RNA–Protein interactions for RNA: ENST00000566784.5

PKD1-231, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 493 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-231ENST00000566784 ZBTB21Q9ULJ3 1066 aa16.72■□□□□ 0.27
PKD1-231ENST00000566784 MBD4O95243 580 aa16.71■□□□□ 0.27
PKD1-231ENST00000566784 GDF11O95390 407 aa16.71■□□□□ 0.27
PKD1-231ENST00000566784 PLCD1P51178 756 aa16.71■□□□□ 0.27
PKD1-231ENST00000566784 HMGCS2P54868 508 aa16.71■□□□□ 0.27
PKD1-231ENST00000566784 BACE1P56817 501 aa16.71■□□□□ 0.27
PKD1-231ENST00000566784 HDAC1Q13547 482 aaPredicted RBP16.71■□□□□ 0.27
PKD1-231ENST00000566784 TREML2Q5T2D2 321 aa16.71■□□□□ 0.27
PKD1-231ENST00000566784 KBTBD3Q8NAB2 608 aa16.71■□□□□ 0.27
PKD1-231ENST00000566784 SDR42E1Q8WUS8 393 aa16.71■□□□□ 0.27
PKD1-231ENST00000566784 ARHGAP39Q9C0H5 1083 aa16.71■□□□□ 0.27
PKD1-231ENST00000566784 ARMT1Q9H993 441 aa16.71■□□□□ 0.27
PKD1-231ENST00000566784 ATP8A2Q9NTI2 1148 aa16.71■□□□□ 0.27
PKD1-231ENST00000566784 MCM9Q9NXL9 1143 aa16.71■□□□□ 0.27
PKD1-231ENST00000566784 PNMA3Q9UL41 463 aa16.71■□□□□ 0.27
PKD1-231ENST00000566784 KIAA0100Q14667 2235 aaKnown RBP16.71■□□□□ 0.27
PKD1-231ENST00000566784 POLR3DP05423 398 aaPredicted RBP16.7■□□□□ 0.26
PKD1-231ENST00000566784 PRMT2P55345 433 aa16.7■□□□□ 0.26
PKD1-231ENST00000566784 GABPAQ06546 454 aa16.7■□□□□ 0.26
PKD1-231ENST00000566784 PABPC4Q13310 644 aaKnown RBP eCLIP16.7■□□□□ 0.26
PKD1-231ENST00000566784 SLFNL1Q499Z3 407 aa16.7■□□□□ 0.26
PKD1-231ENST00000566784 GCC1Q96CN9 775 aa16.7■□□□□ 0.26
PKD1-231ENST00000566784 DOCK3Q8IZD9 2030 aa16.7■□□□□ 0.26
PKD1-231ENST00000566784 C19orf81C9J6K1 198 aa16.69■□□□□ 0.26
PKD1-231ENST00000566784 USP17L10C9JJH3 530 aa16.69■□□□□ 0.26
PKD1-231ENST00000566784 ERC2O15083 957 aa16.69■□□□□ 0.26
PKD1-231ENST00000566784 SHMT1P34896 483 aa16.69■□□□□ 0.26
PKD1-231ENST00000566784 SOX10P56693 466 aa16.69■□□□□ 0.26
PKD1-231ENST00000566784 MTMR2Q13614 643 aa16.69■□□□□ 0.26
PKD1-231ENST00000566784 SHROOM1Q2M3G4 852 aaPredicted RBP16.69■□□□□ 0.26
PKD1-231ENST00000566784 CERKLQ49MI3 558 aaPredicted RBP16.69■□□□□ 0.26
PKD1-231ENST00000566784 TSHZ3Q63HK5 1081 aa16.69■□□□□ 0.26
PKD1-231ENST00000566784 SMCR8Q8TEV9 937 aaPredicted RBP16.69■□□□□ 0.26
PKD1-231ENST00000566784 ARMC5Q96C12 935 aa16.69■□□□□ 0.26
PKD1-231ENST00000566784 GH2P01242 217 aa16.68■□□□□ 0.26
PKD1-231ENST00000566784 CHGBP05060 677 aa16.68■□□□□ 0.26
PKD1-231ENST00000566784 CTGFP29279 349 aa16.68■□□□□ 0.26
PKD1-231ENST00000566784 PSMC4P43686 418 aa16.68■□□□□ 0.26
PKD1-231ENST00000566784 MLLT1Q03111 559 aaPredicted RBP16.68■□□□□ 0.26
PKD1-231ENST00000566784 PI4K2BQ8TCG2 481 aa16.68■□□□□ 0.26
PKD1-231ENST00000566784 TRIM47Q96LD4 638 aa16.68■□□□□ 0.26
PKD1-231ENST00000566784 PUS7LQ9H0K6 701 aaKnown RBP16.68■□□□□ 0.26
PKD1-231ENST00000566784 CENPFP49454 3210 aa16.68■□□□□ 0.26
PKD1-231ENST00000566784 PRKAB2O43741 272 aa16.67■□□□□ 0.26
PKD1-231ENST00000566784 GLRX3O76003 335 aaKnown RBP16.67■□□□□ 0.26
PKD1-231ENST00000566784 ZFYP08048 801 aaPredicted RBP16.67■□□□□ 0.26
PKD1-231ENST00000566784 MX1P20591 662 aa16.67■□□□□ 0.26
PKD1-231ENST00000566784 HOXD10P28358 340 aa16.67■□□□□ 0.26
PKD1-231ENST00000566784 HOXA7P31268 230 aaPredicted RBP16.67■□□□□ 0.26
PKD1-231ENST00000566784 ABCB5Q2M3G0 1257 aa16.67■□□□□ 0.26
PKD1-231ENST00000566784 OTUD7AQ8TE49 926 aaPredicted RBP16.67■□□□□ 0.26
PKD1-231ENST00000566784 CABP5Q9NP86 173 aa16.67■□□□□ 0.26
PKD1-231ENST00000566784 TMOD4Q9NZQ9 345 aa16.67■□□□□ 0.26
PKD1-231ENST00000566784 ZBTB47Q9UFB7 747 aaPredicted RBP16.67■□□□□ 0.26
PKD1-231ENST00000566784 SWAP70Q9UH65 585 aa16.67■□□□□ 0.26
PKD1-231ENST00000566784 PTCH2Q9Y6C5 1203 aa16.67■□□□□ 0.26
PKD1-231ENST00000566784 SALL3Q9BXA9 1300 aa16.67■□□□□ 0.26
PKD1-231ENST00000566784 RNF113AO15541 343 aaKnown RBP16.66■□□□□ 0.26
PKD1-231ENST00000566784 FMNL1O95466 1100 aaPredicted RBP16.66■□□□□ 0.26
PKD1-231ENST00000566784 OSBPP22059 807 aa16.66■□□□□ 0.26
PKD1-231ENST00000566784 GCLCP48506 637 aaPredicted RBP16.66■□□□□ 0.26
PKD1-231ENST00000566784 FCGRTP55899 365 aa16.66■□□□□ 0.26
PKD1-231ENST00000566784 FAM110CQ1W6H9 321 aa16.66■□□□□ 0.26
PKD1-231ENST00000566784 LRRFIP1Q32MZ4 808 aaKnown RBP16.66■□□□□ 0.26
PKD1-231ENST00000566784 ANKRD45Q5TZF3 282 aa16.66■□□□□ 0.26
PKD1-231ENST00000566784 PDE4DIPQ5VU43 2346 aa16.66■□□□□ 0.26
PKD1-231ENST00000566784 AMOTL1Q8IY63 956 aa16.66■□□□□ 0.26
PKD1-231ENST00000566784 APPBP2Q92624 585 aa16.66■□□□□ 0.26
PKD1-231ENST00000566784 DDRGK1Q96HY6 314 aa16.66■□□□□ 0.26
PKD1-231ENST00000566784 ASCC2Q9H1I8 757 aaPredicted RBP16.66■□□□□ 0.26
PKD1-231ENST00000566784 SRRDQ9UH36 339 aa16.66■□□□□ 0.26
PKD1-231ENST00000566784 SLC4A4Q9Y6R1 1079 aa16.66■□□□□ 0.26
PKD1-231ENST00000566784 CYP2D6P10635 497 aa16.65■□□□□ 0.26
PKD1-231ENST00000566784 EVX2Q03828 476 aa16.65■□□□□ 0.26
PKD1-231ENST00000566784 RAB3GAP1Q15042 981 aa16.65■□□□□ 0.26
PKD1-231ENST00000566784 SLC9C1Q4G0N8 1177 aa16.65■□□□□ 0.26
PKD1-231ENST00000566784 C12orf60Q5U649 245 aa16.65■□□□□ 0.26
PKD1-231ENST00000566784 USP17L2Q6R6M4 530 aa16.65■□□□□ 0.26
PKD1-231ENST00000566784 NBPF11Q86T75 865 aa16.65■□□□□ 0.26
PKD1-231ENST00000566784 C12orf42Q96LP6 360 aa16.65■□□□□ 0.26
PKD1-231ENST00000566784 STRBPQ96SI9 672 aaKnown RBP16.65■□□□□ 0.26
PKD1-231ENST00000566784 GUCY1A2P33402 732 aa16.64■□□□□ 0.25
PKD1-231ENST00000566784 USP14P54578 494 aa16.64■□□□□ 0.25
PKD1-231ENST00000566784 IRX3P78415 501 aaPredicted RBP16.64■□□□□ 0.25
PKD1-231ENST00000566784 GIMAP6Q6P9H5 292 aa16.64■□□□□ 0.25
PKD1-231ENST00000566784 ANKRD13CQ8N6S4 541 aa16.64■□□□□ 0.25
PKD1-231ENST00000566784 OSBP2Q969R2 916 aa16.64■□□□□ 0.25
PKD1-231ENST00000566784 ZNF333Q96JL9 665 aa16.64■□□□□ 0.25
PKD1-231ENST00000566784 EMILIN3Q9NT22 766 aa16.64■□□□□ 0.25
PKD1-231ENST00000566784 MYPNQ86TC9 1320 aa16.64■□□□□ 0.25
PKD1-231ENST00000566784 TNRC18O15417 2968 aaPredicted RBP16.63■□□□□ 0.25
PKD1-231ENST00000566784 USP17L12C9JPN9 530 aa16.63■□□□□ 0.25
PKD1-231ENST00000566784 USP17L21D6R901 530 aa16.63■□□□□ 0.25
PKD1-231ENST00000566784 FEZ1Q99689 392 aa16.63■□□□□ 0.25
PKD1-231ENST00000566784 KIAA1683Q9H0B3 1180 aa16.63■□□□□ 0.25
PKD1-231ENST00000566784 RWDD1Q9H446 243 aaPredicted RBP16.63■□□□□ 0.25
PKD1-231ENST00000566784 ARPP21Q9UBL0 812 aaPredicted RBP16.63■□□□□ 0.25
PKD1-231ENST00000566784 STAP2Q9UGK3 403 aa16.63■□□□□ 0.25
PKD1-231ENST00000566784 ECM2O94769 699 aaPredicted RBP16.62■□□□□ 0.25
PKD1-231ENST00000566784 GNAT2P19087 354 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms