RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 TRPA1O75762 1119 aa15.21■□□□□ 0.03
GINS3-209ENST00000567909 SHMT1P34896 483 aa15.21■□□□□ 0.03
GINS3-209ENST00000567909 TM4SF4P48230 202 aa15.21■□□□□ 0.03
GINS3-209ENST00000567909 JAG1P78504 1218 aa15.21■□□□□ 0.03
GINS3-209ENST00000567909 GABPAQ06546 454 aa15.21■□□□□ 0.03
GINS3-209ENST00000567909 SNAPC2Q13487 334 aa15.21■□□□□ 0.03
GINS3-209ENST00000567909 CCL15Q16663 113 aa15.21■□□□□ 0.03
GINS3-209ENST00000567909 CERKLQ49MI3 558 aaPredicted RBP15.21■□□□□ 0.03
GINS3-209ENST00000567909 VPS53Q5VIR6 699 aa15.21■□□□□ 0.03
GINS3-209ENST00000567909 ZNF589Q86UQ0 364 aaPredicted RBP15.21■□□□□ 0.03
GINS3-209ENST00000567909 MS4A4AQ96JQ5 239 aa15.21■□□□□ 0.03
GINS3-209ENST00000567909 NAPBQ9H115 298 aa15.21■□□□□ 0.03
GINS3-209ENST00000567909 CCDC171Q6TFL3 1326 aa15.2■□□□□ 0.02
GINS3-209ENST00000567909 TRIM75PA6NK02 468 aa15.2■□□□□ 0.02
GINS3-209ENST00000567909 GH2P01242 217 aa15.2■□□□□ 0.02
GINS3-209ENST00000567909 ASNSP08243 561 aa15.2■□□□□ 0.02
GINS3-209ENST00000567909 INHBEP58166 350 aa15.2■□□□□ 0.02
GINS3-209ENST00000567909 SBK1Q52WX2 424 aa15.2■□□□□ 0.02
GINS3-209ENST00000567909 TATDN1Q6P1N9 297 aa15.2■□□□□ 0.02
GINS3-209ENST00000567909 BRI3BPQ8WY22 251 aa15.2■□□□□ 0.02
GINS3-209ENST00000567909 RNF186Q9NXI6 227 aa15.2■□□□□ 0.02
GINS3-209ENST00000567909 ZBTB21Q9ULJ3 1066 aa15.2■□□□□ 0.02
GINS3-209ENST00000567909 CASP8AP2Q9UKL3 1982 aa15.19■□□□□ 0.02
GINS3-209ENST00000567909 USP17L5A8MUK1 530 aa15.19■□□□□ 0.02
GINS3-209ENST00000567909 IGF2BP3O00425 579 aaKnown RBP eCLIP15.19■□□□□ 0.02
GINS3-209ENST00000567909 MPHOSPH10O00566 681 aaKnown RBP15.19■□□□□ 0.02
GINS3-209ENST00000567909 FOXP2O15409 715 aa15.19■□□□□ 0.02
GINS3-209ENST00000567909 CA12O43570 354 aa15.19■□□□□ 0.02
GINS3-209ENST00000567909 CETPP11597 493 aa15.19■□□□□ 0.02
GINS3-209ENST00000567909 CDK8P49336 464 aa15.19■□□□□ 0.02
GINS3-209ENST00000567909 MFAP1P55081 439 aaKnown RBP15.19■□□□□ 0.02
GINS3-209ENST00000567909 ABCB5Q2M3G0 1257 aa15.19■□□□□ 0.02
GINS3-209ENST00000567909 IFNL1Q8IU54 200 aa15.19■□□□□ 0.02
GINS3-209ENST00000567909 SWAP70Q9UH65 585 aa15.19■□□□□ 0.02
GINS3-209ENST00000567909 KCNH4Q9UQ05 1017 aa15.19■□□□□ 0.02
GINS3-209ENST00000567909 AFG3L2Q9Y4W6 797 aa15.19■□□□□ 0.02
GINS3-209ENST00000567909 TESPA1A2RU30 521 aaPredicted RBP15.18■□□□□ 0.02
GINS3-209ENST00000567909 CXCL11O14625 94 aa15.18■□□□□ 0.02
GINS3-209ENST00000567909 HSPD1P10809 573 aaKnown RBP15.18■□□□□ 0.02
GINS3-209ENST00000567909 CTCFP49711 727 aaPredicted RBP15.18■□□□□ 0.02
GINS3-209ENST00000567909 RAB3GAP1Q15042 981 aa15.18■□□□□ 0.02
GINS3-209ENST00000567909 OTUD7BQ6GQQ9 843 aa15.18■□□□□ 0.02
GINS3-209ENST00000567909 C16orf86Q6ZW13 317 aa15.18■□□□□ 0.02
GINS3-209ENST00000567909 PTPN18Q99952 460 aa15.18■□□□□ 0.02
GINS3-209ENST00000567909 CABP5Q9NP86 173 aa15.18■□□□□ 0.02
GINS3-209ENST00000567909 TBC1D8O95759 1140 aa15.17■□□□□ 0.02
GINS3-209ENST00000567909 HSPA8P11142 646 aaKnown RBP15.17■□□□□ 0.02
GINS3-209ENST00000567909 CHMLP26374 656 aa15.17■□□□□ 0.02
GINS3-209ENST00000567909 LBX1P52954 281 aa15.17■□□□□ 0.02
GINS3-209ENST00000567909 SPP2Q13103 211 aa15.17■□□□□ 0.02
GINS3-209ENST00000567909 GADL1Q6ZQY3 521 aa15.17■□□□□ 0.02
GINS3-209ENST00000567909 ZNF280CQ8ND82 737 aa15.17■□□□□ 0.02
GINS3-209ENST00000567909 AS3MTQ9HBK9 375 aa15.17■□□□□ 0.02
GINS3-209ENST00000567909 GINM1Q9NU53 330 aa15.17■□□□□ 0.02
GINS3-209ENST00000567909 SAGE1Q9NXZ1 904 aa15.17■□□□□ 0.02
GINS3-209ENST00000567909 BTBD19C9JJ37 291 aa15.16■□□□□ 0.02
GINS3-209ENST00000567909 ALDH1A1P00352 501 aa15.16■□□□□ 0.02
GINS3-209ENST00000567909 AKR1B1P15121 316 aa15.16■□□□□ 0.02
GINS3-209ENST00000567909 PPARAQ07869 468 aa15.16■□□□□ 0.02
GINS3-209ENST00000567909 SEPT2Q15019 361 aa15.16■□□□□ 0.02
GINS3-209ENST00000567909 FAM43AQ8N2R8 423 aa15.16■□□□□ 0.02
GINS3-209ENST00000567909 RUFY2Q8WXA3 655 aa15.16■□□□□ 0.02
GINS3-209ENST00000567909 TBC1D2Q9BYX2 928 aa15.16■□□□□ 0.02
GINS3-209ENST00000567909 IL25Q9H293 177 aa15.16■□□□□ 0.02
GINS3-209ENST00000567909 MKNK2Q9HBH9 465 aa15.16■□□□□ 0.02
GINS3-209ENST00000567909 TAOK2Q9UL54 1235 aa15.16■□□□□ 0.02
GINS3-209ENST00000567909 ROBO3Q96MS0 1386 aa15.15■□□□□ 0.02
GINS3-209ENST00000567909 A0A0G2JLL6 359 aaPredicted RBP15.15■□□□□ 0.02
GINS3-209ENST00000567909 PRDM1O75626 825 aa15.15■□□□□ 0.02
GINS3-209ENST00000567909 FGAP02671 866 aa15.15■□□□□ 0.02
GINS3-209ENST00000567909 SLC3A2P08195 630 aaKnown RBP15.15■□□□□ 0.02
GINS3-209ENST00000567909 HMGCS2P54868 508 aa15.15■□□□□ 0.02
GINS3-209ENST00000567909 CTDSPL2Q05D32 466 aa15.15■□□□□ 0.02
GINS3-209ENST00000567909 MTMR2Q13614 643 aa15.15■□□□□ 0.02
GINS3-209ENST00000567909 ALX1Q15699 326 aa15.15■□□□□ 0.02
GINS3-209ENST00000567909 BMP2KLQ5H9B9 411 aa15.15■□□□□ 0.02
GINS3-209ENST00000567909 FASTKD5Q7L8L6 764 aaKnown RBP15.15■□□□□ 0.02
GINS3-209ENST00000567909 PRRT2Q7Z6L0 340 aaPredicted RBP15.15■□□□□ 0.02
GINS3-209ENST00000567909 CCDC17Q96LX7 622 aa15.15■□□□□ 0.02
GINS3-209ENST00000567909 FEZ1Q99689 392 aa15.15■□□□□ 0.02
GINS3-209ENST00000567909 WDR18Q9BV38 432 aa15.15■□□□□ 0.02
GINS3-209ENST00000567909 LOC285556D6RIA3 1793 aa15.15■□□□□ 0.02
GINS3-209ENST00000567909 GUCY1A2P33402 732 aa15.14■□□□□ 0.01
GINS3-209ENST00000567909 PDE4BQ07343 736 aa15.14■□□□□ 0.01
GINS3-209ENST00000567909 DGKZQ13574 1117 aa15.14■□□□□ 0.01
GINS3-209ENST00000567909 MOGSQ13724 837 aa15.14■□□□□ 0.01
GINS3-209ENST00000567909 TAF1CQ15572 869 aaPredicted RBP15.14■□□□□ 0.01
GINS3-209ENST00000567909 TMEM179Q6ZVK1 233 aa15.14■□□□□ 0.01
GINS3-209ENST00000567909 R3HDMLQ9H3Y0 253 aa15.14■□□□□ 0.01
GINS3-209ENST00000567909 LAMA4Q16363 1823 aa15.14■□□□□ 0.01
GINS3-209ENST00000567909 RAD50Q92878 1312 aa15.14■□□□□ 0.01
GINS3-209ENST00000567909 MYH4Q9Y623 1939 aa15.13■□□□□ 0.01
GINS3-209ENST00000567909 USP17L10C9JJH3 530 aa15.13■□□□□ 0.01
GINS3-209ENST00000567909 PDHXO00330 501 aa15.13■□□□□ 0.01
GINS3-209ENST00000567909 RASA1P20936 1047 aa15.13■□□□□ 0.01
GINS3-209ENST00000567909 HAND2P61296 217 aa15.13■□□□□ 0.01
GINS3-209ENST00000567909 CRHR2Q13324 411 aa15.13■□□□□ 0.01
GINS3-209ENST00000567909 ZYXQ15942 572 aaKnown RBP15.13■□□□□ 0.01
GINS3-209ENST00000567909 ANKRD23Q86SG2 305 aa15.13■□□□□ 0.01
GINS3-209ENST00000567909 CLEC10AQ8IUN9 316 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms