RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 CCDC51Q96ER9 411 aa17.84■□□□□ 0.45
COMMD4-215ENST00000566843 GBP3Q9H0R5 595 aa17.84■□□□□ 0.45
COMMD4-215ENST00000566843 RSPH14Q9UHP6 348 aa17.84■□□□□ 0.45
COMMD4-215ENST00000566843 PKD1L3Q7Z443 1732 aa17.84■□□□□ 0.45
COMMD4-215ENST00000566843 NID2Q14112 1375 aa17.84■□□□□ 0.45
COMMD4-215ENST00000566843 GOLGA8AA7E2F4 631 aa17.84■□□□□ 0.45
COMMD4-215ENST00000566843 WHAMMP3Q1A5X7 153 aa17.84■□□□□ 0.45
COMMD4-215ENST00000566843 SPATA1Q5VX52 437 aa17.84■□□□□ 0.45
COMMD4-215ENST00000566843 IGSF22Q8N9C0 903 aa17.84■□□□□ 0.45
COMMD4-215ENST00000566843 LY9Q9HBG7 655 aa17.84■□□□□ 0.45
COMMD4-215ENST00000566843 ADD3Q9UEY8 706 aaKnown RBP17.84■□□□□ 0.45
COMMD4-215ENST00000566843 TTF2Q9UNY4 1162 aaKnown RBP17.84■□□□□ 0.45
COMMD4-215ENST00000566843 ABCA3Q99758 1704 aa17.84■□□□□ 0.45
COMMD4-215ENST00000566843 A0A0U1RQJ8 604 aa17.83■□□□□ 0.45
COMMD4-215ENST00000566843 CTAGE9A4FU28 777 aa17.83■□□□□ 0.45
COMMD4-215ENST00000566843 SEMA3EO15041 775 aa17.83■□□□□ 0.45
COMMD4-215ENST00000566843 MFAP3LO75121 409 aa17.83■□□□□ 0.45
COMMD4-215ENST00000566843 MMP1P03956 469 aa17.83■□□□□ 0.45
COMMD4-215ENST00000566843 ADD2P35612 726 aa17.83■□□□□ 0.45
COMMD4-215ENST00000566843 NOP2P46087 812 aaKnown RBP17.83■□□□□ 0.45
COMMD4-215ENST00000566843 SSRP1Q08945 709 aaKnown RBP17.83■□□□□ 0.45
COMMD4-215ENST00000566843 ZNF569Q5MCW4 686 aa17.83■□□□□ 0.45
COMMD4-215ENST00000566843 MICU3Q86XE3 530 aa17.83■□□□□ 0.45
COMMD4-215ENST00000566843 FAM71BQ8TC56 605 aa17.83■□□□□ 0.45
COMMD4-215ENST00000566843 ATRIPQ8WXE1 791 aa17.83■□□□□ 0.45
COMMD4-215ENST00000566843 WASF1Q92558 559 aa17.83■□□□□ 0.45
COMMD4-215ENST00000566843 SRPRBQ9Y5M8 271 aaKnown RBP17.83■□□□□ 0.45
COMMD4-215ENST00000566843 KIF4BQ2VIQ3 1234 aa17.83■□□□□ 0.44
COMMD4-215ENST00000566843 CDKAL1Q5VV42 579 aa17.83■□□□□ 0.44
COMMD4-215ENST00000566843 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.83■□□□□ 0.44
COMMD4-215ENST00000566843 SEC31BQ9NQW1 1179 aa17.83■□□□□ 0.44
COMMD4-215ENST00000566843 FAN1Q9Y2M0 1017 aa17.83■□□□□ 0.44
COMMD4-215ENST00000566843 PHLPP1O60346 1717 aa17.82■□□□□ 0.44
COMMD4-215ENST00000566843 LRP6O75581 1613 aa17.82■□□□□ 0.44
COMMD4-215ENST00000566843 CYP27B1O15528 508 aa17.82■□□□□ 0.44
COMMD4-215ENST00000566843 N4BP1O75113 896 aaKnown RBP17.82■□□□□ 0.44
COMMD4-215ENST00000566843 IFNAR1P17181 557 aa17.82■□□□□ 0.44
COMMD4-215ENST00000566843 LIFRP42702 1097 aa17.82■□□□□ 0.44
COMMD4-215ENST00000566843 CUL4BQ13620 913 aa17.82■□□□□ 0.44
COMMD4-215ENST00000566843 RILPL1Q5EBL4 403 aa17.82■□□□□ 0.44
COMMD4-215ENST00000566843 FOXP1Q9H334 677 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-215ENST00000566843 AKAP11Q9UKA4 1901 aa17.82■□□□□ 0.44
COMMD4-215ENST00000566843 ITIH6Q6UXX5 1313 aa17.82■□□□□ 0.44
COMMD4-215ENST00000566843 BTBD18B2RXH4 712 aa17.82■□□□□ 0.44
COMMD4-215ENST00000566843 VSNL1P62760 191 aa17.82■□□□□ 0.44
COMMD4-215ENST00000566843 CASP8Q14790 479 aa17.82■□□□□ 0.44
COMMD4-215ENST00000566843 GRAMD1CQ8IYS0 662 aa17.82■□□□□ 0.44
COMMD4-215ENST00000566843 SLC35F6Q8N357 371 aa17.82■□□□□ 0.44
COMMD4-215ENST00000566843 SLC26A6Q9BXS9 759 aa17.82■□□□□ 0.44
COMMD4-215ENST00000566843 STRN4Q9NRL3 753 aa17.82■□□□□ 0.44
COMMD4-215ENST00000566843 MYO1AQ9UBC5 1043 aa17.82■□□□□ 0.44
COMMD4-215ENST00000566843 MKRN1Q9UHC7 482 aaKnown RBP17.82■□□□□ 0.44
COMMD4-215ENST00000566843 MYO5AQ9Y4I1 1855 aaKnown RBP17.81■□□□□ 0.44
COMMD4-215ENST00000566843 B4E1Z4 1266 aa17.81■□□□□ 0.44
COMMD4-215ENST00000566843 CTR9Q6PD62 1173 aa17.81■□□□□ 0.44
COMMD4-215ENST00000566843 CTAGE1Q96RT6 745 aa17.81■□□□□ 0.44
COMMD4-215ENST00000566843 NAPGQ99747 312 aaPredicted RBP17.81■□□□□ 0.44
COMMD4-215ENST00000566843 COL16A1Q07092 1604 aaPredicted RBP17.81■□□□□ 0.44
COMMD4-215ENST00000566843 CTAGE15A4D2H0 777 aa17.81■□□□□ 0.44
COMMD4-215ENST00000566843 UBE2Q2LH0YL09 131 aa17.81■□□□□ 0.44
COMMD4-215ENST00000566843 CTAGE8P0CG41 777 aa17.81■□□□□ 0.44
COMMD4-215ENST00000566843 SAFBQ15424 915 aaKnown RBP eCLIP17.81■□□□□ 0.44
COMMD4-215ENST00000566843 CCDC57Q2TAC2 916 aa17.81■□□□□ 0.44
COMMD4-215ENST00000566843 WDR93Q6P2C0 686 aa17.81■□□□□ 0.44
COMMD4-215ENST00000566843 CTAGE6Q86UF2 777 aa17.81■□□□□ 0.44
COMMD4-215ENST00000566843 CNGA4Q8IV77 575 aa17.81■□□□□ 0.44
COMMD4-215ENST00000566843 CTAGE4Q8IX94 777 aa17.81■□□□□ 0.44
COMMD4-215ENST00000566843 DIS3L2Q8IYB7 885 aaKnown RBP17.81■□□□□ 0.44
COMMD4-215ENST00000566843 SUGCTQ9HAC7 445 aa17.81■□□□□ 0.44
COMMD4-215ENST00000566843 WWC3Q9ULE0 1092 aa17.81■□□□□ 0.44
COMMD4-215ENST00000566843 TBC1D2BQ9UPU7 963 aa17.81■□□□□ 0.44
COMMD4-215ENST00000566843 TNNT3P45378 269 aaPredicted RBP17.8■□□□□ 0.44
COMMD4-215ENST00000566843 CABP4P57796 275 aa17.8■□□□□ 0.44
COMMD4-215ENST00000566843 ALX1Q15699 326 aa17.8■□□□□ 0.44
COMMD4-215ENST00000566843 PI16Q6UXB8 463 aa17.8■□□□□ 0.44
COMMD4-215ENST00000566843 NFXL1Q6ZNB6 911 aa17.8■□□□□ 0.44
COMMD4-215ENST00000566843 SH3RF1Q7Z6J0 888 aa17.8■□□□□ 0.44
COMMD4-215ENST00000566843 ZNF512BQ96KM6 892 aaPredicted RBP17.8■□□□□ 0.44
COMMD4-215ENST00000566843 MED4Q9NPJ6 270 aa17.8■□□□□ 0.44
COMMD4-215ENST00000566843 ARHGAP25P42331 645 aa17.79■□□□□ 0.44
COMMD4-215ENST00000566843 UBE3CQ15386 1083 aa17.79■□□□□ 0.44
COMMD4-215ENST00000566843 TMEM67Q5HYA8 995 aa17.79■□□□□ 0.44
COMMD4-215ENST00000566843 TMTC1Q8IUR5 882 aa17.79■□□□□ 0.44
COMMD4-215ENST00000566843 BCL9LQ86UU0 1499 aa17.79■□□□□ 0.44
COMMD4-215ENST00000566843 NUTM2BA6NNL0 878 aaPredicted RBP17.79■□□□□ 0.44
COMMD4-215ENST00000566843 NUTM2EB1AL46 878 aaPredicted RBP17.79■□□□□ 0.44
COMMD4-215ENST00000566843 ADAMTS2O95450 1211 aa17.79■□□□□ 0.44
COMMD4-215ENST00000566843 CD44P16070 742 aaKnown RBP17.79■□□□□ 0.44
COMMD4-215ENST00000566843 MAGEA9P43362 315 aa17.79■□□□□ 0.44
COMMD4-215ENST00000566843 AMPD2Q01433 879 aa17.79■□□□□ 0.44
COMMD4-215ENST00000566843 MAPK8IP2Q13387 824 aaPredicted RBP17.79■□□□□ 0.44
COMMD4-215ENST00000566843 NOM1Q5C9Z4 860 aaKnown RBP17.79■□□□□ 0.44
COMMD4-215ENST00000566843 ISCA1Q9BUE6 129 aa17.79■□□□□ 0.44
COMMD4-215ENST00000566843 ACBD3Q9H3P7 528 aa17.79■□□□□ 0.44
COMMD4-215ENST00000566843 VIPAS39Q9H9C1 493 aa17.79■□□□□ 0.44
COMMD4-215ENST00000566843 CEP131Q9UPN4 1083 aa17.79■□□□□ 0.44
COMMD4-215ENST00000566843 PCDHB6Q9Y5E3 794 aa17.79■□□□□ 0.44
COMMD4-215ENST00000566843 SYNRGQ9UMZ2 1314 aa17.79■□□□□ 0.44
COMMD4-215ENST00000566843 GYPCP04921 128 aa17.78■□□□□ 0.44
COMMD4-215ENST00000566843 RHOXF2BP0C7M4 288 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms