RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 ZNF646O15015 1829 aaPredicted RBP12.67□□□□□ -0.38
VPS9D1-206ENST00000567379 PSME4Q14997 1843 aa12.67□□□□□ -0.38
VPS9D1-206ENST00000567379 MYO3BQ8WXR4 1341 aa12.66□□□□□ -0.38
VPS9D1-206ENST00000567379 FDPSP14324 419 aaKnown RBP12.66□□□□□ -0.38
VPS9D1-206ENST00000567379 RXRAP19793 462 aa12.66□□□□□ -0.38
VPS9D1-206ENST00000567379 ADD1P35611 737 aaKnown RBP12.66□□□□□ -0.38
VPS9D1-206ENST00000567379 IARSP41252 1262 aaKnown RBP12.66□□□□□ -0.38
VPS9D1-206ENST00000567379 PLCD1P51178 756 aa12.66□□□□□ -0.38
VPS9D1-206ENST00000567379 RBM5P52756 815 aaKnown RBP eCLIP12.66□□□□□ -0.38
VPS9D1-206ENST00000567379 TFAP4Q01664 338 aa12.66□□□□□ -0.38
VPS9D1-206ENST00000567379 SSRP1Q08945 709 aaKnown RBP12.66□□□□□ -0.38
VPS9D1-206ENST00000567379 PICALMQ13492 652 aa12.66□□□□□ -0.38
VPS9D1-206ENST00000567379 SLC4A8Q2Y0W8 1093 aa12.66□□□□□ -0.38
VPS9D1-206ENST00000567379 FAM47AQ5JRC9 791 aa12.66□□□□□ -0.38
VPS9D1-206ENST00000567379 CDC42EP5Q6NZY7 148 aa12.66□□□□□ -0.38
VPS9D1-206ENST00000567379 C16orf86Q6ZW13 317 aa12.66□□□□□ -0.38
VPS9D1-206ENST00000567379 FERMT3Q86UX7 667 aa12.66□□□□□ -0.38
VPS9D1-206ENST00000567379 CCDC144CPQ8IYA2 1237 aa12.66□□□□□ -0.38
VPS9D1-206ENST00000567379 FANCBQ8NB91 859 aa12.66□□□□□ -0.38
VPS9D1-206ENST00000567379 NUP133Q8WUM0 1156 aa12.66□□□□□ -0.38
VPS9D1-206ENST00000567379 KLRG1Q96E93 195 aa12.66□□□□□ -0.38
VPS9D1-206ENST00000567379 DYNLL2Q96FJ2 89 aa12.66□□□□□ -0.38
VPS9D1-206ENST00000567379 C8orf76Q96K31 380 aa12.66□□□□□ -0.38
VPS9D1-206ENST00000567379 MYL10Q9BUA6 226 aa12.66□□□□□ -0.38
VPS9D1-206ENST00000567379 ZNF277Q9NRM2 450 aaPredicted RBP12.66□□□□□ -0.38
VPS9D1-206ENST00000567379 SERPINA10Q9UK55 444 aa12.66□□□□□ -0.38
VPS9D1-206ENST00000567379 STK36Q9NRP7 1315 aa12.65□□□□□ -0.38
VPS9D1-206ENST00000567379 ECM29Q5VYK3 1845 aa12.65□□□□□ -0.38
VPS9D1-206ENST00000567379 TCHHQ07283 1943 aa12.65□□□□□ -0.38
VPS9D1-206ENST00000567379 YDJCA8MPS7 323 aa12.65□□□□□ -0.38
VPS9D1-206ENST00000567379 DDAH1O94760 285 aa12.65□□□□□ -0.38
VPS9D1-206ENST00000567379 MBD3O95983 291 aa12.65□□□□□ -0.38
VPS9D1-206ENST00000567379 TSPY3P0CV98 308 aa12.65□□□□□ -0.38
VPS9D1-206ENST00000567379 TSPY8P0CW00 308 aa12.65□□□□□ -0.38
VPS9D1-206ENST00000567379 IFNAR1P17181 557 aa12.65□□□□□ -0.38
VPS9D1-206ENST00000567379 CDC27P30260 824 aa12.65□□□□□ -0.38
VPS9D1-206ENST00000567379 CDK8P49336 464 aa12.65□□□□□ -0.38
VPS9D1-206ENST00000567379 FOSBP53539 338 aa12.65□□□□□ -0.38
VPS9D1-206ENST00000567379 KRT85P78386 507 aa12.65□□□□□ -0.38
VPS9D1-206ENST00000567379 EVX2Q03828 476 aa12.65□□□□□ -0.38
VPS9D1-206ENST00000567379 KLHL40Q2TBA0 621 aa12.65□□□□□ -0.38
VPS9D1-206ENST00000567379 APOBEC3HQ6NTF7 200 aaKnown RBP12.65□□□□□ -0.38
VPS9D1-206ENST00000567379 NIM1KQ8IY84 436 aa12.65□□□□□ -0.38
VPS9D1-206ENST00000567379 TRIM22Q8IYM9 498 aa12.65□□□□□ -0.38
VPS9D1-206ENST00000567379 TMEM87AQ8NBN3 555 aa12.65□□□□□ -0.38
VPS9D1-206ENST00000567379 WASF1Q92558 559 aa12.65□□□□□ -0.38
VPS9D1-206ENST00000567379 TCP11L1Q9NUJ3 509 aa12.65□□□□□ -0.38
VPS9D1-206ENST00000567379 RBM28Q9NW13 759 aaKnown RBP12.65□□□□□ -0.38
VPS9D1-206ENST00000567379 CNPY2Q9Y2B0 182 aa12.65□□□□□ -0.38
VPS9D1-206ENST00000567379 WDHD1O75717 1129 aaPredicted RBP12.64□□□□□ -0.39
VPS9D1-206ENST00000567379 TOMM70O94826 608 aa12.64□□□□□ -0.39
VPS9D1-206ENST00000567379 FMNL1O95466 1100 aaPredicted RBP12.64□□□□□ -0.39
VPS9D1-206ENST00000567379 HLA-DOAP06340 250 aa12.64□□□□□ -0.39
VPS9D1-206ENST00000567379 DNM1Q05193 864 aaKnown RBP12.64□□□□□ -0.39
VPS9D1-206ENST00000567379 RESTQ13127 1097 aa12.64□□□□□ -0.39
VPS9D1-206ENST00000567379 GSE1Q14687 1217 aa12.64□□□□□ -0.39
VPS9D1-206ENST00000567379 NTRK3Q16288 839 aa12.64□□□□□ -0.39
VPS9D1-206ENST00000567379 RSBN1LQ6PCB5 846 aaPredicted RBP12.64□□□□□ -0.39
VPS9D1-206ENST00000567379 USP48Q86UV5 1035 aa12.64□□□□□ -0.39
VPS9D1-206ENST00000567379 DGKHQ86XP1 1220 aa12.64□□□□□ -0.39
VPS9D1-206ENST00000567379 CHAMP1Q96JM3 812 aa12.64□□□□□ -0.39
VPS9D1-206ENST00000567379 FAM217BQ9NTX9 383 aaPredicted RBP12.64□□□□□ -0.39
VPS9D1-206ENST00000567379 HDAC9Q9UKV0 1011 aa12.64□□□□□ -0.39
VPS9D1-206ENST00000567379 ZNRF3Q9ULT6 936 aa12.64□□□□□ -0.39
VPS9D1-206ENST00000567379 ADAMTSL1Q8N6G6 1762 aa12.64□□□□□ -0.39
VPS9D1-206ENST00000567379 BRCA1P38398 1863 aaKnown RBP12.63□□□□□ -0.39
VPS9D1-206ENST00000567379 PPFIA3O75145 1194 aa12.63□□□□□ -0.39
VPS9D1-206ENST00000567379 VIL1P09327 827 aaKnown RBP12.63□□□□□ -0.39
VPS9D1-206ENST00000567379 RASA1P20936 1047 aa12.63□□□□□ -0.39
VPS9D1-206ENST00000567379 AKAP17AQ02040 695 aaKnown RBP12.63□□□□□ -0.39
VPS9D1-206ENST00000567379 TRIM29Q14134 588 aa12.63□□□□□ -0.39
VPS9D1-206ENST00000567379 FBXO18Q8NFZ0 1043 aa12.63□□□□□ -0.39
VPS9D1-206ENST00000567379 ANKS1AQ92625 1134 aa12.63□□□□□ -0.39
VPS9D1-206ENST00000567379 ALG1Q9BT22 464 aa12.63□□□□□ -0.39
VPS9D1-206ENST00000567379 SLC26A6Q9BXS9 759 aa12.63□□□□□ -0.39
VPS9D1-206ENST00000567379 OSBPL5Q9H0X9 879 aaPredicted RBP12.63□□□□□ -0.39
VPS9D1-206ENST00000567379 TAOK3Q9H2K8 898 aa12.63□□□□□ -0.39
VPS9D1-206ENST00000567379 KAT14Q9H8E8 782 aa12.63□□□□□ -0.39
VPS9D1-206ENST00000567379 SWAP70Q9UH65 585 aa12.63□□□□□ -0.39
VPS9D1-206ENST00000567379 FER1L6Q2WGJ9 1857 aa12.62□□□□□ -0.39
VPS9D1-206ENST00000567379 PSMD14O00487 310 aa12.62□□□□□ -0.39
VPS9D1-206ENST00000567379 FIBPO43427 364 aa12.62□□□□□ -0.39
VPS9D1-206ENST00000567379 NMT2O60551 498 aa12.62□□□□□ -0.39
VPS9D1-206ENST00000567379 NPM3O75607 178 aaKnown RBP12.62□□□□□ -0.39
VPS9D1-206ENST00000567379 RAD17O75943 681 aa12.62□□□□□ -0.39
VPS9D1-206ENST00000567379 KIF5BP33176 963 aa12.62□□□□□ -0.39
VPS9D1-206ENST00000567379 GUCY1B3Q02153 619 aa12.62□□□□□ -0.39
VPS9D1-206ENST00000567379 CFAP100Q494V2 611 aa12.62□□□□□ -0.39
VPS9D1-206ENST00000567379 ATL3Q6DD88 541 aa12.62□□□□□ -0.39
VPS9D1-206ENST00000567379 CRACR2BQ8N4Y2 399 aaPredicted RBP12.62□□□□□ -0.39
VPS9D1-206ENST00000567379 SLC44A5Q8NCS7 719 aa12.62□□□□□ -0.39
VPS9D1-206ENST00000567379 NEDD1Q8NHV4 660 aa12.62□□□□□ -0.39
VPS9D1-206ENST00000567379 CTCFLQ8NI51 663 aaPredicted RBP12.62□□□□□ -0.39
VPS9D1-206ENST00000567379 JDP2Q8WYK2 163 aa12.62□□□□□ -0.39
VPS9D1-206ENST00000567379 PHKBQ93100 1093 aa12.62□□□□□ -0.39
VPS9D1-206ENST00000567379 ZNF396Q96N95 335 aaPredicted RBP12.62□□□□□ -0.39
VPS9D1-206ENST00000567379 IDI2Q9BXS1 227 aa12.62□□□□□ -0.39
VPS9D1-206ENST00000567379 SCAND2PQ9GZW5 306 aaPredicted RBP12.62□□□□□ -0.39
VPS9D1-206ENST00000567379 DHX36Q9H2U1 1008 aaKnown RBP12.62□□□□□ -0.39
VPS9D1-206ENST00000567379 GDPD2Q9HCC8 539 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms