RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-223ENST00000568499 ORC4O43929 436 aa17.63■□□□□ 0.41
KLHDC4-223ENST00000568499 RANBP6O60518 1105 aaKnown RBP17.63■□□□□ 0.41
KLHDC4-223ENST00000568499 TSPY3P0CV98 308 aa17.63■□□□□ 0.41
KLHDC4-223ENST00000568499 TSPY8P0CW00 308 aa17.63■□□□□ 0.41
KLHDC4-223ENST00000568499 HSPA6P17066 643 aa17.63■□□□□ 0.41
KLHDC4-223ENST00000568499 ZNF157P51786 506 aaPredicted RBP17.63■□□□□ 0.41
KLHDC4-223ENST00000568499 EVX2Q03828 476 aa17.63■□□□□ 0.41
KLHDC4-223ENST00000568499 NECTIN1Q15223 517 aa17.63■□□□□ 0.41
KLHDC4-223ENST00000568499 C8orf34Q49A92 452 aa17.63■□□□□ 0.41
KLHDC4-223ENST00000568499 RRP12Q5JTH9 1297 aaKnown RBP17.63■□□□□ 0.41
KLHDC4-223ENST00000568499 PPP4R3BQ5MIZ7 849 aa17.63■□□□□ 0.41
KLHDC4-223ENST00000568499 CREB3L3Q68CJ9 461 aa17.63■□□□□ 0.41
KLHDC4-223ENST00000568499 RGMBQ6NW40 437 aa17.63■□□□□ 0.41
KLHDC4-223ENST00000568499 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.63■□□□□ 0.41
KLHDC4-223ENST00000568499 PAXIP1Q6ZW49 1069 aaPredicted RBP17.63■□□□□ 0.41
KLHDC4-223ENST00000568499 ESR2Q92731 530 aa17.63■□□□□ 0.41
KLHDC4-223ENST00000568499 CCDC102AQ96A19 550 aa17.63■□□□□ 0.41
KLHDC4-223ENST00000568499 AS3MTQ9HBK9 375 aa17.63■□□□□ 0.41
KLHDC4-223ENST00000568499 TSPY2A6NKD2 308 aa17.62■□□□□ 0.41
KLHDC4-223ENST00000568499 SLC27A2O14975 620 aa17.62■□□□□ 0.41
KLHDC4-223ENST00000568499 PRDM1O75626 825 aa17.62■□□□□ 0.41
KLHDC4-223ENST00000568499 GDF11O95390 407 aa17.62■□□□□ 0.41
KLHDC4-223ENST00000568499 CYP21A2P08686 494 aa17.62■□□□□ 0.41
KLHDC4-223ENST00000568499 FGRP09769 529 aa17.62■□□□□ 0.41
KLHDC4-223ENST00000568499 SLURP2P0DP57 97 aa17.62■□□□□ 0.41
KLHDC4-223ENST00000568499 KRT32Q14532 448 aa17.62■□□□□ 0.41
KLHDC4-223ENST00000568499 DEFB115Q30KQ5 88 aa17.62■□□□□ 0.41
KLHDC4-223ENST00000568499 TMEM179Q6ZVK1 233 aa17.62■□□□□ 0.41
KLHDC4-223ENST00000568499 RALYLQ86SE5 291 aaKnown RBP17.62■□□□□ 0.41
KLHDC4-223ENST00000568499 ERO1BQ86YB8 467 aa17.62■□□□□ 0.41
KLHDC4-223ENST00000568499 USP26Q9BXU7 913 aa17.62■□□□□ 0.41
KLHDC4-223ENST00000568499 ELP3Q9H9T3 547 aa17.62■□□□□ 0.41
KLHDC4-223ENST00000568499 USP17L5A8MUK1 530 aa17.61■□□□□ 0.41
KLHDC4-223ENST00000568499 SMIM22K7EJ46 135 aa17.61■□□□□ 0.41
KLHDC4-223ENST00000568499 GH2P01242 217 aa17.61■□□□□ 0.41
KLHDC4-223ENST00000568499 RASA1P20936 1047 aa17.61■□□□□ 0.41
KLHDC4-223ENST00000568499 ECE1P42892 770 aa17.61■□□□□ 0.41
KLHDC4-223ENST00000568499 TFAP4Q01664 338 aa17.61■□□□□ 0.41
KLHDC4-223ENST00000568499 RAB3GAP1Q15042 981 aa17.61■□□□□ 0.41
KLHDC4-223ENST00000568499 TBC1D10CQ8IV04 446 aa17.61■□□□□ 0.41
KLHDC4-223ENST00000568499 ZBTB21Q9ULJ3 1066 aa17.61■□□□□ 0.41
KLHDC4-223ENST00000568499 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.61■□□□□ 0.416e-6■■■■■ 34.1
KLHDC4-223ENST00000568499 HSPA4P34932 840 aa17.6■□□□□ 0.41
KLHDC4-223ENST00000568499 PPATQ06203 517 aa17.6■□□□□ 0.41
KLHDC4-223ENST00000568499 CCDC178Q5BJE1 867 aa17.6■□□□□ 0.41
KLHDC4-223ENST00000568499 NCOA7Q8NI08 942 aa17.6■□□□□ 0.41
KLHDC4-223ENST00000568499 CLMNQ96JQ2 1002 aa17.6■□□□□ 0.41
KLHDC4-223ENST00000568499 KANSL2Q9H9L4 492 aa17.6■□□□□ 0.41
KLHDC4-223ENST00000568499 SNCAIPQ9Y6H5 919 aa17.6■□□□□ 0.41
KLHDC4-223ENST00000568499 LAMB1P07942 1786 aa17.59■□□□□ 0.41
KLHDC4-223ENST00000568499 SPDYE5A6NIY4 337 aa17.59■□□□□ 0.41
KLHDC4-223ENST00000568499 RASSF10A6NK89 507 aa17.59■□□□□ 0.41
KLHDC4-223ENST00000568499 E7EWF7 191 aa17.59■□□□□ 0.41
KLHDC4-223ENST00000568499 AKR1B1P15121 316 aa17.59■□□□□ 0.41
KLHDC4-223ENST00000568499 PTPRAP18433 802 aa17.59■□□□□ 0.41
KLHDC4-223ENST00000568499 IQCA1Q86XH1 822 aa17.59■□□□□ 0.41
KLHDC4-223ENST00000568499 NEDD1Q8NHV4 660 aa17.59■□□□□ 0.41
KLHDC4-223ENST00000568499 OPTNQ96CV9 577 aa17.59■□□□□ 0.41
KLHDC4-223ENST00000568499 NBPF3Q9H094 633 aa17.59■□□□□ 0.41
KLHDC4-223ENST00000568499 ZHX2Q9Y6X8 837 aa17.59■□□□□ 0.41
KLHDC4-223ENST00000568499 ZBTB48P10074 688 aaPredicted RBP17.58■□□□□ 0.4
KLHDC4-223ENST00000568499 PPIL2Q13356 520 aa17.58■□□□□ 0.4
KLHDC4-223ENST00000568499 RRP1BQ14684 758 aaKnown RBP17.58■□□□□ 0.4
KLHDC4-223ENST00000568499 TSGA10IPQ3SY00 556 aa17.58■□□□□ 0.4
KLHDC4-223ENST00000568499 FAM47AQ5JRC9 791 aa17.58■□□□□ 0.4
KLHDC4-223ENST00000568499 OTUD5Q96G74 571 aa17.58■□□□□ 0.4
KLHDC4-223ENST00000568499 SH2D4AQ9H788 454 aa17.58■□□□□ 0.4
KLHDC4-223ENST00000568499 ARHGEF10LQ9HCE6 1279 aa17.58■□□□□ 0.4
KLHDC4-223ENST00000568499 INCENPQ9NQS7 918 aa17.58■□□□□ 0.4
KLHDC4-223ENST00000568499 SIPA1L1O43166 1804 aa17.57■□□□□ 0.4
KLHDC4-223ENST00000568499 B4E1Z4 1266 aa17.57■□□□□ 0.4
KLHDC4-223ENST00000568499 KDM4AO75164 1064 aa17.57■□□□□ 0.4
KLHDC4-223ENST00000568499 HMGB1P09429 215 aaKnown RBP17.57■□□□□ 0.4
KLHDC4-223ENST00000568499 PSMA5P28066 241 aa17.57■□□□□ 0.4
KLHDC4-223ENST00000568499 ICA1Q05084 483 aa17.57■□□□□ 0.4
KLHDC4-223ENST00000568499 SEPT2Q15019 361 aa17.57■□□□□ 0.4
KLHDC4-223ENST00000568499 SART3Q15020 963 aaKnown RBP17.57■□□□□ 0.4
KLHDC4-223ENST00000568499 ZNF280CQ8ND82 737 aa17.57■□□□□ 0.4
KLHDC4-223ENST00000568499 WNK4Q96J92 1243 aa17.57■□□□□ 0.4
KLHDC4-223ENST00000568499 UBAC1Q9BSL1 405 aa17.57■□□□□ 0.4
KLHDC4-223ENST00000568499 NEDD4P46934 1319 aa17.56■□□□□ 0.4
KLHDC4-223ENST00000568499 ERICH2A1L162 156 aa17.56■□□□□ 0.4
KLHDC4-223ENST00000568499 SLC10A3P09131 477 aa17.56■□□□□ 0.4
KLHDC4-223ENST00000568499 GTF2A2P52657 109 aa17.56■□□□□ 0.4
KLHDC4-223ENST00000568499 ATP2B2Q01814 1243 aa17.56■□□□□ 0.4
KLHDC4-223ENST00000568499 GRM1Q13255 1194 aa17.56■□□□□ 0.4
KLHDC4-223ENST00000568499 SPRYD7Q5W111 196 aa17.56■□□□□ 0.4
KLHDC4-223ENST00000568499 RASAL3Q86YV0 1011 aa17.56■□□□□ 0.4
KLHDC4-223ENST00000568499 KCNB2Q92953 911 aa17.56■□□□□ 0.4
KLHDC4-223ENST00000568499 NEK1Q96PY6 1258 aa17.56■□□□□ 0.4
KLHDC4-223ENST00000568499 FEZ1Q99689 392 aa17.56■□□□□ 0.4
KLHDC4-223ENST00000568499 WDR18Q9BV38 432 aa17.56■□□□□ 0.4
KLHDC4-223ENST00000568499 TCP11L1Q9NUJ3 509 aa17.56■□□□□ 0.4
KLHDC4-223ENST00000568499 CXCL11O14625 94 aa17.55■□□□□ 0.4
KLHDC4-223ENST00000568499 SEC24BO95487 1268 aa17.55■□□□□ 0.4
KLHDC4-223ENST00000568499 TTLL1O95922 423 aa17.55■□□□□ 0.4
KLHDC4-223ENST00000568499 MCM5P33992 734 aa17.55■□□□□ 0.4
KLHDC4-223ENST00000568499 USP14P54578 494 aa17.55■□□□□ 0.4
KLHDC4-223ENST00000568499 ANAPC15P60006 121 aa17.55■□□□□ 0.4
KLHDC4-223ENST00000568499 SPP2Q13103 211 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms