RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 PTPRAP18433 802 aa13.27□□□□□ -0.29
LINC01228-201ENST00000567966 LACTBP83111 547 aaPredicted RBP13.27□□□□□ -0.29
LINC01228-201ENST00000567966 ADGRA1Q86SQ6 560 aa13.27□□□□□ -0.29
LINC01228-201ENST00000567966 ARMC5Q96C12 935 aa13.27□□□□□ -0.29
LINC01228-201ENST00000567966 RIOK1Q9BRS2 568 aaKnown RBP13.27□□□□□ -0.29
LINC01228-201ENST00000567966 DHX36Q9H2U1 1008 aaKnown RBP13.27□□□□□ -0.29
LINC01228-201ENST00000567966 AATFQ9NY61 560 aaKnown RBP eCLIP13.27□□□□□ -0.29
LINC01228-201ENST00000567966 ZHX2Q9Y6X8 837 aa13.27□□□□□ -0.29
LINC01228-201ENST00000567966 ADGRA2Q96PE1 1338 aa13.27□□□□□ -0.29
LINC01228-201ENST00000567966 RBBP6Q7Z6E9 1792 aaKnown RBP13.27□□□□□ -0.29
LINC01228-201ENST00000567966 PTPRFP10586 1907 aa13.27□□□□□ -0.29
LINC01228-201ENST00000567966 GNAT2P19087 354 aa13.26□□□□□ -0.29
LINC01228-201ENST00000567966 ZMYM1Q5SVZ6 1142 aa13.26□□□□□ -0.29
LINC01228-201ENST00000567966 TEX11Q8IYF3 940 aa13.26□□□□□ -0.29
LINC01228-201ENST00000567966 PIP4P2Q8N4L2 257 aa13.26□□□□□ -0.29
LINC01228-201ENST00000567966 SH3RF3Q8TEJ3 882 aaPredicted RBP13.26□□□□□ -0.29
LINC01228-201ENST00000567966 RILPL2Q969X0 211 aa13.26□□□□□ -0.29
LINC01228-201ENST00000567966 CRNKL1Q9BZJ0 848 aaKnown RBP13.26□□□□□ -0.29
LINC01228-201ENST00000567966 HELLSQ9NRZ9 838 aa13.26□□□□□ -0.29
LINC01228-201ENST00000567966 ATP8A2Q9NTI2 1148 aa13.26□□□□□ -0.29
LINC01228-201ENST00000567966 CDK5RAP2Q96SN8 1893 aa13.25□□□□□ -0.29
LINC01228-201ENST00000567966 SIPA1L1O43166 1804 aa13.25□□□□□ -0.29
LINC01228-201ENST00000567966 MAST2Q6P0Q8 1798 aa13.25□□□□□ -0.29
LINC01228-201ENST00000567966 CXCL11O14625 94 aa13.25□□□□□ -0.29
LINC01228-201ENST00000567966 EN2P19622 333 aaPredicted RBP13.25□□□□□ -0.29
LINC01228-201ENST00000567966 SDSP20132 328 aa13.25□□□□□ -0.29
LINC01228-201ENST00000567966 RRP1BQ14684 758 aaKnown RBP13.25□□□□□ -0.29
LINC01228-201ENST00000567966 BMP2KLQ5H9B9 411 aa13.25□□□□□ -0.29
LINC01228-201ENST00000567966 GIMAP6Q6P9H5 292 aa13.25□□□□□ -0.29
LINC01228-201ENST00000567966 MIGA1Q8NAN2 632 aa13.25□□□□□ -0.29
LINC01228-201ENST00000567966 STRBPQ96SI9 672 aaKnown RBP13.25□□□□□ -0.29
LINC01228-201ENST00000567966 OSBPL5Q9H0X9 879 aaPredicted RBP13.25□□□□□ -0.29
LINC01228-201ENST00000567966 PICK1Q9NRD5 415 aa13.25□□□□□ -0.29
LINC01228-201ENST00000567966 AFG3L2Q9Y4W6 797 aa13.25□□□□□ -0.29
LINC01228-201ENST00000567966 ATAD5Q96QE3 1844 aa13.25□□□□□ -0.29
LINC01228-201ENST00000567966 A0A0G2JLL6 359 aaPredicted RBP13.24□□□□□ -0.29
LINC01228-201ENST00000567966 CTNND1O60716 968 aaKnown RBP13.24□□□□□ -0.29
LINC01228-201ENST00000567966 MYCP01106 439 aaPredicted RBP13.24□□□□□ -0.29
LINC01228-201ENST00000567966 CYP2C8P10632 490 aa13.24□□□□□ -0.29
LINC01228-201ENST00000567966 MFAP1P55081 439 aaKnown RBP13.24□□□□□ -0.29
LINC01228-201ENST00000567966 KIF22Q14807 665 aa13.24□□□□□ -0.29
LINC01228-201ENST00000567966 SLC9C1Q4G0N8 1177 aa13.24□□□□□ -0.29
LINC01228-201ENST00000567966 GADL1Q6ZQY3 521 aa13.24□□□□□ -0.29
LINC01228-201ENST00000567966 PRRT2Q7Z6L0 340 aaPredicted RBP13.24□□□□□ -0.29
LINC01228-201ENST00000567966 FOXP4Q8IVH2 680 aaPredicted RBP13.24□□□□□ -0.29
LINC01228-201ENST00000567966 SH3TC2Q8TF17 1288 aa13.24□□□□□ -0.29
LINC01228-201ENST00000567966 OSBP2Q969R2 916 aa13.24□□□□□ -0.29
LINC01228-201ENST00000567966 DDRGK1Q96HY6 314 aa13.24□□□□□ -0.29
LINC01228-201ENST00000567966 ZNF333Q96JL9 665 aa13.24□□□□□ -0.29
LINC01228-201ENST00000567966 TRIM47Q96LD4 638 aa13.24□□□□□ -0.29
LINC01228-201ENST00000567966 PUS7LQ9H0K6 701 aaKnown RBP13.24□□□□□ -0.29
LINC01228-201ENST00000567966 TRIM75PA6NK02 468 aa13.23□□□□□ -0.29
LINC01228-201ENST00000567966 TBC1D12O60347 775 aa13.23□□□□□ -0.29
LINC01228-201ENST00000567966 GSPT1P15170 499 aaKnown RBP13.23□□□□□ -0.29
LINC01228-201ENST00000567966 PSMC4P43686 418 aa13.23□□□□□ -0.29
LINC01228-201ENST00000567966 USP5P45974 858 aa13.23□□□□□ -0.29
LINC01228-201ENST00000567966 DYNLL1P63167 89 aaKnown RBP13.23□□□□□ -0.29
LINC01228-201ENST00000567966 ARHGEF6Q15052 776 aa13.23□□□□□ -0.29
LINC01228-201ENST00000567966 MCMDC2Q4G0Z9 681 aa13.23□□□□□ -0.29
LINC01228-201ENST00000567966 TGFBRAP1Q8WUH2 860 aa13.23□□□□□ -0.29
LINC01228-201ENST00000567966 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.23□□□□□ -0.29
LINC01228-201ENST00000567966 RTN4Q9NQC3 1192 aaKnown RBP13.23□□□□□ -0.29
LINC01228-201ENST00000567966 PI4KBQ9UBF8 816 aa13.23□□□□□ -0.29
LINC01228-201ENST00000567966 MGAMO43451 1857 aa13.23□□□□□ -0.29
LINC01228-201ENST00000567966 FOCADQ5VW36 1801 aa13.23□□□□□ -0.29
LINC01228-201ENST00000567966 PATL2C9JE40 543 aaKnown RBP13.22□□□□□ -0.29
LINC01228-201ENST00000567966 MBD4O95243 580 aa13.22□□□□□ -0.29
LINC01228-201ENST00000567966 BCRP11274 1271 aa13.22□□□□□ -0.29
LINC01228-201ENST00000567966 OSBPP22059 807 aa13.22□□□□□ -0.29
LINC01228-201ENST00000567966 FXR2P51116 673 aaKnown RBP eCLIP13.22□□□□□ -0.29
LINC01228-201ENST00000567966 TTC6Q86TZ1 520 aa13.22□□□□□ -0.29
LINC01228-201ENST00000567966 METTL16Q86W50 562 aaKnown RBP13.22□□□□□ -0.29
LINC01228-201ENST00000567966 RUFY2Q8WXA3 655 aa13.22□□□□□ -0.29
LINC01228-201ENST00000567966 SPOCK2Q92563 424 aa13.22□□□□□ -0.29
LINC01228-201ENST00000567966 DIAPH3Q9NSV4 1193 aa13.22□□□□□ -0.29
LINC01228-201ENST00000567966 COL2A1P02458 1487 aaPredicted RBP13.22□□□□□ -0.29
LINC01228-201ENST00000567966 MKI67P46013 3256 aaKnown RBP13.21□□□□□ -0.29
LINC01228-201ENST00000567966 FLT1P17948 1338 aa13.21□□□□□ -0.29
LINC01228-201ENST00000567966 GPAA1O43292 621 aa13.21□□□□□ -0.29
LINC01228-201ENST00000567966 JAG1P78504 1218 aa13.21□□□□□ -0.29
LINC01228-201ENST00000567966 SHROOM1Q2M3G4 852 aaPredicted RBP13.21□□□□□ -0.29
LINC01228-201ENST00000567966 PRPF38BQ5VTL8 546 aaKnown RBP13.21□□□□□ -0.29
LINC01228-201ENST00000567966 FASTKD5Q7L8L6 764 aaKnown RBP13.21□□□□□ -0.29
LINC01228-201ENST00000567966 MAPKAPK5Q8IW41 473 aa13.21□□□□□ -0.29
LINC01228-201ENST00000567966 LCORLQ8N3X6 602 aa13.21□□□□□ -0.29
LINC01228-201ENST00000567966 PARK7Q99497 189 aaKnown RBP13.21□□□□□ -0.29
LINC01228-201ENST00000567966 NACAP1Q9BZK3 213 aa13.21□□□□□ -0.29
LINC01228-201ENST00000567966 ARMT1Q9H993 441 aa13.21□□□□□ -0.29
LINC01228-201ENST00000567966 DCP1AQ9NPI6 582 aaPredicted RBP13.21□□□□□ -0.29
LINC01228-201ENST00000567966 SRRDQ9UH36 339 aa13.21□□□□□ -0.29
LINC01228-201ENST00000567966 HERC5Q9UII4 1024 aaKnown RBP13.21□□□□□ -0.29
LINC01228-201ENST00000567966 BRCA2P51587 3418 aa13.2□□□□□ -0.3
LINC01228-201ENST00000567966 SLC34A2O95436 690 aa13.2□□□□□ -0.3
LINC01228-201ENST00000567966 FMNL1O95466 1100 aaPredicted RBP13.2□□□□□ -0.3
LINC01228-201ENST00000567966 HLA-DOAP06340 250 aa13.2□□□□□ -0.3
LINC01228-201ENST00000567966 CAP2P40123 477 aa13.2□□□□□ -0.3
LINC01228-201ENST00000567966 SPP2Q13103 211 aa13.2□□□□□ -0.3
LINC01228-201ENST00000567966 ALX1Q15699 326 aa13.2□□□□□ -0.3
LINC01228-201ENST00000567966 SLC4A8Q2Y0W8 1093 aa13.2□□□□□ -0.3
LINC01228-201ENST00000567966 TREML2Q5T2D2 321 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms