RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 OTOP1Q7RTM1 612 aa11.27□□□□□ -0.61
UBR1-210ENST00000569337 ZNF280CQ8ND82 737 aa11.27□□□□□ -0.61
UBR1-210ENST00000569337 IL25Q9H293 177 aa11.27□□□□□ -0.61
UBR1-210ENST00000569337 DNAJC18Q9H819 358 aa11.27□□□□□ -0.61
UBR1-210ENST00000569337 ARMT1Q9H993 441 aa11.27□□□□□ -0.61
UBR1-210ENST00000569337 EFCC1Q9HA90 598 aa11.27□□□□□ -0.61
UBR1-210ENST00000569337 AS3MTQ9HBK9 375 aa11.27□□□□□ -0.61
UBR1-210ENST00000569337 SERPINB13Q9UIV8 391 aa11.27□□□□□ -0.61
UBR1-210ENST00000569337 RNF113AO15541 343 aaKnown RBP11.26□□□□□ -0.61
UBR1-210ENST00000569337 CHMLP26374 656 aa11.26□□□□□ -0.61
UBR1-210ENST00000569337 KIF22Q14807 665 aa11.26□□□□□ -0.61
UBR1-210ENST00000569337 GPAT2Q6NUI2 795 aa11.26□□□□□ -0.61
UBR1-210ENST00000569337 LCORLQ8N3X6 602 aa11.26□□□□□ -0.61
UBR1-210ENST00000569337 SDR42E1Q8WUS8 393 aa11.26□□□□□ -0.61
UBR1-210ENST00000569337 FAM227BQ96M60 508 aa11.26□□□□□ -0.61
UBR1-210ENST00000569337 SEC62Q99442 399 aaKnown RBP11.26□□□□□ -0.61
UBR1-210ENST00000569337 PARK7Q99497 189 aaKnown RBP11.26□□□□□ -0.61
UBR1-210ENST00000569337 EHD4Q9H223 541 aa11.26□□□□□ -0.61
UBR1-210ENST00000569337 GINM1Q9NU53 330 aa11.26□□□□□ -0.61
UBR1-210ENST00000569337 MCM9Q9NXL9 1143 aa11.26□□□□□ -0.61
UBR1-210ENST00000569337 CPA4Q9UI42 421 aa11.26□□□□□ -0.61
UBR1-210ENST00000569337 HPS5Q9UPZ3 1129 aa11.26□□□□□ -0.61
UBR1-210ENST00000569337 A0A0D9SFI3 127 aa11.25□□□□□ -0.61
UBR1-210ENST00000569337 MBD4O95243 580 aa11.25□□□□□ -0.61
UBR1-210ENST00000569337 GDF11O95390 407 aa11.25□□□□□ -0.61
UBR1-210ENST00000569337 CYP2C8P10632 490 aa11.25□□□□□ -0.61
UBR1-210ENST00000569337 PLCD1P51178 756 aa11.25□□□□□ -0.61
UBR1-210ENST00000569337 NMIQ13287 307 aaPredicted RBP11.25□□□□□ -0.61
UBR1-210ENST00000569337 ZMYM1Q5SVZ6 1142 aa11.25□□□□□ -0.61
UBR1-210ENST00000569337 C17orf99Q6UX52 265 aa11.25□□□□□ -0.61
UBR1-210ENST00000569337 OSBP2Q969R2 916 aa11.25□□□□□ -0.61
UBR1-210ENST00000569337 DDRGK1Q96HY6 314 aa11.25□□□□□ -0.61
UBR1-210ENST00000569337 PUS7LQ9H0K6 701 aaKnown RBP11.25□□□□□ -0.61
UBR1-210ENST00000569337 DCP1AQ9NPI6 582 aaPredicted RBP11.25□□□□□ -0.61
UBR1-210ENST00000569337 ATP8A2Q9NTI2 1148 aa11.25□□□□□ -0.61
UBR1-210ENST00000569337 SLC45A1Q9Y2W3 748 aa11.25□□□□□ -0.61
UBR1-210ENST00000569337 M0R2C6 588 aa11.24□□□□□ -0.61
UBR1-210ENST00000569337 PRKAB2O43741 272 aa11.24□□□□□ -0.61
UBR1-210ENST00000569337 CDC45O75419 566 aa11.24□□□□□ -0.61
UBR1-210ENST00000569337 HMGCS2P54868 508 aa11.24□□□□□ -0.61
UBR1-210ENST00000569337 JAG1P78504 1218 aa11.24□□□□□ -0.61
UBR1-210ENST00000569337 LRRFIP1Q32MZ4 808 aaKnown RBP11.24□□□□□ -0.61
UBR1-210ENST00000569337 C8orf34Q49A92 452 aa11.24□□□□□ -0.61
UBR1-210ENST00000569337 CERKLQ49MI3 558 aaPredicted RBP11.24□□□□□ -0.61
UBR1-210ENST00000569337 TATDN1Q6P1N9 297 aa11.24□□□□□ -0.61
UBR1-210ENST00000569337 AMOTL1Q8IY63 956 aa11.24□□□□□ -0.61
UBR1-210ENST00000569337 PROCA1Q8NCQ7 364 aaPredicted RBP11.24□□□□□ -0.61
UBR1-210ENST00000569337 WDR18Q9BV38 432 aa11.24□□□□□ -0.61
UBR1-210ENST00000569337 CABP5Q9NP86 173 aa11.24□□□□□ -0.61
UBR1-210ENST00000569337 ZBTB21Q9ULJ3 1066 aa11.24□□□□□ -0.61
UBR1-210ENST00000569337 AGTPBP1Q9UPW5 1226 aa11.24□□□□□ -0.61
UBR1-210ENST00000569337 FOCADQ5VW36 1801 aa11.23□□□□□ -0.61
UBR1-210ENST00000569337 BAZ2AQ9UIF9 1905 aaKnown RBP11.23□□□□□ -0.61
UBR1-210ENST00000569337 C19orf81C9J6K1 198 aa11.23□□□□□ -0.61
UBR1-210ENST00000569337 USP17L10C9JJH3 530 aa11.23□□□□□ -0.61
UBR1-210ENST00000569337 ECM2O94769 699 aaPredicted RBP11.23□□□□□ -0.61
UBR1-210ENST00000569337 GH2P01242 217 aa11.23□□□□□ -0.61
UBR1-210ENST00000569337 ZFYP08048 801 aaPredicted RBP11.23□□□□□ -0.61
UBR1-210ENST00000569337 BACE1P56817 501 aa11.23□□□□□ -0.61
UBR1-210ENST00000569337 LACTBP83111 547 aaPredicted RBP11.23□□□□□ -0.61
UBR1-210ENST00000569337 PABPC4Q13310 644 aaKnown RBP eCLIP11.23□□□□□ -0.61
UBR1-210ENST00000569337 MTMR2Q13614 643 aa11.23□□□□□ -0.61
UBR1-210ENST00000569337 SHROOM1Q2M3G4 852 aaPredicted RBP11.23□□□□□ -0.61
UBR1-210ENST00000569337 SH3D19Q5HYK7 790 aa11.23□□□□□ -0.61
UBR1-210ENST00000569337 TREML2Q5T2D2 321 aa11.23□□□□□ -0.61
UBR1-210ENST00000569337 CWC27Q6UX04 472 aaKnown RBP11.23□□□□□ -0.61
UBR1-210ENST00000569337 CCDC129Q6ZRS4 1044 aa11.23□□□□□ -0.61
UBR1-210ENST00000569337 TICAM2Q86XR7 235 aa11.23□□□□□ -0.61
UBR1-210ENST00000569337 SMCR8Q8TEV9 937 aaPredicted RBP11.23□□□□□ -0.61
UBR1-210ENST00000569337 TMOD4Q9NZQ9 345 aa11.23□□□□□ -0.61
UBR1-210ENST00000569337 PNMA3Q9UL41 463 aa11.23□□□□□ -0.61
UBR1-210ENST00000569337 PTPN22Q9Y2R2 807 aa11.23□□□□□ -0.61
UBR1-210ENST00000569337 SLC4A4Q9Y6R1 1079 aa11.23□□□□□ -0.61
UBR1-210ENST00000569337 FMNL1O95466 1100 aaPredicted RBP11.22□□□□□ -0.61
UBR1-210ENST00000569337 GNRH1P01148 92 aa11.22□□□□□ -0.61
UBR1-210ENST00000569337 OSBPP22059 807 aa11.22□□□□□ -0.61
UBR1-210ENST00000569337 SHMT1P34896 483 aa11.22□□□□□ -0.61
UBR1-210ENST00000569337 PSMC4P43686 418 aa11.22□□□□□ -0.61
UBR1-210ENST00000569337 CAP1Q01518 475 aa11.22□□□□□ -0.61
UBR1-210ENST00000569337 GABPAQ06546 454 aa11.22□□□□□ -0.61
UBR1-210ENST00000569337 RAB3GAP1Q15042 981 aa11.22□□□□□ -0.61
UBR1-210ENST00000569337 ABCB5Q2M3G0 1257 aa11.22□□□□□ -0.61
UBR1-210ENST00000569337 ZNF589Q86UQ0 364 aaPredicted RBP11.22□□□□□ -0.61
UBR1-210ENST00000569337 APPBP2Q92624 585 aa11.22□□□□□ -0.61
UBR1-210ENST00000569337 ARHGAP39Q9C0H5 1083 aa11.22□□□□□ -0.61
UBR1-210ENST00000569337 LAMB1P07942 1786 aa11.21□□□□□ -0.61
UBR1-210ENST00000569337 ADGRA2Q96PE1 1338 aa11.21□□□□□ -0.61
UBR1-210ENST00000569337 USP17L12C9JPN9 530 aa11.21□□□□□ -0.61
UBR1-210ENST00000569337 USP17L21D6R901 530 aa11.21□□□□□ -0.61
UBR1-210ENST00000569337 HIP1O00291 1037 aa11.21□□□□□ -0.61
UBR1-210ENST00000569337 MPHOSPH10O00566 681 aaKnown RBP11.21□□□□□ -0.61
UBR1-210ENST00000569337 FOXP2O15409 715 aa11.21□□□□□ -0.61
UBR1-210ENST00000569337 SGSM2O43147 1006 aa11.21□□□□□ -0.61
UBR1-210ENST00000569337 SEC24BO95487 1268 aa11.21□□□□□ -0.61
UBR1-210ENST00000569337 CYP2D6P10635 497 aa11.21□□□□□ -0.61
UBR1-210ENST00000569337 BCRP11274 1271 aa11.21□□□□□ -0.61
UBR1-210ENST00000569337 HOXD10P28358 340 aa11.21□□□□□ -0.61
UBR1-210ENST00000569337 MCMDC2Q4G0Z9 681 aa11.21□□□□□ -0.61
UBR1-210ENST00000569337 STRBPQ96SI9 672 aaKnown RBP11.21□□□□□ -0.61
UBR1-210ENST00000569337 FEZ1Q99689 392 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms