RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 PPP2R5DQ14738 602 aa6.96□□□□□ -1.3
CDH13-209ENST00000567109 FSIP1Q8NA03 581 aa6.96□□□□□ -1.3
CDH13-209ENST00000567109 EFCC1Q9HA90 598 aa6.96□□□□□ -1.3
CDH13-209ENST00000567109 GPR108Q9NPR9 543 aa6.96□□□□□ -1.3
CDH13-209ENST00000567109 IMPACTQ9P2X3 320 aa6.96□□□□□ -1.3
CDH13-209ENST00000567109 NARFQ9UHQ1 456 aa6.96□□□□□ -1.3
CDH13-209ENST00000567109 ABCC4O15439 1325 aa6.96□□□□□ -1.3
CDH13-209ENST00000567109 H7C1D1 291 aa6.96□□□□□ -1.3
CDH13-209ENST00000567109 ZFYP08048 801 aaPredicted RBP6.96□□□□□ -1.3
CDH13-209ENST00000567109 SPAG1Q07617 926 aa6.96□□□□□ -1.3
CDH13-209ENST00000567109 ZBTB33Q86T24 672 aa6.96□□□□□ -1.3
CDH13-209ENST00000567109 ESR2Q92731 530 aa6.96□□□□□ -1.3
CDH13-209ENST00000567109 CNTNAP4Q9C0A0 1308 aa6.96□□□□□ -1.3
CDH13-209ENST00000567109 TRPM1Q7Z4N2 1603 aa6.96□□□□□ -1.3
CDH13-209ENST00000567109 A1BGP04217 495 aa6.96□□□□□ -1.3
CDH13-209ENST00000567109 RTN1Q16799 776 aa6.96□□□□□ -1.3
CDH13-209ENST00000567109 HS2ST1Q7LGA3 356 aa6.96□□□□□ -1.3
CDH13-209ENST00000567109 PPP1R21Q6ZMI0 780 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 USP16Q9Y5T5 823 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 TTC41PQ6P2S7 1318 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 CDHR2Q9BYE9 1310 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 PTPDC1A2A3K4 754 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 ITIH3Q06033 890 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 PSPC1Q8WXF1 523 aaKnown RBP6.95□□□□□ -1.3
CDH13-209ENST00000567109 CNNM2Q9H8M5 875 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 SEPT10Q9P0V9 454 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 IQSEC3Q9UPP2 1182 aaPredicted RBP6.95□□□□□ -1.3
CDH13-209ENST00000567109 LIMCH1Q9UPQ0 1083 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 A0A1B0GUL7 405 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 ALDH1B1P30837 517 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 SLMAPQ14BN4 828 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 PPP1R7Q15435 360 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 UAP1Q16222 522 aaPredicted RBP6.95□□□□□ -1.3
CDH13-209ENST00000567109 RPAINQ86UA6 219 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 IQCDQ96DY2 449 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 CLSTN2Q9H4D0 955 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 ATP6V0A2Q9Y487 856 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 HMGB1P1B2RPK0 211 aaPredicted RBP6.95□□□□□ -1.3
CDH13-209ENST00000567109 TTC30AQ86WT1 665 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 TMTC2Q8N394 836 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 EVI5LQ96CN4 794 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 CCDC77Q9BR77 488 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 NSFL1CQ9UNZ2 370 aaKnown RBP6.95□□□□□ -1.3
CDH13-209ENST00000567109 CSADQ9Y600 493 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 LDHBP07195 334 aaKnown RBP6.95□□□□□ -1.3
CDH13-209ENST00000567109 ALDH3A1P30838 453 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 DNM2P50570 870 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 KRT24Q2M2I5 525 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 BEND3Q5T5X7 828 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 CERS3Q8IU89 383 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 PKD2L1Q9P0L9 805 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 E9PCH4 1651 aa6.95□□□□□ -1.3
CDH13-209ENST00000567109 KCNQ3O43525 872 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 GTF2A1P52655 376 aaPredicted RBP6.94□□□□□ -1.3
CDH13-209ENST00000567109 CCDC38Q502W7 563 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 GOLGA6CA6NDK9 693 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 GOLGA6BA6NDN3 693 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 CCDC169A6NNP5 214 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 GOLGA6DP0CG33 693 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 AFMP43652 599 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 PPFIA1Q13136 1202 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 PRKG1Q13976 671 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 DCAF17Q5H9S7 520 aaPredicted RBP6.94□□□□□ -1.3
CDH13-209ENST00000567109 TMED8Q6PL24 325 aaPredicted RBP6.94□□□□□ -1.3
CDH13-209ENST00000567109 CTAGE1Q96RT6 745 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 GOLGA6AQ9NYA3 693 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 PALM3A6NDB9 673 aaPredicted RBP6.94□□□□□ -1.3
CDH13-209ENST00000567109 BIN1O00499 593 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 DIXDC1Q155Q3 683 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 FERMT3Q86UX7 667 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 CCDC25Q86WR0 208 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 MED10Q9BTT4 135 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 PANK2Q9BZ23 570 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 PPME1Q9Y570 386 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 TMEM131LA2VDJ0 1609 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 AOX1Q06278 1338 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 WDR46O15213 610 aaKnown RBP6.94□□□□□ -1.3
CDH13-209ENST00000567109 BIRC3Q13489 604 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 INF2Q27J81 1249 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 RRAGBQ5VZM2 374 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 KIF9Q9HAQ2 790 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 ATG3Q9NT62 314 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 ASAP1Q9ULH1 1129 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 ESYT2A0FGR8 921 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 TRIM37O94972 964 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 ARHGAP25P42331 645 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 METTL13Q8N6R0 699 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 DCTPP1Q9H773 170 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 FAM204AQ9H8W3 233 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 CEMIPQ8WUJ3 1361 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 SYCE3A1L190 88 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 EBAG9O00559 213 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 SMARCA5O60264 1052 aaPredicted RBP6.94□□□□□ -1.3
CDH13-209ENST00000567109 SKA2Q8WVK7 121 aaPredicted RBP6.94□□□□□ -1.3
CDH13-209ENST00000567109 SNRKQ9NRH2 765 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 MYCLP12524 364 aaPredicted RBP6.94□□□□□ -1.3
CDH13-209ENST00000567109 GTF2F1P35269 517 aaKnown RBP eCLIP6.94□□□□□ -1.3
CDH13-209ENST00000567109 LMBR1Q8WVP7 490 aa6.94□□□□□ -1.3
CDH13-209ENST00000567109 ZBTB43O43298 467 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 ASIC1P78348 528 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms