RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 FBXO46Q6PJ61 603 aaPredicted RBP23.25■■□□□ 1.31
CCDC113-204ENST00000566498 OTOP1Q7RTM1 612 aa23.25■■□□□ 1.31
CCDC113-204ENST00000566498 PI4K2BQ8TCG2 481 aa23.25■■□□□ 1.31
CCDC113-204ENST00000566498 PARK7Q99497 189 aaKnown RBP23.25■■□□□ 1.31
CCDC113-204ENST00000566498 MYH7P12883 1935 aa23.25■■□□□ 1.31
CCDC113-204ENST00000566498 PHIPQ8WWQ0 1821 aa23.24■■□□□ 1.31
CCDC113-204ENST00000566498 GH2P01242 217 aa23.24■■□□□ 1.31
CCDC113-204ENST00000566498 IGHDP01880 384 aa23.24■■□□□ 1.31
CCDC113-204ENST00000566498 ZFYP08048 801 aaPredicted RBP23.24■■□□□ 1.31
CCDC113-204ENST00000566498 CYP2C8P10632 490 aa23.24■■□□□ 1.31
CCDC113-204ENST00000566498 HMGCS2P54868 508 aa23.24■■□□□ 1.31
CCDC113-204ENST00000566498 IRX6P78412 446 aaPredicted RBP23.24■■□□□ 1.31
CCDC113-204ENST00000566498 SHROOM1Q2M3G4 852 aaPredicted RBP23.24■■□□□ 1.31
CCDC113-204ENST00000566498 AMOTL1Q8IY63 956 aa23.24■■□□□ 1.31
CCDC113-204ENST00000566498 WDR18Q9BV38 432 aa23.24■■□□□ 1.31
CCDC113-204ENST00000566498 ZBTB21Q9ULJ3 1066 aa23.24■■□□□ 1.31
CCDC113-204ENST00000566498 ECM2O94769 699 aaPredicted RBP23.23■■□□□ 1.31
CCDC113-204ENST00000566498 C17orf99Q6UX52 265 aa23.23■■□□□ 1.31
CCDC113-204ENST00000566498 FSD1Q9BTV5 496 aa23.23■■□□□ 1.31
CCDC113-204ENST00000566498 LNPKQ9C0E8 428 aa23.23■■□□□ 1.31
CCDC113-204ENST00000566498 CABP5Q9NP86 173 aa23.23■■□□□ 1.31
CCDC113-204ENST00000566498 HPS5Q9UPZ3 1129 aa23.23■■□□□ 1.31
CCDC113-204ENST00000566498 CYP2D6P10635 497 aa23.22■■□□□ 1.31
CCDC113-204ENST00000566498 RAB3GAP1Q15042 981 aa23.22■■□□□ 1.31
CCDC113-204ENST00000566498 ABCB5Q2M3G0 1257 aa23.22■■□□□ 1.31
CCDC113-204ENST00000566498 PROCA1Q8NCQ7 364 aaPredicted RBP23.22■■□□□ 1.31
CCDC113-204ENST00000566498 APPBP2Q92624 585 aa23.22■■□□□ 1.31
CCDC113-204ENST00000566498 STRBPQ96SI9 672 aaKnown RBP23.22■■□□□ 1.31
CCDC113-204ENST00000566498 TMOD4Q9NZQ9 345 aa23.22■■□□□ 1.31
CCDC113-204ENST00000566498 AGTPBP1Q9UPW5 1226 aa23.22■■□□□ 1.31
CCDC113-204ENST00000566498 SLC45A1Q9Y2W3 748 aa23.22■■□□□ 1.31
CCDC113-204ENST00000566498 USP17L10C9JJH3 530 aa23.21■■□□□ 1.31
CCDC113-204ENST00000566498 USP17L12C9JPN9 530 aa23.21■■□□□ 1.31
CCDC113-204ENST00000566498 USP17L21D6R901 530 aa23.21■■□□□ 1.31
CCDC113-204ENST00000566498 SHMT1P34896 483 aa23.21■■□□□ 1.31
CCDC113-204ENST00000566498 PDE1AP54750 535 aa23.21■■□□□ 1.31
CCDC113-204ENST00000566498 BACE1P56817 501 aa23.21■■□□□ 1.31
CCDC113-204ENST00000566498 EVX2Q03828 476 aa23.21■■□□□ 1.31
CCDC113-204ENST00000566498 MTMR2Q13614 643 aa23.21■■□□□ 1.31
CCDC113-204ENST00000566498 TREML2Q5T2D2 321 aa23.21■■□□□ 1.31
CCDC113-204ENST00000566498 SMC5Q8IY18 1101 aa23.21■■□□□ 1.31
CCDC113-204ENST00000566498 SMCR8Q8TEV9 937 aaPredicted RBP23.21■■□□□ 1.31
CCDC113-204ENST00000566498 OSBP2Q969R2 916 aa23.21■■□□□ 1.31
CCDC113-204ENST00000566498 NAV1Q8NEY1 1877 aa23.2■■□□□ 1.3
CCDC113-204ENST00000566498 C19orf81C9J6K1 198 aa23.2■■□□□ 1.3
CCDC113-204ENST00000566498 MPHOSPH10O00566 681 aaKnown RBP23.2■■□□□ 1.3
CCDC113-204ENST00000566498 LACTBP83111 547 aaPredicted RBP23.2■■□□□ 1.3
CCDC113-204ENST00000566498 PABPC4Q13310 644 aaKnown RBP eCLIP23.2■■□□□ 1.3
CCDC113-204ENST00000566498 STAP2Q9UGK3 403 aa23.2■■□□□ 1.3
CCDC113-204ENST00000566498 SALL3Q9BXA9 1300 aa23.19■■□□□ 1.3
CCDC113-204ENST00000566498 APPP05067 770 aa23.19■■□□□ 1.3
CCDC113-204ENST00000566498 CAP1Q01518 475 aa23.19■■□□□ 1.3
CCDC113-204ENST00000566498 GABPAQ06546 454 aa23.19■■□□□ 1.3
CCDC113-204ENST00000566498 SH3D19Q5HYK7 790 aa23.19■■□□□ 1.3
CCDC113-204ENST00000566498 C12orf60Q5U649 245 aa23.19■■□□□ 1.3
CCDC113-204ENST00000566498 DYNLL2Q96FJ2 89 aa23.19■■□□□ 1.3
CCDC113-204ENST00000566498 PNMA3Q9UL41 463 aa23.19■■□□□ 1.3
CCDC113-204ENST00000566498 PTPN22Q9Y2R2 807 aa23.19■■□□□ 1.3
CCDC113-204ENST00000566498 PTPRFP10586 1907 aa23.19■■□□□ 1.3
CCDC113-204ENST00000566498 CYP2D7A0A087X1C5 515 aa23.18■■□□□ 1.3
CCDC113-204ENST00000566498 OSBPP22059 807 aa23.18■■□□□ 1.3
CCDC113-204ENST00000566498 CHD1LQ86WJ1 897 aa23.18■■□□□ 1.3
CCDC113-204ENST00000566498 ARHGAP39Q9C0H5 1083 aa23.18■■□□□ 1.3
CCDC113-204ENST00000566498 SWAP70Q9UH65 585 aa23.18■■□□□ 1.3
CCDC113-204ENST00000566498 BAZ2AQ9UIF9 1905 aaKnown RBP23.18■■□□□ 1.3
CCDC113-204ENST00000566498 GPAA1O43292 621 aa23.17■■□□□ 1.3
CCDC113-204ENST00000566498 FMNL1O95466 1100 aaPredicted RBP23.17■■□□□ 1.3
CCDC113-204ENST00000566498 PSMC4P43686 418 aa23.17■■□□□ 1.3
CCDC113-204ENST00000566498 CTR9Q6PD62 1173 aa23.17■■□□□ 1.3
CCDC113-204ENST00000566498 SLC44A5Q8NCS7 719 aa23.17■■□□□ 1.3
CCDC113-204ENST00000566498 FEZ1Q99689 392 aa23.17■■□□□ 1.3
CCDC113-204ENST00000566498 ADGRA2Q96PE1 1338 aa23.16■■□□□ 1.3
CCDC113-204ENST00000566498 M0R2C6 588 aa23.16■■□□□ 1.3
CCDC113-204ENST00000566498 GNAT2P19087 354 aa23.16■■□□□ 1.3
CCDC113-204ENST00000566498 NUCB1Q02818 461 aa23.16■■□□□ 1.3
CCDC113-204ENST00000566498 ZYXQ15942 572 aaKnown RBP23.16■■□□□ 1.3
CCDC113-204ENST00000566498 USP17L2Q6R6M4 530 aa23.16■■□□□ 1.3
CCDC113-204ENST00000566498 EVI5LQ96CN4 794 aa23.16■■□□□ 1.3
CCDC113-204ENST00000566498 SEC62Q99442 399 aaKnown RBP23.16■■□□□ 1.3
CCDC113-204ENST00000566498 GSG1L2A8MUP6 293 aa23.15■■□□□ 1.3
CCDC113-204ENST00000566498 MINDY4BA8MYZ0 360 aa23.15■■□□□ 1.3
CCDC113-204ENST00000566498 BCRP11274 1271 aa23.15■■□□□ 1.3
CCDC113-204ENST00000566498 CDK8P49336 464 aa23.15■■□□□ 1.3
CCDC113-204ENST00000566498 SEPT2Q15019 361 aa23.15■■□□□ 1.3
CCDC113-204ENST00000566498 ASCC2Q9H1I8 757 aaPredicted RBP23.15■■□□□ 1.3
CCDC113-204ENST00000566498 TRIM6-TRIM34B2RNG4 842 aa23.14■■□□□ 1.29
CCDC113-204ENST00000566498 PATL2C9JE40 543 aaKnown RBP23.14■■□□□ 1.29
CCDC113-204ENST00000566498 SMIM22K7EJ46 135 aa23.14■■□□□ 1.29
CCDC113-204ENST00000566498 GNRH1P01148 92 aa23.14■■□□□ 1.29
CCDC113-204ENST00000566498 HOXD10P28358 340 aa23.14■■□□□ 1.29
CCDC113-204ENST00000566498 IRX3P78415 501 aaPredicted RBP23.14■■□□□ 1.29
CCDC113-204ENST00000566498 GIMAP6Q6P9H5 292 aa23.14■■□□□ 1.29
CCDC113-204ENST00000566498 ANKRD13CQ8N6S4 541 aa23.14■■□□□ 1.29
CCDC113-204ENST00000566498 EMILIN3Q9NT22 766 aa23.14■■□□□ 1.29
CCDC113-204ENST00000566498 TAOK2Q9UL54 1235 aa23.14■■□□□ 1.29
CCDC113-204ENST00000566498 DDX60LQ5H9U9 1706 aaKnown RBP23.13■■□□□ 1.29
CCDC113-204ENST00000566498 TDO2P48775 406 aa23.13■■□□□ 1.29
CCDC113-204ENST00000566498 ZMYM1Q5SVZ6 1142 aa23.13■■□□□ 1.29
CCDC113-204ENST00000566498 STK11IPQ8N1F8 1099 aa23.13■■□□□ 1.29
CCDC113-204ENST00000566498 ACER1Q8TDN7 264 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms