RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 MAP3K11Q16584 847 aa26.94■■□□□ 1.9
LINC00543-201ENST00000567234 SLF2Q8IX21 1173 aa26.94■■□□□ 1.9
LINC00543-201ENST00000567234 SLC26A6Q9BXS9 759 aa26.94■■□□□ 1.9
LINC00543-201ENST00000567234 NAV1Q8NEY1 1877 aa26.94■■□□□ 1.9
LINC00543-201ENST00000567234 CDK5RAP2Q96SN8 1893 aa26.94■■□□□ 1.9
LINC00543-201ENST00000567234 CHRNA5P30532 468 aa26.93■■□□□ 1.9
LINC00543-201ENST00000567234 CEBPZQ03701 1054 aaKnown RBP26.93■■□□□ 1.9
LINC00543-201ENST00000567234 RBM43Q6ZSC3 357 aaKnown RBP26.93■■□□□ 1.9
LINC00543-201ENST00000567234 FAM163AQ96GL9 167 aaPredicted RBP26.93■■□□□ 1.9
LINC00543-201ENST00000567234 CLSTN2Q9H4D0 955 aa26.93■■□□□ 1.9
LINC00543-201ENST00000567234 USP5P45974 858 aa26.93■■□□□ 1.9
LINC00543-201ENST00000567234 IFIT1BQ5T764 474 aaKnown RBP26.93■■□□□ 1.9
LINC00543-201ENST00000567234 NBPF11Q86T75 865 aa26.93■■□□□ 1.9
LINC00543-201ENST00000567234 CRACR2BQ8N4Y2 399 aaPredicted RBP26.93■■□□□ 1.9
LINC00543-201ENST00000567234 KCNG4Q8TDN1 519 aa26.93■■□□□ 1.9
LINC00543-201ENST00000567234 GTPBP4Q9BZE4 634 aaKnown RBP26.93■■□□□ 1.9
LINC00543-201ENST00000567234 MCM9Q9NXL9 1143 aa26.93■■□□□ 1.9
LINC00543-201ENST00000567234 ROBO3Q96MS0 1386 aa26.92■■□□□ 1.9
LINC00543-201ENST00000567234 C6orf229H3BNL8 230 aa26.92■■□□□ 1.9
LINC00543-201ENST00000567234 DEXIO95424 95 aa26.92■■□□□ 1.9
LINC00543-201ENST00000567234 DMTNQ08495 405 aa26.92■■□□□ 1.9
LINC00543-201ENST00000567234 C12orf60Q5U649 245 aa26.92■■□□□ 1.9
LINC00543-201ENST00000567234 CATIPQ7Z7H3 387 aa26.92■■□□□ 1.9
LINC00543-201ENST00000567234 C2CD5Q86YS7 1000 aa26.92■■□□□ 1.9
LINC00543-201ENST00000567234 LINC00301Q8NCQ3 95 aa26.92■■□□□ 1.9
LINC00543-201ENST00000567234 AIFM3Q96NN9 605 aa26.92■■□□□ 1.9
LINC00543-201ENST00000567234 FTOQ9C0B1 505 aaKnown RBP eCLIP26.92■■□□□ 1.9
LINC00543-201ENST00000567234 GJB4Q9NTQ9 266 aa26.92■■□□□ 1.9
LINC00543-201ENST00000567234 DDAH1O94760 285 aa26.91■■□□□ 1.9
LINC00543-201ENST00000567234 POLR3DP05423 398 aaPredicted RBP26.91■■□□□ 1.9
LINC00543-201ENST00000567234 CCDC192P0DO97 292 aa26.91■■□□□ 1.9
LINC00543-201ENST00000567234 U2AF2P26368 475 aaKnown RBP eCLIP26.91■■□□□ 1.9
LINC00543-201ENST00000567234 GRIK5Q16478 980 aa26.91■■□□□ 1.9
LINC00543-201ENST00000567234 AMOTL1Q8IY63 956 aa26.91■■□□□ 1.9
LINC00543-201ENST00000567234 SH3RF3Q8TEJ3 882 aaPredicted RBP26.91■■□□□ 1.9
LINC00543-201ENST00000567234 RTFDC1Q9BY42 306 aaPredicted RBP26.91■■□□□ 1.9
LINC00543-201ENST00000567234 COA1Q9GZY4 146 aa26.91■■□□□ 1.9
LINC00543-201ENST00000567234 TNMDQ9H2S6 317 aa26.91■■□□□ 1.9
LINC00543-201ENST00000567234 RBM28Q9NW13 759 aaKnown RBP26.91■■□□□ 1.9
LINC00543-201ENST00000567234 C10orf71Q711Q0 1435 aa26.91■■□□□ 1.9
LINC00543-201ENST00000567234 GPR75-ASB3A0A0A6YYF3 556 aa26.9■■□□□ 1.9
LINC00543-201ENST00000567234 KIF28PB7ZC32 967 aa26.9■■□□□ 1.9
LINC00543-201ENST00000567234 NR1I2O75469 434 aa26.9■■□□□ 1.9
LINC00543-201ENST00000567234 PLCG2P16885 1265 aa26.9■■□□□ 1.9
LINC00543-201ENST00000567234 DIXDC1Q155Q3 683 aa26.9■■□□□ 1.9
LINC00543-201ENST00000567234 A0A1W2PQ27 194 aa26.9■■□□□ 1.9
LINC00543-201ENST00000567234 A0A1W2PQ64 194 aa26.9■■□□□ 1.9
LINC00543-201ENST00000567234 A0A1W2PQD8 194 aa26.9■■□□□ 1.9
LINC00543-201ENST00000567234 PRDM1O75626 825 aa26.9■■□□□ 1.9
LINC00543-201ENST00000567234 ADALQ6DHV7 355 aa26.9■■□□□ 1.9
LINC00543-201ENST00000567234 OLFM4Q6UX06 510 aa26.9■■□□□ 1.9
LINC00543-201ENST00000567234 RNF214Q8ND24 703 aa26.9■■□□□ 1.9
LINC00543-201ENST00000567234 NUP133Q8WUM0 1156 aa26.9■■□□□ 1.9
LINC00543-201ENST00000567234 ZNF622Q969S3 477 aaKnown RBP eCLIP26.9■■□□□ 1.9
LINC00543-201ENST00000567234 MASTLQ96GX5 879 aa26.9■■□□□ 1.9
LINC00543-201ENST00000567234 RNF26Q9BY78 433 aaPredicted RBP26.9■■□□□ 1.9
LINC00543-201ENST00000567234 SUGT1Q9Y2Z0 365 aa26.9■■□□□ 1.9
LINC00543-201ENST00000567234 ME1P48163 572 aa26.89■■□□□ 1.9
LINC00543-201ENST00000567234 CCAR1Q8IX12 1150 aaKnown RBP26.89■■□□□ 1.9
LINC00543-201ENST00000567234 CYP2D6P10635 497 aa26.88■■□□□ 1.89
LINC00543-201ENST00000567234 STK38Q15208 465 aa26.88■■□□□ 1.89
LINC00543-201ENST00000567234 MFSD14BQ5SR56 506 aa26.88■■□□□ 1.89
LINC00543-201ENST00000567234 MTFR1LQ9H019 292 aa26.88■■□□□ 1.89
LINC00543-201ENST00000567234 CTAGE5O15320 804 aa26.88■■□□□ 1.89
LINC00543-201ENST00000567234 USP17L8P0C7I0 530 aa26.88■■□□□ 1.89
LINC00543-201ENST00000567234 ANO1Q5XXA6 986 aa26.88■■□□□ 1.89
LINC00543-201ENST00000567234 CCDC73Q6ZRK6 1079 aa26.88■■□□□ 1.89
LINC00543-201ENST00000567234 MPNDQ8N594 471 aa26.88■■□□□ 1.89
LINC00543-201ENST00000567234 CLIC4Q9Y696 253 aa26.88■■□□□ 1.89
LINC00543-201ENST00000567234 SLX4Q8IY92 1834 aa26.87■■□□□ 1.89
LINC00543-201ENST00000567234 GAKO14976 1311 aa26.87■■□□□ 1.89
LINC00543-201ENST00000567234 GOLGB1Q14789 3259 aaKnown RBP26.87■■□□□ 1.89
LINC00543-201ENST00000567234 H0YIN7 160 aa26.87■■□□□ 1.89
LINC00543-201ENST00000567234 TROAPQ12815 778 aa26.87■■□□□ 1.89
LINC00543-201ENST00000567234 CCDC178Q5BJE1 867 aa26.87■■□□□ 1.89
LINC00543-201ENST00000567234 PIBF1Q8WXW3 757 aa26.87■■□□□ 1.89
LINC00543-201ENST00000567234 PCDHA7Q9UN72 937 aa26.87■■□□□ 1.89
LINC00543-201ENST00000567234 SPTLC2O15270 562 aa26.86■■□□□ 1.89
LINC00543-201ENST00000567234 GNL2Q13823 731 aaKnown RBP26.86■■□□□ 1.89
LINC00543-201ENST00000567234 SAFBQ15424 915 aaKnown RBP eCLIP26.86■■□□□ 1.89
LINC00543-201ENST00000567234 TMX4Q9H1E5 349 aaPredicted RBP26.86■■□□□ 1.89
LINC00543-201ENST00000567234 DDX60LQ5H9U9 1706 aaKnown RBP26.86■■□□□ 1.89
LINC00543-201ENST00000567234 KIF20AO95235 890 aa26.86■■□□□ 1.89
LINC00543-201ENST00000567234 MMP1P03956 469 aa26.86■■□□□ 1.89
LINC00543-201ENST00000567234 BTDP43251 543 aa26.86■■□□□ 1.89
LINC00543-201ENST00000567234 FAM160A1Q05DH4 1040 aa26.86■■□□□ 1.89
LINC00543-201ENST00000567234 SF3A1Q15459 793 aaKnown RBP26.86■■□□□ 1.89
LINC00543-201ENST00000567234 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.86■■□□□ 1.89
LINC00543-201ENST00000567234 ZC3H12CQ9C0D7 883 aaKnown RBP26.86■■□□□ 1.89
LINC00543-201ENST00000567234 FOCADQ5VW36 1801 aa26.85■■□□□ 1.89
LINC00543-201ENST00000567234 KIF13BQ9NQT8 1826 aa26.85■■□□□ 1.89
LINC00543-201ENST00000567234 TSPY2A6NKD2 308 aa26.85■■□□□ 1.89
LINC00543-201ENST00000567234 ENGASEQ8NFI3 743 aa26.85■■□□□ 1.89
LINC00543-201ENST00000567234 TGFBRAP1Q8WUH2 860 aa26.85■■□□□ 1.89
LINC00543-201ENST00000567234 TPM3P06753 285 aa26.84■■□□□ 1.89
LINC00543-201ENST00000567234 GUCY1A2P33402 732 aa26.84■■□□□ 1.89
LINC00543-201ENST00000567234 AKAP17AQ02040 695 aaKnown RBP26.84■■□□□ 1.89
LINC00543-201ENST00000567234 EVX2Q03828 476 aa26.84■■□□□ 1.89
LINC00543-201ENST00000567234 FUT2Q10981 343 aa26.84■■□□□ 1.89
LINC00543-201ENST00000567234 SLC39A14Q15043 492 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms