RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 RRP1P56182 461 aaKnown RBP12.27□□□□□ -0.45
GTF3C1-206ENST00000566779 KIF22Q14807 665 aa12.27□□□□□ -0.45
GTF3C1-206ENST00000566779 TTF1Q15361 905 aaPredicted RBP12.27□□□□□ -0.45
GTF3C1-206ENST00000566779 PKN2Q16513 984 aaKnown RBP12.27□□□□□ -0.45
GTF3C1-206ENST00000566779 NOM1Q5C9Z4 860 aaKnown RBP12.27□□□□□ -0.45
GTF3C1-206ENST00000566779 MS4A3Q96HJ5 214 aa12.27□□□□□ -0.45
GTF3C1-206ENST00000566779 ARHGAP39Q9C0H5 1083 aa12.27□□□□□ -0.45
GTF3C1-206ENST00000566779 KCNH4Q9UQ05 1017 aa12.27□□□□□ -0.45
GTF3C1-206ENST00000566779 TRPC6Q9Y210 931 aa12.27□□□□□ -0.45
GTF3C1-206ENST00000566779 MAGEB6P1A0A0J9YX57 407 aa12.26□□□□□ -0.45
GTF3C1-206ENST00000566779 MAP4K4O95819 1239 aaPredicted RBP12.26□□□□□ -0.45
GTF3C1-206ENST00000566779 CYP2C8P10632 490 aa12.26□□□□□ -0.45
GTF3C1-206ENST00000566779 PDE6AP16499 860 aa12.26□□□□□ -0.45
GTF3C1-206ENST00000566779 MLLT1Q03111 559 aaPredicted RBP12.26□□□□□ -0.45
GTF3C1-206ENST00000566779 MFSD10Q14728 455 aa12.26□□□□□ -0.45
GTF3C1-206ENST00000566779 SLC9C2Q5TAH2 1124 aa12.26□□□□□ -0.45
GTF3C1-206ENST00000566779 TSHZ3Q63HK5 1081 aa12.26□□□□□ -0.45
GTF3C1-206ENST00000566779 ANKRD23Q86SG2 305 aa12.26□□□□□ -0.45
GTF3C1-206ENST00000566779 PARK7Q99497 189 aaKnown RBP12.26□□□□□ -0.45
GTF3C1-206ENST00000566779 CRISPLD2Q9H0B8 497 aa12.26□□□□□ -0.45
GTF3C1-206ENST00000566779 PAG1Q9NWQ8 432 aa12.26□□□□□ -0.45
GTF3C1-206ENST00000566779 KIAA0100Q14667 2235 aaKnown RBP12.26□□□□□ -0.45
GTF3C1-206ENST00000566779 DOCK3Q8IZD9 2030 aa12.25□□□□□ -0.45
GTF3C1-206ENST00000566779 TLR2O60603 784 aa12.25□□□□□ -0.45
GTF3C1-206ENST00000566779 CAP1Q01518 475 aa12.25□□□□□ -0.45
GTF3C1-206ENST00000566779 SHROOM1Q2M3G4 852 aaPredicted RBP12.25□□□□□ -0.45
GTF3C1-206ENST00000566779 SMCR8Q8TEV9 937 aaPredicted RBP12.25□□□□□ -0.45
GTF3C1-206ENST00000566779 CRBNQ96SW2 442 aa12.25□□□□□ -0.45
GTF3C1-206ENST00000566779 DHX36Q9H2U1 1008 aaKnown RBP12.25□□□□□ -0.45
GTF3C1-206ENST00000566779 PI4KBQ9UBF8 816 aa12.25□□□□□ -0.45
GTF3C1-206ENST00000566779 ZNF532Q9HCE3 1301 aa12.25□□□□□ -0.45
GTF3C1-206ENST00000566779 A0A0G2JLL6 359 aaPredicted RBP12.24□□□□□ -0.45
GTF3C1-206ENST00000566779 CXCL11O14625 94 aa12.24□□□□□ -0.45
GTF3C1-206ENST00000566779 HMGCS2P54868 508 aa12.24□□□□□ -0.45
GTF3C1-206ENST00000566779 PPP4CP60510 307 aa12.24□□□□□ -0.45
GTF3C1-206ENST00000566779 SPP2Q13103 211 aa12.24□□□□□ -0.45
GTF3C1-206ENST00000566779 RRP1BQ14684 758 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-206ENST00000566779 SLFNL1Q499Z3 407 aa12.24□□□□□ -0.45
GTF3C1-206ENST00000566779 FASTKD5Q7L8L6 764 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-206ENST00000566779 RBBP6Q7Z6E9 1792 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-206ENST00000566779 PRRT2Q7Z6L0 340 aaPredicted RBP12.24□□□□□ -0.45
GTF3C1-206ENST00000566779 GPATCH3Q96I76 525 aa12.24□□□□□ -0.45
GTF3C1-206ENST00000566779 HERC5Q9UII4 1024 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-206ENST00000566779 AFG3L2Q9Y4W6 797 aa12.24□□□□□ -0.45
GTF3C1-206ENST00000566779 PTCH2Q9Y6C5 1203 aa12.24□□□□□ -0.45
GTF3C1-206ENST00000566779 TBC1D12O60347 775 aa12.23□□□□□ -0.45
GTF3C1-206ENST00000566779 MBD4O95243 580 aa12.23□□□□□ -0.45
GTF3C1-206ENST00000566779 FMNL1O95466 1100 aaPredicted RBP12.23□□□□□ -0.45
GTF3C1-206ENST00000566779 POLR3DP05423 398 aaPredicted RBP12.23□□□□□ -0.45
GTF3C1-206ENST00000566779 CAP2P40123 477 aa12.23□□□□□ -0.45
GTF3C1-206ENST00000566779 LACTBP83111 547 aaPredicted RBP12.23□□□□□ -0.45
GTF3C1-206ENST00000566779 MTMR2Q13614 643 aa12.23□□□□□ -0.45
GTF3C1-206ENST00000566779 MOGSQ13724 837 aa12.23□□□□□ -0.45
GTF3C1-206ENST00000566779 ARHGEF6Q15052 776 aa12.23□□□□□ -0.45
GTF3C1-206ENST00000566779 ZYXQ15942 572 aaKnown RBP12.23□□□□□ -0.45
GTF3C1-206ENST00000566779 TREML2Q5T2D2 321 aa12.23□□□□□ -0.45
GTF3C1-206ENST00000566779 LCORLQ8N3X6 602 aa12.23□□□□□ -0.45
GTF3C1-206ENST00000566779 FEZ1Q99689 392 aa12.23□□□□□ -0.45
GTF3C1-206ENST00000566779 CRNKL1Q9BZJ0 848 aaKnown RBP12.23□□□□□ -0.45
GTF3C1-206ENST00000566779 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.23□□□□□ -0.45
GTF3C1-206ENST00000566779 DNAJC18Q9H819 358 aa12.23□□□□□ -0.45
GTF3C1-206ENST00000566779 ARMT1Q9H993 441 aa12.23□□□□□ -0.45
GTF3C1-206ENST00000566779 AS3MTQ9HBK9 375 aa12.23□□□□□ -0.45
GTF3C1-206ENST00000566779 ZCCHC17Q9NP64 241 aaKnown RBP12.23□□□□□ -0.45
GTF3C1-206ENST00000566779 PTPN22Q9Y2R2 807 aa12.23□□□□□ -0.45
GTF3C1-206ENST00000566779 PDE4DIPQ5VU43 2346 aa12.23□□□□□ -0.45
GTF3C1-206ENST00000566779 USP17L5A8MUK1 530 aa12.22□□□□□ -0.45
GTF3C1-206ENST00000566779 CHGBP05060 677 aa12.22□□□□□ -0.45
GTF3C1-206ENST00000566779 ATP5JP18859 108 aa12.22□□□□□ -0.45
GTF3C1-206ENST00000566779 PSMC4P43686 418 aa12.22□□□□□ -0.45
GTF3C1-206ENST00000566779 SLC9C1Q4G0N8 1177 aa12.22□□□□□ -0.45
GTF3C1-206ENST00000566779 GPAT2Q6NUI2 795 aa12.22□□□□□ -0.45
GTF3C1-206ENST00000566779 ZNF280CQ8ND82 737 aa12.22□□□□□ -0.45
GTF3C1-206ENST00000566779 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.22□□□□□ -0.45
GTF3C1-206ENST00000566779 SDR42E1Q8WUS8 393 aa12.22□□□□□ -0.45
GTF3C1-206ENST00000566779 MCM9Q9NXL9 1143 aa12.22□□□□□ -0.45
GTF3C1-206ENST00000566779 ZBTB21Q9ULJ3 1066 aa12.22□□□□□ -0.45
GTF3C1-206ENST00000566779 C19orf67A6NJJ6 358 aa12.21□□□□□ -0.45
GTF3C1-206ENST00000566779 MPHOSPH10O00566 681 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-206ENST00000566779 GH2P01242 217 aa12.21□□□□□ -0.45
GTF3C1-206ENST00000566779 CYP2D6P10635 497 aa12.21□□□□□ -0.45
GTF3C1-206ENST00000566779 MAP3K10Q02779 954 aa12.21□□□□□ -0.45
GTF3C1-206ENST00000566779 RAB3GAP1Q15042 981 aa12.21□□□□□ -0.45
GTF3C1-206ENST00000566779 CERS3Q8IU89 383 aa12.21□□□□□ -0.45
GTF3C1-206ENST00000566779 ANKRD13CQ8N6S4 541 aa12.21□□□□□ -0.45
GTF3C1-206ENST00000566779 SH3TC2Q8TF17 1288 aa12.21□□□□□ -0.45
GTF3C1-206ENST00000566779 DDX27Q96GQ7 796 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-206ENST00000566779 HAUS7Q99871 368 aa12.21□□□□□ -0.45
GTF3C1-206ENST00000566779 RIOK1Q9BRS2 568 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-206ENST00000566779 ECHDC1Q9NTX5 307 aa12.21□□□□□ -0.45
GTF3C1-206ENST00000566779 TMOD4Q9NZQ9 345 aa12.21□□□□□ -0.45
GTF3C1-206ENST00000566779 SERPINB13Q9UIV8 391 aa12.21□□□□□ -0.45
GTF3C1-206ENST00000566779 AGTPBP1Q9UPW5 1226 aa12.21□□□□□ -0.45
GTF3C1-206ENST00000566779 PCDHB15Q9Y5E8 787 aa12.21□□□□□ -0.45
GTF3C1-206ENST00000566779 MYPNQ86TC9 1320 aa12.2□□□□□ -0.46
GTF3C1-206ENST00000566779 ADGRA2Q96PE1 1338 aa12.2□□□□□ -0.46
GTF3C1-206ENST00000566779 ASNSP08243 561 aa12.2□□□□□ -0.46
GTF3C1-206ENST00000566779 ADD2P35612 726 aa12.2□□□□□ -0.46
GTF3C1-206ENST00000566779 IRX3P78415 501 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-206ENST00000566779 JAG1P78504 1218 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms