RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 IDH3AP50213 366 aa7.59□□□□□ -1.19
CDH13-211ENST00000568770 TNP2Q05952 138 aa7.59□□□□□ -1.19
CDH13-211ENST00000568770 TYRO3Q06418 890 aa7.59□□□□□ -1.19
CDH13-211ENST00000568770 SFSWAPQ12872 951 aaKnown RBP7.59□□□□□ -1.19
CDH13-211ENST00000568770 NFX1Q12986 1120 aaKnown RBP7.59□□□□□ -1.19
CDH13-211ENST00000568770 CCDC93Q567U6 631 aa7.59□□□□□ -1.19
CDH13-211ENST00000568770 OLFM4Q6UX06 510 aa7.59□□□□□ -1.19
CDH13-211ENST00000568770 SV2AQ7L0J3 742 aa7.59□□□□□ -1.19
CDH13-211ENST00000568770 ZNF496Q96IT1 587 aaPredicted RBP7.59□□□□□ -1.19
CDH13-211ENST00000568770 CEP63Q96MT8 703 aa7.59□□□□□ -1.19
CDH13-211ENST00000568770 NUP98P52948 1817 aa7.59□□□□□ -1.19
CDH13-211ENST00000568770 HEG1Q9ULI3 1381 aa7.59□□□□□ -1.2
CDH13-211ENST00000568770 FZD9O00144 591 aa7.58□□□□□ -1.2
CDH13-211ENST00000568770 CAMTA2O94983 1202 aa7.58□□□□□ -1.2
CDH13-211ENST00000568770 A1BGP04217 495 aa7.58□□□□□ -1.2
CDH13-211ENST00000568770 MAPTP10636 758 aaKnown RBP7.58□□□□□ -1.2
CDH13-211ENST00000568770 NPR1P16066 1061 aa7.58□□□□□ -1.2
CDH13-211ENST00000568770 FMR1Q06787 632 aaKnown RBP eCLIP7.58□□□□□ -1.2
CDH13-211ENST00000568770 GRM1Q13255 1194 aa7.58□□□□□ -1.2
CDH13-211ENST00000568770 NOM1Q5C9Z4 860 aaKnown RBP7.58□□□□□ -1.2
CDH13-211ENST00000568770 SAMD5Q5TGI4 173 aa7.58□□□□□ -1.2
CDH13-211ENST00000568770 IER5Q5VY09 327 aa7.58□□□□□ -1.2
CDH13-211ENST00000568770 ZNF790Q6PG37 636 aa7.58□□□□□ -1.2
CDH13-211ENST00000568770 NBPF5PQ86XG9 351 aaPredicted RBP7.58□□□□□ -1.2
CDH13-211ENST00000568770 GLYCTKQ8IVS8 523 aa7.58□□□□□ -1.2
CDH13-211ENST00000568770 GPC2Q8N158 579 aa7.58□□□□□ -1.2
CDH13-211ENST00000568770 GMCL1Q96IK5 515 aa7.58□□□□□ -1.2
CDH13-211ENST00000568770 CAPNS2Q96L46 248 aa7.58□□□□□ -1.2
CDH13-211ENST00000568770 TEX13AQ9BXU3 409 aaPredicted RBP7.58□□□□□ -1.2
CDH13-211ENST00000568770 DDX21Q9NR30 783 aaKnown RBP eCLIP7.58□□□□□ -1.2
CDH13-211ENST00000568770 COL4A5P29400 1685 aa7.57□□□□□ -1.2
CDH13-211ENST00000568770 POLR2AP24928 1970 aaKnown RBP7.57□□□□□ -1.2
CDH13-211ENST00000568770 KHNYNO15037 678 aaKnown RBP7.57□□□□□ -1.2
CDH13-211ENST00000568770 EFSO43281 561 aa7.57□□□□□ -1.2
CDH13-211ENST00000568770 FZD6O60353 706 aa7.57□□□□□ -1.2
CDH13-211ENST00000568770 IARSP41252 1262 aaKnown RBP7.57□□□□□ -1.2
CDH13-211ENST00000568770 ECE1P42892 770 aa7.57□□□□□ -1.2
CDH13-211ENST00000568770 ZAP70P43403 619 aa7.57□□□□□ -1.2
CDH13-211ENST00000568770 GAS6Q14393 721 aa7.57□□□□□ -1.2
CDH13-211ENST00000568770 CYP4F22Q6NT55 531 aa7.57□□□□□ -1.2
CDH13-211ENST00000568770 NPM2Q86SE8 214 aaKnown RBP7.57□□□□□ -1.2
CDH13-211ENST00000568770 NPAS3Q8IXF0 933 aa7.57□□□□□ -1.2
CDH13-211ENST00000568770 GPR101Q96P66 508 aaPredicted RBP7.57□□□□□ -1.2
CDH13-211ENST00000568770 AKAP11Q9UKA4 1901 aa7.56□□□□□ -1.2
CDH13-211ENST00000568770 KLRG2A4D1S0 409 aaPredicted RBP7.56□□□□□ -1.2
CDH13-211ENST00000568770 PATL2C9JE40 543 aaKnown RBP7.56□□□□□ -1.2
CDH13-211ENST00000568770 FAM13AO94988 1023 aa7.56□□□□□ -1.2
CDH13-211ENST00000568770 FAM157BP0CG42 384 aa7.56□□□□□ -1.2
CDH13-211ENST00000568770 PIP4K2AP48426 406 aaPredicted RBP7.56□□□□□ -1.2
CDH13-211ENST00000568770 CTBSQ01459 385 aa7.56□□□□□ -1.2
CDH13-211ENST00000568770 TEFQ10587 303 aa7.56□□□□□ -1.2
CDH13-211ENST00000568770 HIF1AQ16665 826 aa7.56□□□□□ -1.2
CDH13-211ENST00000568770 RNFT1Q5M7Z0 435 aa7.56□□□□□ -1.2
CDH13-211ENST00000568770 CST9Q5W186 159 aa7.56□□□□□ -1.2
CDH13-211ENST00000568770 FIGNL1Q6PIW4 674 aa7.56□□□□□ -1.2
CDH13-211ENST00000568770 RTKN2Q8IZC4 609 aa7.56□□□□□ -1.2
CDH13-211ENST00000568770 SYNE4Q8N205 404 aa7.56□□□□□ -1.2
CDH13-211ENST00000568770 IL17REQ8NFR9 667 aa7.56□□□□□ -1.2
CDH13-211ENST00000568770 GPR152Q8TDT2 470 aa7.56□□□□□ -1.2
CDH13-211ENST00000568770 BRD7Q9NPI1 651 aa7.56□□□□□ -1.2
CDH13-211ENST00000568770 TRAF5O00463 557 aa7.55□□□□□ -1.2
CDH13-211ENST00000568770 C2CD2LO14523 706 aa7.55□□□□□ -1.2
CDH13-211ENST00000568770 AOC2O75106 756 aa7.55□□□□□ -1.2
CDH13-211ENST00000568770 VSIG8P0DPA2 414 aa7.55□□□□□ -1.2
CDH13-211ENST00000568770 CD33P20138 364 aa7.55□□□□□ -1.2
CDH13-211ENST00000568770 KRT76Q01546 638 aa7.55□□□□□ -1.2
CDH13-211ENST00000568770 CLEC4GQ6UXB4 293 aa7.55□□□□□ -1.2
CDH13-211ENST00000568770 RGL4Q8IZJ4 473 aa7.55□□□□□ -1.2
CDH13-211ENST00000568770 JDP2Q8WYK2 163 aa7.55□□□□□ -1.2
CDH13-211ENST00000568770 FMNL2Q96PY5 1086 aa7.55□□□□□ -1.2
CDH13-211ENST00000568770 BIN2Q9UBW5 565 aaPredicted RBP7.55□□□□□ -1.2
CDH13-211ENST00000568770 KNSTRNQ9Y448 316 aa7.55□□□□□ -1.2
CDH13-211ENST00000568770 LAMB4A4D0S4 1761 aa7.55□□□□□ -1.2
CDH13-211ENST00000568770 SNED1Q8TER0 1413 aa7.54□□□□□ -1.2
CDH13-211ENST00000568770 FAM177BA6PVY3 158 aa7.54□□□□□ -1.2
CDH13-211ENST00000568770 GNAT3A8MTJ3 354 aa7.54□□□□□ -1.2
CDH13-211ENST00000568770 KCNQ3O43525 872 aa7.54□□□□□ -1.2
CDH13-211ENST00000568770 DIAPH1O60610 1272 aaKnown RBP7.54□□□□□ -1.2
CDH13-211ENST00000568770 ALDH1B1P30837 517 aa7.54□□□□□ -1.2
CDH13-211ENST00000568770 MAP2K2P36507 400 aa7.54□□□□□ -1.2
CDH13-211ENST00000568770 EPS15P42566 896 aa7.54□□□□□ -1.2
CDH13-211ENST00000568770 DNM1Q05193 864 aaKnown RBP7.54□□□□□ -1.2
CDH13-211ENST00000568770 TPTE2Q6XPS3 522 aa7.54□□□□□ -1.2
CDH13-211ENST00000568770 EDEM1Q92611 657 aa7.54□□□□□ -1.2
CDH13-211ENST00000568770 PSMD1Q99460 953 aa7.54□□□□□ -1.2
CDH13-211ENST00000568770 CFHR5Q9BXR6 569 aa7.54□□□□□ -1.2
CDH13-211ENST00000568770 MCOLN1Q9GZU1 580 aa7.54□□□□□ -1.2
CDH13-211ENST00000568770 ATXN7L1Q9ULK2 861 aaPredicted RBP7.54□□□□□ -1.2
CDH13-211ENST00000568770 NIP7Q9Y221 180 aaKnown RBP eCLIP7.54□□□□□ -1.2
CDH13-211ENST00000568770 ZNF652Q9Y2D9 606 aa7.54□□□□□ -1.2
CDH13-211ENST00000568770 USP16Q9Y5T5 823 aa7.54□□□□□ -1.2
CDH13-211ENST00000568770 KCNMB2Q9Y691 235 aa7.54□□□□□ -1.2
CDH13-211ENST00000568770 PRAMEF22A3QJZ6 481 aa7.53□□□□□ -1.2
CDH13-211ENST00000568770 BTBD11A6QL63 1104 aa7.53□□□□□ -1.2
CDH13-211ENST00000568770 CA12O43570 354 aa7.53□□□□□ -1.2
CDH13-211ENST00000568770 FGFR3P22607 806 aa7.53□□□□□ -1.2
CDH13-211ENST00000568770 ARSDP51689 593 aa7.53□□□□□ -1.2
CDH13-211ENST00000568770 EIF6P56537 245 aaKnown RBP7.53□□□□□ -1.2
CDH13-211ENST00000568770 TRIP4Q15650 581 aaPredicted RBP7.53□□□□□ -1.2
CDH13-211ENST00000568770 LCE2AQ5TA79 106 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms