RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 IQSEC3Q9UPP2 1182 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-219ENST00000569136 JAG2Q9Y219 1238 aa11.28□□□□□ -0.6
CAPN3-219ENST00000569136 PPP2R3BQ9Y5P8 575 aa11.28□□□□□ -0.6
CAPN3-219ENST00000569136 PDS5AQ29RF7 1337 aaKnown RBP11.28□□□□□ -0.6
CAPN3-219ENST00000569136 LTBP1Q14766 1721 aa11.27□□□□□ -0.61
CAPN3-219ENST00000569136 TIAM2Q8IVF5 1701 aa11.27□□□□□ -0.61
CAPN3-219ENST00000569136 RAB11FIP3O75154 756 aa11.27□□□□□ -0.61
CAPN3-219ENST00000569136 PHKA1P46020 1223 aa11.27□□□□□ -0.61
CAPN3-219ENST00000569136 CRKP46108 304 aa11.27□□□□□ -0.61
CAPN3-219ENST00000569136 TNFAIP1Q13829 316 aa11.27□□□□□ -0.61
CAPN3-219ENST00000569136 AGERQ15109 404 aa11.27□□□□□ -0.61
CAPN3-219ENST00000569136 SUPT20HL1Q3ZLR7 823 aa11.27□□□□□ -0.61
CAPN3-219ENST00000569136 SAPCD2Q86UD0 394 aa11.27□□□□□ -0.61
CAPN3-219ENST00000569136 TRIM34Q9BYJ4 488 aa11.27□□□□□ -0.61
CAPN3-219ENST00000569136 GBA2Q9HCG7 927 aaPredicted RBP11.27□□□□□ -0.61
CAPN3-219ENST00000569136 NDUFB9Q9Y6M9 179 aa11.27□□□□□ -0.61
CAPN3-219ENST00000569136 SALL1Q9NSC2 1324 aa11.27□□□□□ -0.61
CAPN3-219ENST00000569136 MYH3P11055 1940 aa11.27□□□□□ -0.61
CAPN3-219ENST00000569136 LDHBP07195 334 aaKnown RBP11.26□□□□□ -0.61
CAPN3-219ENST00000569136 ADORA1P30542 326 aa11.26□□□□□ -0.61
CAPN3-219ENST00000569136 MAP2K2P36507 400 aa11.26□□□□□ -0.61
CAPN3-219ENST00000569136 FMR1Q06787 632 aaKnown RBP eCLIP11.26□□□□□ -0.61
CAPN3-219ENST00000569136 TNNI3KQ59H18 835 aa11.26□□□□□ -0.61
CAPN3-219ENST00000569136 FKBP1CQ5VVH2 108 aa11.26□□□□□ -0.61
CAPN3-219ENST00000569136 ZNF512BQ96KM6 892 aaPredicted RBP11.26□□□□□ -0.61
CAPN3-219ENST00000569136 ZDHHC15Q96MV8 337 aa11.26□□□□□ -0.61
CAPN3-219ENST00000569136 DEFB129Q9H1M3 183 aa11.26□□□□□ -0.61
CAPN3-219ENST00000569136 ZNF408Q9H9D4 720 aa11.26□□□□□ -0.61
CAPN3-219ENST00000569136 MKRN1Q9UHC7 482 aaKnown RBP11.26□□□□□ -0.61
CAPN3-219ENST00000569136 FKBPLQ9UIM3 349 aa11.26□□□□□ -0.61
CAPN3-219ENST00000569136 FPGT-TNNI3KV9GXZ4 949 aa11.26□□□□□ -0.61
CAPN3-219ENST00000569136 CNTNAP1P78357 1384 aa11.26□□□□□ -0.61
CAPN3-219ENST00000569136 UNCXA6NJT0 531 aa11.25□□□□□ -0.61
CAPN3-219ENST00000569136 ADM5C9JUS6 153 aa11.25□□□□□ -0.61
CAPN3-219ENST00000569136 RAD21O60216 631 aa11.25□□□□□ -0.61
CAPN3-219ENST00000569136 TNNI2P48788 182 aa11.25□□□□□ -0.61
CAPN3-219ENST00000569136 VEGFBP49765 207 aa11.25□□□□□ -0.61
CAPN3-219ENST00000569136 HUNKP57058 714 aa11.25□□□□□ -0.61
CAPN3-219ENST00000569136 AAMPQ13685 434 aa11.25□□□□□ -0.61
CAPN3-219ENST00000569136 C20orf194Q5TEA3 1177 aa11.25□□□□□ -0.61
CAPN3-219ENST00000569136 CDCA5Q96FF9 252 aa11.25□□□□□ -0.61
CAPN3-219ENST00000569136 ZNF70Q9UC06 446 aaPredicted RBP11.25□□□□□ -0.61
CAPN3-219ENST00000569136 ASTN2O75129 1339 aaPredicted RBP11.25□□□□□ -0.61
CAPN3-219ENST00000569136 PPP1R12BO60237 982 aaPredicted RBP11.24□□□□□ -0.61
CAPN3-219ENST00000569136 LDHCP07864 332 aa11.24□□□□□ -0.61
CAPN3-219ENST00000569136 ARID4AP29374 1257 aaPredicted RBP11.24□□□□□ -0.61
CAPN3-219ENST00000569136 ABL2P42684 1182 aa11.24□□□□□ -0.61
CAPN3-219ENST00000569136 RRP1P56182 461 aaKnown RBP11.24□□□□□ -0.61
CAPN3-219ENST00000569136 MAP2K1Q02750 393 aaPredicted RBP11.24□□□□□ -0.61
CAPN3-219ENST00000569136 RASGRF1Q13972 1273 aa11.24□□□□□ -0.61
CAPN3-219ENST00000569136 APOBEC3HQ6NTF7 200 aaKnown RBP11.24□□□□□ -0.61
CAPN3-219ENST00000569136 ARMC9Q7Z3E5 817 aa11.24□□□□□ -0.61
CAPN3-219ENST00000569136 CLASRPQ8N2M8 674 aaKnown RBP11.24□□□□□ -0.61
CAPN3-219ENST00000569136 SPATA5Q8NB90 893 aa11.24□□□□□ -0.61
CAPN3-219ENST00000569136 EMID1Q96A84 441 aaPredicted RBP11.24□□□□□ -0.61
CAPN3-219ENST00000569136 KIF1BPQ96EK5 621 aa11.24□□□□□ -0.61
CAPN3-219ENST00000569136 GDPD2Q9HCC8 539 aa11.24□□□□□ -0.61
CAPN3-219ENST00000569136 TMOD2Q9NZR1 351 aa11.24□□□□□ -0.61
CAPN3-219ENST00000569136 WDR33Q9C0J8 1336 aaKnown RBP11.24□□□□□ -0.61
CAPN3-219ENST00000569136 MAP4K4O95819 1239 aaPredicted RBP11.23□□□□□ -0.61
CAPN3-219ENST00000569136 GSTO1P78417 241 aa11.23□□□□□ -0.61
CAPN3-219ENST00000569136 TTC39AQ5SRH9 613 aa11.23□□□□□ -0.61
CAPN3-219ENST00000569136 SPRYD7Q5W111 196 aa11.23□□□□□ -0.61
CAPN3-219ENST00000569136 RGMBQ6NW40 437 aa11.23□□□□□ -0.61
CAPN3-219ENST00000569136 TMED8Q6PL24 325 aaPredicted RBP11.23□□□□□ -0.61
CAPN3-219ENST00000569136 ERICH6Q7L0X2 663 aa11.23□□□□□ -0.61
CAPN3-219ENST00000569136 SIRT2Q8IXJ6 389 aa11.23□□□□□ -0.61
CAPN3-219ENST00000569136 RHPN1Q8TCX5 695 aa11.23□□□□□ -0.61
CAPN3-219ENST00000569136 HOOK2Q96ED9 719 aa11.23□□□□□ -0.61
CAPN3-219ENST00000569136 CAPNS2Q96L46 248 aa11.23□□□□□ -0.61
CAPN3-219ENST00000569136 VEZTQ9HBM0 779 aa11.23□□□□□ -0.61
CAPN3-219ENST00000569136 ABCF2Q9UG63 623 aa11.23□□□□□ -0.61
CAPN3-219ENST00000569136 EXOC6BQ9Y2D4 811 aa11.23□□□□□ -0.61
CAPN3-219ENST00000569136 CLRN2A0PK11 232 aa11.22□□□□□ -0.61
CAPN3-219ENST00000569136 NOGQ13253 232 aa11.22□□□□□ -0.61
CAPN3-219ENST00000569136 RASA3Q14644 834 aa11.22□□□□□ -0.61
CAPN3-219ENST00000569136 GRIK5Q16478 980 aa11.22□□□□□ -0.61
CAPN3-219ENST00000569136 ZNF697Q5TEC3 545 aa11.22□□□□□ -0.61
CAPN3-219ENST00000569136 DLK2Q6UY11 383 aa11.22□□□□□ -0.61
CAPN3-219ENST00000569136 FAM83AQ86UY5 434 aa11.22□□□□□ -0.61
CAPN3-219ENST00000569136 ZNF511Q8NB15 262 aa11.22□□□□□ -0.61
CAPN3-219ENST00000569136 EAF2Q96CJ1 260 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-219ENST00000569136 DBNDD2Q9BQY9 259 aa11.22□□□□□ -0.61
CAPN3-219ENST00000569136 TDRD3Q9H7E2 651 aaKnown RBP11.22□□□□□ -0.61
CAPN3-219ENST00000569136 HMG20BQ9P0W2 317 aa11.22□□□□□ -0.61
CAPN3-219ENST00000569136 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-219ENST00000569136 V9GY48 417 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-219ENST00000569136 IFIT2P09913 472 aaKnown RBP11.21□□□□□ -0.61
CAPN3-219ENST00000569136 PRDX5P30044 214 aa11.21□□□□□ -0.61
CAPN3-219ENST00000569136 ZNF157P51786 506 aaPredicted RBP11.21□□□□□ -0.61
CAPN3-219ENST00000569136 FOXC1Q12948 553 aa11.21□□□□□ -0.61
CAPN3-219ENST00000569136 PRAMEF18Q5VWM3 479 aa11.21□□□□□ -0.61
CAPN3-219ENST00000569136 AACSQ86V21 672 aa11.21□□□□□ -0.61
CAPN3-219ENST00000569136 DZIP1Q86YF9 867 aaKnown RBP11.21□□□□□ -0.61
CAPN3-219ENST00000569136 CCDC8Q9H0W5 538 aaPredicted RBP11.21□□□□□ -0.61
CAPN3-219ENST00000569136 DCTPP1Q9H773 170 aa11.21□□□□□ -0.61
CAPN3-219ENST00000569136 LRP2BPQ9P2M1 347 aa11.21□□□□□ -0.61
CAPN3-219ENST00000569136 PCDHAC2Q9Y5I4 1007 aa11.21□□□□□ -0.61
CAPN3-219ENST00000569136 SCN9AQ15858 1988 aa11.21□□□□□ -0.62
CAPN3-219ENST00000569136 MAGEB6P1A0A0J9YX57 407 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms