RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 SRRDQ9UH36 339 aa22.7■■□□□ 1.22
IFT140-208ENST00000566818 TCRBV5S4A2TA0A5A2 114 aa22.69■■□□□ 1.22
IFT140-208ENST00000566818 SMARCA5O60264 1052 aaPredicted RBP22.69■■□□□ 1.22
IFT140-208ENST00000566818 ECM2O94769 699 aaPredicted RBP22.69■■□□□ 1.22
IFT140-208ENST00000566818 OSBPP22059 807 aa22.69■■□□□ 1.22
IFT140-208ENST00000566818 MTMR2Q13614 643 aa22.69■■□□□ 1.22
IFT140-208ENST00000566818 EDC3Q96F86 508 aaKnown RBP22.69■■□□□ 1.22
IFT140-208ENST00000566818 ZNF333Q96JL9 665 aa22.69■■□□□ 1.22
IFT140-208ENST00000566818 MYPNQ86TC9 1320 aa22.68■■□□□ 1.22
IFT140-208ENST00000566818 POLR3DP05423 398 aaPredicted RBP22.68■■□□□ 1.22
IFT140-208ENST00000566818 ADD2P35612 726 aa22.68■■□□□ 1.22
IFT140-208ENST00000566818 BACE1P56817 501 aa22.68■■□□□ 1.22
IFT140-208ENST00000566818 ZSCAN25Q6NSZ9 544 aa22.68■■□□□ 1.22
IFT140-208ENST00000566818 RAET1EQ8TD07 263 aa22.68■■□□□ 1.22
IFT140-208ENST00000566818 TMEM106CQ9BVX2 250 aa22.68■■□□□ 1.22
IFT140-208ENST00000566818 ECHDC1Q9NTX5 307 aa22.68■■□□□ 1.22
IFT140-208ENST00000566818 C19orf81C9J6K1 198 aa22.67■■□□□ 1.22
IFT140-208ENST00000566818 CTGFP29279 349 aa22.67■■□□□ 1.22
IFT140-208ENST00000566818 TATDN1Q6P1N9 297 aa22.67■■□□□ 1.22
IFT140-208ENST00000566818 LCORLQ8N3X6 602 aa22.67■■□□□ 1.22
IFT140-208ENST00000566818 YTHDC1Q96MU7 727 aaKnown RBP22.67■■□□□ 1.22
IFT140-208ENST00000566818 MCM9Q9NXL9 1143 aa22.67■■□□□ 1.22
IFT140-208ENST00000566818 MYH7P12883 1935 aa22.67■■□□□ 1.22
IFT140-208ENST00000566818 USP17L10C9JJH3 530 aa22.66■■□□□ 1.22
IFT140-208ENST00000566818 GH2P01242 217 aa22.66■■□□□ 1.22
IFT140-208ENST00000566818 GCLCP48506 637 aaPredicted RBP22.66■■□□□ 1.22
IFT140-208ENST00000566818 FAM110CQ1W6H9 321 aa22.66■■□□□ 1.22
IFT140-208ENST00000566818 MGAMO43451 1857 aa22.66■■□□□ 1.22
IFT140-208ENST00000566818 MBD4O95243 580 aa22.65■■□□□ 1.22
IFT140-208ENST00000566818 IRX3P78415 501 aaPredicted RBP22.65■■□□□ 1.22
IFT140-208ENST00000566818 JAG1P78504 1218 aa22.65■■□□□ 1.22
IFT140-208ENST00000566818 CERKLQ49MI3 558 aaPredicted RBP22.65■■□□□ 1.22
IFT140-208ENST00000566818 SH3TC2Q8TF17 1288 aa22.65■■□□□ 1.22
IFT140-208ENST00000566818 ARMT1Q9H993 441 aa22.65■■□□□ 1.22
IFT140-208ENST00000566818 CABP5Q9NP86 173 aa22.65■■□□□ 1.22
IFT140-208ENST00000566818 UBE3CQ15386 1083 aa22.64■■□□□ 1.21
IFT140-208ENST00000566818 ABCB5Q2M3G0 1257 aa22.64■■□□□ 1.21
IFT140-208ENST00000566818 SHROOM1Q2M3G4 852 aaPredicted RBP22.64■■□□□ 1.21
IFT140-208ENST00000566818 ANKRD13CQ8N6S4 541 aa22.64■■□□□ 1.21
IFT140-208ENST00000566818 SDR42E1Q8WUS8 393 aa22.64■■□□□ 1.21
IFT140-208ENST00000566818 DDRGK1Q96HY6 314 aa22.64■■□□□ 1.21
IFT140-208ENST00000566818 FEZ1Q99689 392 aa22.64■■□□□ 1.21
IFT140-208ENST00000566818 ASCC2Q9H1I8 757 aaPredicted RBP22.64■■□□□ 1.21
IFT140-208ENST00000566818 TAOK2Q9UL54 1235 aa22.64■■□□□ 1.21
IFT140-208ENST00000566818 POTEFA5A3E0 1075 aa22.63■■□□□ 1.21
IFT140-208ENST00000566818 TNPO2O14787 897 aaKnown RBP22.63■■□□□ 1.21
IFT140-208ENST00000566818 PLCD1P51178 756 aa22.63■■□□□ 1.21
IFT140-208ENST00000566818 PRKCZQ05513 592 aa22.63■■□□□ 1.21
IFT140-208ENST00000566818 AMOTL1Q8IY63 956 aa22.63■■□□□ 1.21
IFT140-208ENST00000566818 DCP1AQ9NPI6 582 aaPredicted RBP22.63■■□□□ 1.21
IFT140-208ENST00000566818 ATP8A2Q9NTI2 1148 aa22.63■■□□□ 1.21
IFT140-208ENST00000566818 TNRC18O15417 2968 aaPredicted RBP22.63■■□□□ 1.21
IFT140-208ENST00000566818 GRK4P32298 578 aa22.62■■□□□ 1.21
IFT140-208ENST00000566818 SHMT1P34896 483 aa22.62■■□□□ 1.21
IFT140-208ENST00000566818 RAB3GAP1Q15042 981 aa22.62■■□□□ 1.21
IFT140-208ENST00000566818 USP17L2Q6R6M4 530 aa22.62■■□□□ 1.21
IFT140-208ENST00000566818 PCDHB15Q9Y5E8 787 aa22.62■■□□□ 1.21
IFT140-208ENST00000566818 HOXA7P31268 230 aaPredicted RBP22.61■■□□□ 1.21
IFT140-208ENST00000566818 USP14P54578 494 aa22.61■■□□□ 1.21
IFT140-208ENST00000566818 SLAIN1Q8ND83 568 aa22.61■■□□□ 1.21
IFT140-208ENST00000566818 COA7Q96BR5 231 aa22.61■■□□□ 1.21
IFT140-208ENST00000566818 SWAP70Q9UH65 585 aa22.61■■□□□ 1.21
IFT140-208ENST00000566818 GABPAQ06546 454 aa22.6■■□□□ 1.21
IFT140-208ENST00000566818 GTF3C2Q8WUA4 911 aaPredicted RBP22.6■■□□□ 1.21
IFT140-208ENST00000566818 CENPFP49454 3210 aa22.59■■□□□ 1.21
IFT140-208ENST00000566818 MYCP01106 439 aaPredicted RBP22.59■■□□□ 1.21
IFT140-208ENST00000566818 UBXN2AP68543 259 aa22.59■■□□□ 1.21
IFT140-208ENST00000566818 C12orf42Q96LP6 360 aa22.59■■□□□ 1.21
IFT140-208ENST00000566818 BIN2Q9UBW5 565 aaPredicted RBP22.59■■□□□ 1.21
IFT140-208ENST00000566818 ZBTB47Q9UFB7 747 aaPredicted RBP22.59■■□□□ 1.21
IFT140-208ENST00000566818 PDE4DIPQ5VU43 2346 aa22.59■■□□□ 1.21
IFT140-208ENST00000566818 TTC41PQ6P2S7 1318 aa22.58■■□□□ 1.21
IFT140-208ENST00000566818 ERC2O15083 957 aa22.58■■□□□ 1.21
IFT140-208ENST00000566818 HERVK_113P62684 666 aa22.58■■□□□ 1.21
IFT140-208ENST00000566818 LRRFIP1Q32MZ4 808 aaKnown RBP22.58■■□□□ 1.21
IFT140-208ENST00000566818 SLFNL1Q499Z3 407 aa22.58■■□□□ 1.21
IFT140-208ENST00000566818 KBTBD3Q8NAB2 608 aa22.58■■□□□ 1.21
IFT140-208ENST00000566818 CRBNQ96SW2 442 aa22.58■■□□□ 1.21
IFT140-208ENST00000566818 MORF4L1Q9UBU8 362 aa22.58■■□□□ 1.21
IFT140-208ENST00000566818 GABRQQ9UN88 632 aa22.58■■□□□ 1.21
IFT140-208ENST00000566818 SLC4A4Q9Y6R1 1079 aa22.58■■□□□ 1.21
IFT140-208ENST00000566818 KIAA0100Q14667 2235 aaKnown RBP22.58■■□□□ 1.2
IFT140-208ENST00000566818 MPHOSPH10O00566 681 aaKnown RBP22.57■■□□□ 1.2
IFT140-208ENST00000566818 PRKAB2O43741 272 aa22.57■■□□□ 1.2
IFT140-208ENST00000566818 CYP2D6P10635 497 aa22.57■■□□□ 1.2
IFT140-208ENST00000566818 EN2P19622 333 aaPredicted RBP22.57■■□□□ 1.2
IFT140-208ENST00000566818 FLT3LGP49771 235 aa22.57■■□□□ 1.2
IFT140-208ENST00000566818 IRF5Q13568 498 aa22.57■■□□□ 1.2
IFT140-208ENST00000566818 ZYXQ15942 572 aaKnown RBP22.57■■□□□ 1.2
IFT140-208ENST00000566818 TSHZ3Q63HK5 1081 aa22.57■■□□□ 1.2
IFT140-208ENST00000566818 KIAA1683Q9H0B3 1180 aa22.57■■□□□ 1.2
IFT140-208ENST00000566818 EMILIN3Q9NT22 766 aa22.57■■□□□ 1.2
IFT140-208ENST00000566818 ADCY3O60266 1144 aa22.56■■□□□ 1.2
IFT140-208ENST00000566818 ZFYP08048 801 aaPredicted RBP22.56■■□□□ 1.2
IFT140-208ENST00000566818 P2RX7Q99572 595 aaKnown RBP22.56■■□□□ 1.2
IFT140-208ENST00000566818 MYH8P13535 1937 aa22.56■■□□□ 1.2
IFT140-208ENST00000566818 BAZ2AQ9UIF9 1905 aaKnown RBP22.55■■□□□ 1.2
IFT140-208ENST00000566818 SEPT2Q15019 361 aa22.55■■□□□ 1.2
IFT140-208ENST00000566818 TMEM179Q6ZVK1 233 aa22.55■■□□□ 1.2
IFT140-208ENST00000566818 PXYLP1Q8TE99 480 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms