 aa10.82□□□□□ -0.68
GTF3C1-210ENST00000569394 MYH8P13535 1937 aa10.82□□□□□ -0.68
GTF3C1-210ENST00000569394 COL2A1P02458 1487 aaPredicted RBP10.81□□□□□ -0.68
GTF3C1-210ENST00000569394 A0A0D9SFI3 127 aa10.81□□□□□ -0.68
GTF3C1-210ENST00000569394 CCDC85CA6NKD9 419 aa10.81□□□□□ -0.68
GTF3C1-210ENST00000569394 GSG1L2A8MUP6 293 aa10.81□□□□□ -0.68
GTF3C1-210ENST00000569394 PEX10O60683 326 aa10.81□□□□□ -0.68
GTF3C1-210ENST00000569394 IGSF3O75054 1194 aa10.81□□□□□ -0.68
GTF3C1-210ENST00000569394 PRDM1O75626 825 aa10.81□□□□□ -0.68
GTF3C1-210ENST00000569394 ZFYP08048 801 aaPredicted RBP10.81□□□□□ -0.68
GTF3C1-210ENST00000569394 ASNSP08243 561 aa10.81□□□□□ -0.68
GTF3C1-210ENST00000569394 NMIQ13287 307 aaPredicted RBP10.81□□□□□ -0.68
GTF3C1-210ENST00000569394 MOGSQ13724 837 aa10.81□□□□□ -0.68
GTF3C1-210ENST00000569394 SEPT2Q15019 361 aa10.81□□□□□ -0.68
GTF3C1-210ENST00000569394 LRRFIP1Q32MZ4 808 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-210ENST00000569394 ZMYM1Q5SVZ6 1142 aa10.81□□□□□ -0.68
GTF3C1-210ENST00000569394 VPS53Q5VIR6 699 aa10.81□□□□□ -0.68
GTF3C1-210ENST00000569394 GPAT2Q6NUI2 795 aa10.81□□□□□ -0.68
GTF3C1-210ENST00000569394 FEZ1Q99689 392 aa10.81□□□□□ -0.68
GTF3C1-210ENST00000569394 AS3MTQ9HBK9 375 aa10.81□□□□□ -0.68
GTF3C1-210ENST00000569394 CABP5Q9NP86 173 aa10.81□□□□□ -0.68
GTF3C1-210ENST00000569394 ATP8A2Q9NTI2 1148 aa10.81□□□□□ -0.68
GTF3C1-210ENST00000569394 PCDH10Q9P2E7 1040 aa10.81□□□□□ -0.68
GTF3C1-210ENST00000569394 KCNH4Q9UQ05 1017 aa10.81□□□□□ -0.68
GTF3C1-210ENST00000569394 TRIM17Q9Y577 477 aa10.81□□□□□ -0.68
GTF3C1-210ENST00000569394 ZSWIM8A7E2V4 1837 aa10.81□□□□□ -0.68
GTF3C1-210ENST00000569394 A0A0G2JLL6 359 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-210ENST00000569394 CXCL11O14625 94 aa10.8□□□□□ -0.68
GTF3C1-210ENST00000569394 MYCP01106 439 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-210ENST00000569394 AKR1B1P15121 316 aa10.8□□□□□ -0.68
GTF3C1-210ENST00000569394 CDK8P49336 464 aa10.8□□□□□ -0.68
GTF3C1-210ENST00000569394 RGS19P49795 217 aa10.8□□□□□ -0.68
GTF3C1-210ENST00000569394 CAP1Q01518 475 aa10.8□□□□□ -0.68
GTF3C1-210ENST00000569394 SP3Q02447 781 aa10.8□□□□□ -0.68
GTF3C1-210ENST00000569394 MLLT1Q03111 559 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-210ENST00000569394 C12orf60Q5U649 245 aa10.8□□□□□ -0.68
GTF3C1-210ENST00000569394 CWC27Q6UX04 472 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-210ENST00000569394 FASTKD5Q7L8L6 764 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-210ENST00000569394 PRRT2Q7Z6L0 340 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-210ENST00000569394 HS6ST3Q8IZP7 471 aa10.8□□□□□ -0.68
GTF3C1-210ENST00000569394 ACER1Q8TDN7 264 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms