RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 CCDC189A1A4V9 331 aa4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 F8W735 103 aaPredicted RBP4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 DLL1O00548 723 aa4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 KIF3BO15066 747 aa4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 CAND2O75155 1236 aa4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 XYLBO75191 536 aa4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 WDHD1O75717 1129 aaPredicted RBP4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 MAP3K6O95382 1288 aa4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 F13A1P00488 732 aa4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 CYP2E1P05181 493 aaPredicted RBP4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 TFE3P19532 575 aaPredicted RBP4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 STAT3P40763 770 aa4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 GIPRP48546 466 aa4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 LMNB2Q03252 620 aa4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 HDAC1Q13547 482 aaPredicted RBP4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 PERM1Q5SV97 790 aa4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 ZFYVE27Q5T4F4 411 aa4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 TTC39BQ5VTQ0 682 aaPredicted RBP4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 WWC2Q6AWC2 1192 aa4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 SLC4A10Q6U841 1118 aa4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 C6orf15Q6UXA7 325 aaPredicted RBP4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 KSR2Q6VAB6 950 aa4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 BNC2Q6ZN30 1099 aaPredicted RBP4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 FAM196AQ6ZSG2 479 aa4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 C11orf96Q7Z7L8 435 aa4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 C14orf80Q86SX3 495 aa4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 THNSL2Q86YJ6 484 aa4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 SLITRK4Q8IW52 837 aa4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 LPIN3Q9BQK8 851 aa4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 CEP41Q9BYV8 373 aa4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 LIN7BQ9HAP6 207 aa4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 PPM1HQ9ULR3 514 aa4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.34□□□□□ -1.71
HERPUD1-211ENST00000566550 TMEM238LA0A1B0GVL6 79 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 SHTN1A0MZ66 631 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 ALG1L2C9J202 215 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 PDE8AO60658 829 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 KATNA1O75449 491 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 ALX3O95076 343 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 MED26O95402 600 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 EDN3P14138 238 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 INPP5BP32019 993 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 SOX5P35711 763 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 GUCY2FP51841 1108 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 EPHB1P54762 984 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 CBX2Q14781 532 aaPredicted RBP4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 GRIK5Q16478 980 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 NFE2Q16621 373 aaPredicted RBP4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 CWF19L2Q2TBE0 894 aaKnown RBP4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 TM4SF20Q53R12 229 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 KIAA0319Q5VV43 1072 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 IER5Q5VY09 327 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 RUFY4Q6ZNE9 571 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 DHX32Q7L7V1 743 aaKnown RBP4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 LSRQ86X29 649 aaPredicted RBP4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 ZSWIM2Q8NEG5 633 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 MTMR8Q96EF0 704 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 KRTAP4-9Q9BYQ8 210 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 SMG9Q9H0W8 520 aaKnown RBP4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 CAAP1Q9H8G2 361 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 BRMS1Q9HCU9 246 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 ABCB6Q9NP58 842 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 C11orf16Q9NQ32 467 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 KCNQ5Q9NR82 932 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 GPN3Q9UHW5 284 aaPredicted RBP4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 ZMYM5Q9UJ78 669 aa4.33□□□□□ -1.72
HERPUD1-211ENST00000566550 KCNQ2O43526 872 aa4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 DEAF1O75398 565 aaPredicted RBP4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 RASGRP1O95267 797 aa4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 MYL1P05976 194 aa4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 POU3F3P20264 500 aaPredicted RBP4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 ZNF165P49910 485 aa4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 JAG1P78504 1218 aa4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 NFIAQ12857 509 aa4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 LONRF3Q496Y0 759 aa4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 PEAR1Q5VY43 1037 aaPredicted RBP4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 CNNM4Q6P4Q7 775 aa4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 KRT25Q7Z3Z0 450 aa4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 DTX1Q86Y01 620 aa4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 TEX2Q8IWB9 1127 aa4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 CACTIN-AS1Q8N1I8 211 aa4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 MYO1HQ8N1T3 1032 aa4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 SYNPOQ8N3V7 929 aa4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 OR6P1Q8NGX9 317 aa4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 ANKRD24Q8TF21 1146 aa4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 ASIC4Q96FT7 647 aa4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 CEP44Q9C0F1 390 aa4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 MUC3BQ9H195 1237 aa4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 MIR1-1HGQ9H1L0 117 aa4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 SFMBT1Q9UHJ3 866 aa4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 NOB1Q9ULX3 412 aaKnown RBP4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 PCDHB5Q9Y5E4 795 aa4.32□□□□□ -1.72
HERPUD1-211ENST00000566550 PAGE1O75459 146 aa4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 BPNT1O95861 308 aa4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 FOSP01100 380 aaPredicted RBP4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 FAM153BP0C7A2 387 aa4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 EIF2AK2P19525 551 aaKnown RBP4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 SPINK2P20155 84 aa4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 RAB27AP51159 221 aa4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 ZNF157P51786 506 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms