RNA–Protein interactions for RNA: ENST00000569035.5

NEIL1-221, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL1, Length 1,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-221ENST00000569035 NTRK3Q16288 839 aa20.47■□□□□ 0.87
NEIL1-221ENST00000569035 RTN1Q16799 776 aa20.47■□□□□ 0.87
NEIL1-221ENST00000569035 CCDC178Q5BJE1 867 aa20.47■□□□□ 0.87
NEIL1-221ENST00000569035 LINC00301Q8NCQ3 95 aa20.47■□□□□ 0.87
NEIL1-221ENST00000569035 MRPS27Q92552 414 aaKnown RBP20.47■□□□□ 0.87
NEIL1-221ENST00000569035 RBM28Q9NW13 759 aaKnown RBP20.47■□□□□ 0.87
NEIL1-221ENST00000569035 FAM205AQ6ZU69 1335 aa20.47■□□□□ 0.87
NEIL1-221ENST00000569035 NFKBIEO00221 500 aa20.46■□□□□ 0.87
NEIL1-221ENST00000569035 PRKAB2O43741 272 aa20.46■□□□□ 0.87
NEIL1-221ENST00000569035 DEXIO95424 95 aa20.46■□□□□ 0.87
NEIL1-221ENST00000569035 MFSD14BQ5SR56 506 aa20.46■□□□□ 0.87
NEIL1-221ENST00000569035 LARGE2Q8N3Y3 721 aa20.46■□□□□ 0.87
NEIL1-221ENST00000569035 RRAGDQ9NQL2 400 aaPredicted RBP20.46■□□□□ 0.87
NEIL1-221ENST00000569035 USP25Q9UHP3 1055 aa20.46■□□□□ 0.87
NEIL1-221ENST00000569035 ORC4O43929 436 aa20.46■□□□□ 0.87
NEIL1-221ENST00000569035 PPP6R2O75170 966 aa20.46■□□□□ 0.87
NEIL1-221ENST00000569035 LDHBP07195 334 aaKnown RBP20.46■□□□□ 0.87
NEIL1-221ENST00000569035 ADGRA1Q86SQ6 560 aa20.46■□□□□ 0.87
NEIL1-221ENST00000569035 MXD3Q9BW11 206 aa20.46■□□□□ 0.87
NEIL1-221ENST00000569035 TAOK3Q9H2K8 898 aa20.46■□□□□ 0.87
NEIL1-221ENST00000569035 RTN4Q9NQC3 1192 aaKnown RBP20.46■□□□□ 0.87
NEIL1-221ENST00000569035 GOLGA6L6A8MZA4 724 aa20.45■□□□□ 0.86
NEIL1-221ENST00000569035 SPTLC2O15270 562 aa20.45■□□□□ 0.86
NEIL1-221ENST00000569035 DTNBO60941 627 aa20.45■□□□□ 0.86
NEIL1-221ENST00000569035 NR1I2O75469 434 aa20.45■□□□□ 0.86
NEIL1-221ENST00000569035 U2AF2P26368 475 aaKnown RBP eCLIP20.45■□□□□ 0.86
NEIL1-221ENST00000569035 KRT40Q6A162 431 aa20.45■□□□□ 0.86
NEIL1-221ENST00000569035 AMOTL1Q8IY63 956 aa20.45■□□□□ 0.86
NEIL1-221ENST00000569035 NOL10Q9BSC4 688 aaKnown RBP20.45■□□□□ 0.86
NEIL1-221ENST00000569035 BAG3O95817 575 aa20.44■□□□□ 0.86
NEIL1-221ENST00000569035 PTMAP06454 111 aaKnown RBP20.44■□□□□ 0.86
NEIL1-221ENST00000569035 GUCY1B3Q02153 619 aa20.44■□□□□ 0.86
NEIL1-221ENST00000569035 PDE4BQ07343 736 aa20.44■□□□□ 0.86
NEIL1-221ENST00000569035 RRP12Q5JTH9 1297 aaKnown RBP20.44■□□□□ 0.86
NEIL1-221ENST00000569035 ANO1Q5XXA6 986 aa20.44■□□□□ 0.86
NEIL1-221ENST00000569035 TBC1D22AQ8WUA7 517 aa20.44■□□□□ 0.86
NEIL1-221ENST00000569035 RNF26Q9BY78 433 aaPredicted RBP20.44■□□□□ 0.86
NEIL1-221ENST00000569035 YDJCA8MPS7 323 aa20.44■□□□□ 0.86
NEIL1-221ENST00000569035 MINDY4BA8MYZ0 360 aa20.44■□□□□ 0.86
NEIL1-221ENST00000569035 DDAH1O94760 285 aa20.44■□□□□ 0.86
NEIL1-221ENST00000569035 CDC27P30260 824 aa20.44■□□□□ 0.86
NEIL1-221ENST00000569035 DZIP1Q86YF9 867 aaKnown RBP20.44■□□□□ 0.86
NEIL1-221ENST00000569035 SLF2Q8IX21 1173 aa20.44■□□□□ 0.86
NEIL1-221ENST00000569035 ZNF654Q8IZM8 581 aa20.44■□□□□ 0.86
NEIL1-221ENST00000569035 CERS5Q8N5B7 392 aa20.44■□□□□ 0.86
NEIL1-221ENST00000569035 FANCBQ8NB91 859 aa20.44■□□□□ 0.86
NEIL1-221ENST00000569035 ZKSCAN5Q9Y2L8 839 aa20.44■□□□□ 0.86
NEIL1-221ENST00000569035 ECM29Q5VYK3 1845 aa20.43■□□□□ 0.86
NEIL1-221ENST00000569035 AKAP17AQ02040 695 aaKnown RBP20.43■□□□□ 0.86
NEIL1-221ENST00000569035 SLC39A14Q15043 492 aa20.43■□□□□ 0.86
NEIL1-221ENST00000569035 CATIPQ7Z7H3 387 aa20.43■□□□□ 0.86
NEIL1-221ENST00000569035 ENGASEQ8NFI3 743 aa20.43■□□□□ 0.86
NEIL1-221ENST00000569035 ZSCAN10Q96SZ4 725 aaPredicted RBP20.43■□□□□ 0.86
NEIL1-221ENST00000569035 VPS33BQ9H267 617 aa20.43■□□□□ 0.86
NEIL1-221ENST00000569035 FOXP1Q9H334 677 aaPredicted RBP20.43■□□□□ 0.86
NEIL1-221ENST00000569035 FAM217BQ9NTX9 383 aaPredicted RBP20.43■□□□□ 0.86
NEIL1-221ENST00000569035 FOSBP53539 338 aa20.42■□□□□ 0.86
NEIL1-221ENST00000569035 RASSF7Q02833 373 aa20.42■□□□□ 0.86
NEIL1-221ENST00000569035 SEC23AQ15436 765 aa20.42■□□□□ 0.86
NEIL1-221ENST00000569035 STX1AQ16623 288 aa20.42■□□□□ 0.86
NEIL1-221ENST00000569035 STRIP1Q5VSL9 837 aa20.42■□□□□ 0.86
NEIL1-221ENST00000569035 FSIP1Q8NA03 581 aa20.42■□□□□ 0.86
NEIL1-221ENST00000569035 SDR42E1Q8WUS8 393 aa20.42■□□□□ 0.86
NEIL1-221ENST00000569035 TIGD1Q96MW7 591 aa20.42■□□□□ 0.86
NEIL1-221ENST00000569035 NAT10Q9H0A0 1025 aaKnown RBP20.42■□□□□ 0.86
NEIL1-221ENST00000569035 PCDHA7Q9UN72 937 aa20.42■□□□□ 0.86
NEIL1-221ENST00000569035 MRVI1Q9Y6F6 885 aa20.42■□□□□ 0.86
NEIL1-221ENST00000569035 MORC2Q9Y6X9 1032 aaPredicted RBP20.42■□□□□ 0.86
NEIL1-221ENST00000569035 TNKSO95271 1327 aa20.42■□□□□ 0.86
NEIL1-221ENST00000569035 USP17L3A6NCW0 530 aa20.41■□□□□ 0.86
NEIL1-221ENST00000569035 USP17L4A6NCW7 530 aa20.41■□□□□ 0.86
NEIL1-221ENST00000569035 ZNF500O60304 480 aaPredicted RBP20.41■□□□□ 0.86
NEIL1-221ENST00000569035 CMA1P23946 247 aa20.41■□□□□ 0.86
NEIL1-221ENST00000569035 CEBPZQ03701 1054 aaKnown RBP20.41■□□□□ 0.86
NEIL1-221ENST00000569035 DIXDC1Q155Q3 683 aa20.41■□□□□ 0.86
NEIL1-221ENST00000569035 TPRNQ4KMQ1 711 aa20.41■□□□□ 0.86
NEIL1-221ENST00000569035 USP17L1Q7RTZ2 530 aa20.41■□□□□ 0.86
NEIL1-221ENST00000569035 SLC26A6Q9BXS9 759 aa20.41■□□□□ 0.86
NEIL1-221ENST00000569035 ZNF287Q9HBT7 754 aa20.41■□□□□ 0.86
NEIL1-221ENST00000569035 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.41■□□□□ 0.86
NEIL1-221ENST00000569035 ANO10Q9NW15 660 aa20.41■□□□□ 0.86
NEIL1-221ENST00000569035 BRCA1P38398 1863 aaKnown RBP20.41■□□□□ 0.86
NEIL1-221ENST00000569035 F8W031 263 aaPredicted RBP20.41■□□□□ 0.86
NEIL1-221ENST00000569035 CAMK4Q16566 473 aa20.41■□□□□ 0.86
NEIL1-221ENST00000569035 DACT2Q5SW24 774 aa20.41■□□□□ 0.86
NEIL1-221ENST00000569035 IFIT1BQ5T764 474 aaKnown RBP20.41■□□□□ 0.86
NEIL1-221ENST00000569035 CTR9Q6PD62 1173 aa20.41■□□□□ 0.86
NEIL1-221ENST00000569035 CRACR2BQ8N4Y2 399 aaPredicted RBP20.41■□□□□ 0.86
NEIL1-221ENST00000569035 CEP131Q9UPN4 1083 aa20.41■□□□□ 0.86
NEIL1-221ENST00000569035 MYH6P13533 1939 aa20.4■□□□□ 0.86
NEIL1-221ENST00000569035 BAZ2AQ9UIF9 1905 aaKnown RBP20.4■□□□□ 0.86
NEIL1-221ENST00000569035 ADCY5O95622 1261 aa20.4■□□□□ 0.86
NEIL1-221ENST00000569035 POLR3DP05423 398 aaPredicted RBP20.4■□□□□ 0.86
NEIL1-221ENST00000569035 PLCG2P16885 1265 aa20.4■□□□□ 0.86
NEIL1-221ENST00000569035 PPP4CP60510 307 aa20.4■□□□□ 0.86
NEIL1-221ENST00000569035 SNW1Q13573 536 aaKnown RBP20.4■□□□□ 0.86
NEIL1-221ENST00000569035 ZRSR1Q15695 479 aaKnown RBP20.4■□□□□ 0.86
NEIL1-221ENST00000569035 RILPL1Q5EBL4 403 aa20.4■□□□□ 0.86
NEIL1-221ENST00000569035 ARHGAP27Q6ZUM4 889 aa20.4■□□□□ 0.86
NEIL1-221ENST00000569035 DCP1AQ9NPI6 582 aaPredicted RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms