RNA–Protein interactions for RNA: ENST00000569374.1

CCDC113-205, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-205ENST00000569374 SPATA32Q96LK8 384 aa10.38□□□□□ -0.75
CCDC113-205ENST00000569374 CUEDC1Q9NWM3 386 aaPredicted RBP10.38□□□□□ -0.75
CCDC113-205ENST00000569374 MARK1Q9P0L2 795 aa10.38□□□□□ -0.75
CCDC113-205ENST00000569374 POLKQ9UBT6 870 aa10.38□□□□□ -0.75
CCDC113-205ENST00000569374 SALL4Q9UJQ4 1053 aa10.38□□□□□ -0.75
CCDC113-205ENST00000569374 SCN11AQ9UI33 1791 aa10.37□□□□□ -0.75
CCDC113-205ENST00000569374 MAP3K6O95382 1288 aa10.37□□□□□ -0.75
CCDC113-205ENST00000569374 CYP2E1P05181 493 aaPredicted RBP10.37□□□□□ -0.75
CCDC113-205ENST00000569374 HMGB1P09429 215 aaKnown RBP10.37□□□□□ -0.75
CCDC113-205ENST00000569374 C4AP0C0L4 1744 aa10.37□□□□□ -0.75
CCDC113-205ENST00000569374 GTF2F1P35269 517 aaKnown RBP eCLIP10.37□□□□□ -0.75
CCDC113-205ENST00000569374 FCGRTP55899 365 aa10.37□□□□□ -0.75
CCDC113-205ENST00000569374 PLAURQ03405 335 aa10.37□□□□□ -0.75
CCDC113-205ENST00000569374 TNP2Q05952 138 aa10.37□□□□□ -0.75
CCDC113-205ENST00000569374 CCDC85BQ15834 202 aaPredicted RBP10.37□□□□□ -0.75
CCDC113-205ENST00000569374 DTHD1Q6ZMT9 781 aa10.37□□□□□ -0.75
CCDC113-205ENST00000569374 ZCRB1Q8TBF4 217 aaKnown RBP10.37□□□□□ -0.75
CCDC113-205ENST00000569374 SPACA7Q96KW9 195 aa10.37□□□□□ -0.75
CCDC113-205ENST00000569374 RSRP1Q9BUV0 290 aa10.37□□□□□ -0.75
CCDC113-205ENST00000569374 LIN7BQ9HAP6 207 aa10.37□□□□□ -0.75
CCDC113-205ENST00000569374 TLR7Q9NYK1 1049 aaKnown RBP10.37□□□□□ -0.75
CCDC113-205ENST00000569374 CGNL1Q0VF96 1302 aa10.36□□□□□ -0.75
CCDC113-205ENST00000569374 TJP1Q07157 1748 aa10.36□□□□□ -0.75
CCDC113-205ENST00000569374 MAPTP10636 758 aaKnown RBP10.36□□□□□ -0.75
CCDC113-205ENST00000569374 NFKB1P19838 968 aa10.36□□□□□ -0.75
CCDC113-205ENST00000569374 GJA8P48165 433 aa10.36□□□□□ -0.75
CCDC113-205ENST00000569374 SPEM2Q0P670 501 aa10.36□□□□□ -0.75
CCDC113-205ENST00000569374 EIF4A2Q14240 407 aaKnown RBP10.36□□□□□ -0.75
CCDC113-205ENST00000569374 SLC15A2Q16348 729 aa10.36□□□□□ -0.75
CCDC113-205ENST00000569374 PEAR1Q5VY43 1037 aaPredicted RBP10.36□□□□□ -0.75
CCDC113-205ENST00000569374 RELL1Q8IUW5 271 aa10.36□□□□□ -0.75
CCDC113-205ENST00000569374 GLIS3Q8NEA6 775 aa10.36□□□□□ -0.75
CCDC113-205ENST00000569374 OXCT2Q9BYC2 517 aaPredicted RBP10.36□□□□□ -0.75
CCDC113-205ENST00000569374 MYH14Q7Z406 1995 aaKnown RBP10.35□□□□□ -0.75
CCDC113-205ENST00000569374 PNPLA7Q6ZV29 1317 aa10.35□□□□□ -0.75
CCDC113-205ENST00000569374 KDM6AO15550 1401 aaPredicted RBP10.35□□□□□ -0.75
CCDC113-205ENST00000569374 TMEM238LA0A1B0GVL6 79 aa10.35□□□□□ -0.75
CCDC113-205ENST00000569374 KIF4AO95239 1232 aa10.35□□□□□ -0.75
CCDC113-205ENST00000569374 TRIM22Q8IYM9 498 aa10.35□□□□□ -0.75
CCDC113-205ENST00000569374 C3orf58Q8NDZ4 430 aa10.35□□□□□ -0.75
CCDC113-205ENST00000569374 GPRASP2Q96D09 838 aa10.35□□□□□ -0.75
CCDC113-205ENST00000569374 CEP44Q9C0F1 390 aa10.35□□□□□ -0.75
CCDC113-205ENST00000569374 PHF24Q9UPV7 400 aa10.35□□□□□ -0.75
CCDC113-205ENST00000569374 KIF24Q5T7B8 1368 aa10.35□□□□□ -0.75
CCDC113-205ENST00000569374 COL3A1P02461 1466 aaPredicted RBP10.35□□□□□ -0.75
CCDC113-205ENST00000569374 WASHC2AQ641Q2 1341 aa10.34□□□□□ -0.75
CCDC113-205ENST00000569374 NRG2O14511 850 aaPredicted RBP10.34□□□□□ -0.75
CCDC113-205ENST00000569374 HOXD8P13378 290 aaPredicted RBP10.34□□□□□ -0.75
CCDC113-205ENST00000569374 PTSQ03393 145 aa10.34□□□□□ -0.75
CCDC113-205ENST00000569374 OSMRQ99650 979 aa10.34□□□□□ -0.75
CCDC113-205ENST00000569374 LATS2Q9NRM7 1088 aa10.34□□□□□ -0.75
CCDC113-205ENST00000569374 KBTBD4Q9NVX7 518 aa10.34□□□□□ -0.75
CCDC113-205ENST00000569374 STK32BQ9NY57 414 aa10.34□□□□□ -0.75
CCDC113-205ENST00000569374 ZFATQ9P243 1243 aa10.34□□□□□ -0.75
CCDC113-205ENST00000569374 AKAP2Q9Y2D5 859 aa10.34□□□□□ -0.75
CCDC113-205ENST00000569374 UTRNP46939 3433 aa10.34□□□□□ -0.75
CCDC113-205ENST00000569374 PCDH11XQ9BZA7 1347 aa10.33□□□□□ -0.76
CCDC113-205ENST00000569374 PCDH11YQ9BZA8 1340 aa10.33□□□□□ -0.76
CCDC113-205ENST00000569374 KIAA1551Q9HCM1 1747 aa10.33□□□□□ -0.76
CCDC113-205ENST00000569374 SLC35F4A4IF30 521 aa10.33□□□□□ -0.76
CCDC113-205ENST00000569374 PAK2Q13177 524 aa10.33□□□□□ -0.76
CCDC113-205ENST00000569374 CNGB1Q14028 1251 aaPredicted RBP10.33□□□□□ -0.76
CCDC113-205ENST00000569374 PCSK7Q16549 785 aa10.33□□□□□ -0.76
CCDC113-205ENST00000569374 SV2BQ7L1I2 683 aa10.33□□□□□ -0.76
CCDC113-205ENST00000569374 DPH6Q7L8W6 267 aa10.33□□□□□ -0.76
CCDC113-205ENST00000569374 RAPGEF4Q8WZA2 1011 aa10.33□□□□□ -0.76
CCDC113-205ENST00000569374 DNAJC2Q99543 621 aaKnown RBP10.33□□□□□ -0.76
CCDC113-205ENST00000569374 SPON2Q9BUD6 331 aa10.33□□□□□ -0.76
CCDC113-205ENST00000569374 SPON1Q9HCB6 807 aa10.33□□□□□ -0.76
CCDC113-205ENST00000569374 ATP13A2Q9NQ11 1180 aa10.33□□□□□ -0.76
CCDC113-205ENST00000569374 ATXN7L1Q9ULK2 861 aaPredicted RBP10.33□□□□□ -0.76
CCDC113-205ENST00000569374 IGSF1Q8N6C5 1336 aa10.33□□□□□ -0.76
CCDC113-205ENST00000569374 ADAMTS7Q9UKP4 1686 aa10.32□□□□□ -0.76
CCDC113-205ENST00000569374 PALLDQ8WX93 1383 aa10.32□□□□□ -0.76
CCDC113-205ENST00000569374 CCNJLQ8IV13 435 aa10.32□□□□□ -0.76
CCDC113-205ENST00000569374 KIAA0825Q8IV33 1275 aa10.32□□□□□ -0.76
CCDC113-205ENST00000569374 DHX38Q92620 1227 aaKnown RBP10.32□□□□□ -0.76
CCDC113-205ENST00000569374 BHMTQ93088 406 aa10.32□□□□□ -0.76
CCDC113-205ENST00000569374 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.32□□□□□ -0.76
CCDC113-205ENST00000569374 ABCB6Q9NP58 842 aa10.32□□□□□ -0.76
CCDC113-205ENST00000569374 CHD4Q14839 1912 aa10.31□□□□□ -0.76
CCDC113-205ENST00000569374 BNIP3LO60238 219 aa10.31□□□□□ -0.76
CCDC113-205ENST00000569374 NRLP54845 237 aa10.31□□□□□ -0.76
CCDC113-205ENST00000569374 FOXR1Q6PIV2 292 aa10.31□□□□□ -0.76
CCDC113-205ENST00000569374 MPRIPQ6WCQ1 1025 aa10.31□□□□□ -0.76
CCDC113-205ENST00000569374 DHX32Q7L7V1 743 aaKnown RBP10.31□□□□□ -0.76
CCDC113-205ENST00000569374 FAM177A1Q8N128 213 aaPredicted RBP10.31□□□□□ -0.76
CCDC113-205ENST00000569374 KIFC2Q96AC6 838 aa10.31□□□□□ -0.76
CCDC113-205ENST00000569374 ZKSCAN3Q9BRR0 538 aa10.31□□□□□ -0.76
CCDC113-205ENST00000569374 SENP2Q9HC62 589 aa10.31□□□□□ -0.76
CCDC113-205ENST00000569374 COPRSQ9NQ92 184 aa10.31□□□□□ -0.76
CCDC113-205ENST00000569374 CCNL1Q9UK58 526 aaPredicted RBP10.31□□□□□ -0.76
CCDC113-205ENST00000569374 GOLGB1Q14789 3259 aaKnown RBP10.31□□□□□ -0.76
CCDC113-205ENST00000569374 SIPA1L3O60292 1781 aaPredicted RBP10.31□□□□□ -0.76
CCDC113-205ENST00000569374 KDRP35968 1356 aa10.3□□□□□ -0.76
CCDC113-205ENST00000569374 UBR2Q8IWV8 1755 aa10.3□□□□□ -0.76
CCDC113-205ENST00000569374 GFRA3O60609 400 aa10.3□□□□□ -0.76
CCDC113-205ENST00000569374 STK10O94804 968 aaKnown RBP10.3□□□□□ -0.76
CCDC113-205ENST00000569374 ATF4P18848 351 aaPredicted RBP10.3□□□□□ -0.76
CCDC113-205ENST00000569374 GBP2P32456 591 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms