RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 EYA3Q99504 573 aa17.12■□□□□ 0.33
COMMD4-221ENST00000567935 LRRC2Q9BYS8 371 aa17.12■□□□□ 0.33
COMMD4-221ENST00000567935 GGA3Q9NZ52 723 aa17.12■□□□□ 0.33
COMMD4-221ENST00000567935 POLLQ9UGP5 575 aa17.12■□□□□ 0.33
COMMD4-221ENST00000567935 MTMR6Q9Y217 621 aa17.12■□□□□ 0.33
COMMD4-221ENST00000567935 RBBP6Q7Z6E9 1792 aaKnown RBP17.12■□□□□ 0.33
COMMD4-221ENST00000567935 SH2B2O14492 632 aaPredicted RBP17.11■□□□□ 0.33
COMMD4-221ENST00000567935 PRKAB2O43741 272 aa17.11■□□□□ 0.33
COMMD4-221ENST00000567935 FKTNO75072 461 aa17.11■□□□□ 0.33
COMMD4-221ENST00000567935 SLC3A2P08195 630 aaKnown RBP17.11■□□□□ 0.33
COMMD4-221ENST00000567935 EN2P19622 333 aaPredicted RBP17.11■□□□□ 0.33
COMMD4-221ENST00000567935 RCAN1P53805 252 aa17.11■□□□□ 0.33
COMMD4-221ENST00000567935 PPARAQ07869 468 aa17.11■□□□□ 0.33
COMMD4-221ENST00000567935 STK3Q13188 491 aa17.11■□□□□ 0.33
COMMD4-221ENST00000567935 SGMS1Q86VZ5 419 aa17.11■□□□□ 0.33
COMMD4-221ENST00000567935 TMTC2Q8N394 836 aa17.11■□□□□ 0.33
COMMD4-221ENST00000567935 FAM184AQ8NB25 1140 aa17.11■□□□□ 0.33
COMMD4-221ENST00000567935 ZNF384Q8TF68 577 aa17.11■□□□□ 0.33
COMMD4-221ENST00000567935 ARPP21Q9UBL0 812 aaPredicted RBP17.11■□□□□ 0.33
COMMD4-221ENST00000567935 TRIOBPQ9H2D6 2365 aa17.11■□□□□ 0.33
COMMD4-221ENST00000567935 PLCG2P16885 1265 aa17.1■□□□□ 0.33
COMMD4-221ENST00000567935 KLHL40Q2TBA0 621 aa17.1■□□□□ 0.33
COMMD4-221ENST00000567935 SBK1Q52WX2 424 aa17.1■□□□□ 0.33
COMMD4-221ENST00000567935 MOB2Q70IA6 237 aa17.1■□□□□ 0.33
COMMD4-221ENST00000567935 SULF1Q8IWU6 871 aa17.1■□□□□ 0.33
COMMD4-221ENST00000567935 NSUN7Q8NE18 718 aaKnown RBP17.1■□□□□ 0.33
COMMD4-221ENST00000567935 FAM163AQ96GL9 167 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-221ENST00000567935 ZC3H12CQ9C0D7 883 aaKnown RBP17.1■□□□□ 0.33
COMMD4-221ENST00000567935 KLF18A0A0U1RQI7 1052 aa17.09■□□□□ 0.33
COMMD4-221ENST00000567935 B4E1Z4 1266 aa17.09■□□□□ 0.33
COMMD4-221ENST00000567935 CDKL5O76039 1030 aa17.09■□□□□ 0.33
COMMD4-221ENST00000567935 MBD3O95983 291 aa17.09■□□□□ 0.33
COMMD4-221ENST00000567935 KIF4BQ2VIQ3 1234 aa17.09■□□□□ 0.33
COMMD4-221ENST00000567935 CPLX2Q6PUV4 134 aaKnown RBP17.09■□□□□ 0.33
COMMD4-221ENST00000567935 TMEM87AQ8NBN3 555 aa17.09■□□□□ 0.33
COMMD4-221ENST00000567935 ESR2Q92731 530 aa17.09■□□□□ 0.33
COMMD4-221ENST00000567935 OTUD5Q96G74 571 aa17.09■□□□□ 0.33
COMMD4-221ENST00000567935 LMBRD1Q9NUN5 540 aa17.09■□□□□ 0.33
COMMD4-221ENST00000567935 NEDD4P46934 1319 aa17.09■□□□□ 0.33
COMMD4-221ENST00000567935 LAMB1P07942 1786 aa17.08■□□□□ 0.33
COMMD4-221ENST00000567935 MROH7-TTC4A0A0A0MT08 1334 aa17.08■□□□□ 0.32
COMMD4-221ENST00000567935 ERICH2A1L162 156 aa17.08■□□□□ 0.32
COMMD4-221ENST00000567935 GOLGA8BA8MQT2 603 aa17.08■□□□□ 0.32
COMMD4-221ENST00000567935 FGRP09769 529 aa17.08■□□□□ 0.32
COMMD4-221ENST00000567935 TM4SF4P48230 202 aa17.08■□□□□ 0.32
COMMD4-221ENST00000567935 DYNLL1P63167 89 aaKnown RBP17.08■□□□□ 0.32
COMMD4-221ENST00000567935 CHST3Q7LGC8 479 aa17.08■□□□□ 0.32
COMMD4-221ENST00000567935 AMOTL1Q8IY63 956 aa17.08■□□□□ 0.32
COMMD4-221ENST00000567935 SDR42E1Q8WUS8 393 aa17.08■□□□□ 0.32
COMMD4-221ENST00000567935 ISY1Q9ULR0 285 aaKnown RBP17.08■□□□□ 0.32
COMMD4-221ENST00000567935 NID2Q14112 1375 aa17.07■□□□□ 0.32
COMMD4-221ENST00000567935 KIAA0100Q14667 2235 aaKnown RBP17.07■□□□□ 0.32
COMMD4-221ENST00000567935 PTPDC1A2A3K4 754 aa17.07■□□□□ 0.32
COMMD4-221ENST00000567935 VPS37CA5D8V6 355 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-221ENST00000567935 CTDSPL2Q05D32 466 aa17.07■□□□□ 0.32
COMMD4-221ENST00000567935 PPP2R5BQ15173 497 aa17.07■□□□□ 0.32
COMMD4-221ENST00000567935 TMEM67Q5HYA8 995 aa17.07■□□□□ 0.32
COMMD4-221ENST00000567935 SYNE3Q6ZMZ3 975 aa17.07■□□□□ 0.32
COMMD4-221ENST00000567935 CYB5R4Q7L1T6 521 aa17.07■□□□□ 0.32
COMMD4-221ENST00000567935 IGDCC4Q8TDY8 1250 aa17.07■□□□□ 0.32
COMMD4-221ENST00000567935 DCP1AQ9NPI6 582 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-221ENST00000567935 AATFQ9NY61 560 aaKnown RBP eCLIP17.07■□□□□ 0.32
COMMD4-221ENST00000567935 ZSWIM5Q9P217 1185 aa17.07■□□□□ 0.32
COMMD4-221ENST00000567935 NAP1L2Q9ULW6 460 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-221ENST00000567935 TRIM17Q9Y577 477 aa17.07■□□□□ 0.32
COMMD4-221ENST00000567935 DDX49Q9Y6V7 483 aaKnown RBP17.07■□□□□ 0.32
COMMD4-221ENST00000567935 MYH2Q9UKX2 1941 aa17.07■□□□□ 0.32
COMMD4-221ENST00000567935 A0A0C4DFX4 3053 aa17.07■□□□□ 0.32
COMMD4-221ENST00000567935 COL6A3P12111 3177 aa17.06■□□□□ 0.32
COMMD4-221ENST00000567935 MINDY4BA8MYZ0 360 aa17.06■□□□□ 0.32
COMMD4-221ENST00000567935 CPLX1O14810 134 aa17.06■□□□□ 0.32
COMMD4-221ENST00000567935 IFIT3O14879 490 aaKnown RBP17.06■□□□□ 0.32
COMMD4-221ENST00000567935 ORC4O43929 436 aa17.06■□□□□ 0.32
COMMD4-221ENST00000567935 KDM4AO75164 1064 aa17.06■□□□□ 0.32
COMMD4-221ENST00000567935 NCLP19338 710 aaKnown RBP17.06■□□□□ 0.32
COMMD4-221ENST00000567935 FKBP1BP68106 108 aa17.06■□□□□ 0.32
COMMD4-221ENST00000567935 MKRN3Q13064 507 aaKnown RBP17.06■□□□□ 0.32
COMMD4-221ENST00000567935 FOXD4L5Q5VV16 416 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-221ENST00000567935 CTR9Q6PD62 1173 aa17.06■□□□□ 0.32
COMMD4-221ENST00000567935 OTOP1Q7RTM1 612 aa17.06■□□□□ 0.32
COMMD4-221ENST00000567935 FOXD4L4Q8WXT5 416 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-221ENST00000567935 ZSCAN16Q9H4T2 348 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-221ENST00000567935 DBNDD1Q9H9R9 158 aa17.06■□□□□ 0.32
COMMD4-221ENST00000567935 KCNQ5Q9NR82 932 aa17.06■□□□□ 0.32
COMMD4-221ENST00000567935 BRPF3Q9ULD4 1205 aa17.06■□□□□ 0.32
COMMD4-221ENST00000567935 BAZ2AQ9UIF9 1905 aaKnown RBP17.06■□□□□ 0.32
COMMD4-221ENST00000567935 GAKO14976 1311 aa17.05■□□□□ 0.32
COMMD4-221ENST00000567935 GPR75-ASB3A0A0A6YYF3 556 aa17.05■□□□□ 0.32
COMMD4-221ENST00000567935 CCDC69A6NI79 296 aa17.05■□□□□ 0.32
COMMD4-221ENST00000567935 H0YGN5 161 aa17.05■□□□□ 0.32
COMMD4-221ENST00000567935 UBE2Q2LH0YL09 131 aa17.05■□□□□ 0.32
COMMD4-221ENST00000567935 H3BQV1 296 aa17.05■□□□□ 0.32
COMMD4-221ENST00000567935 ZBTB43O43298 467 aa17.05■□□□□ 0.32
COMMD4-221ENST00000567935 JAK2O60674 1132 aa17.05■□□□□ 0.32
COMMD4-221ENST00000567935 RPS12P25398 132 aaKnown RBP17.05■□□□□ 0.32
COMMD4-221ENST00000567935 FKBP1AP62942 108 aaKnown RBP17.05■□□□□ 0.32
COMMD4-221ENST00000567935 MFSD14BQ5SR56 506 aa17.05■□□□□ 0.32
COMMD4-221ENST00000567935 APOA5Q6Q788 366 aa17.05■□□□□ 0.32
COMMD4-221ENST00000567935 PODNQ7Z5L7 613 aa17.05■□□□□ 0.32
COMMD4-221ENST00000567935 UBAC1Q9BSL1 405 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms