RNA–Protein interactions for RNA: ENST00000566087.5

NSMCE1-211, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-211ENST00000566087 ZNF112Q9UJU3 913 aa12.88□□□□□ -0.35
NSMCE1-211ENST00000566087 TAOK2Q9UL54 1235 aa12.88□□□□□ -0.35
NSMCE1-211ENST00000566087 KCNH4Q9UQ05 1017 aa12.88□□□□□ -0.35
NSMCE1-211ENST00000566087 SMARCA5O60264 1052 aaPredicted RBP12.87□□□□□ -0.35
NSMCE1-211ENST00000566087 GLRX3O76003 335 aaKnown RBP12.87□□□□□ -0.35
NSMCE1-211ENST00000566087 FARP2O94887 1054 aaPredicted RBP12.87□□□□□ -0.35
NSMCE1-211ENST00000566087 ZFYP08048 801 aaPredicted RBP12.87□□□□□ -0.35
NSMCE1-211ENST00000566087 GPAT2Q6NUI2 795 aa12.87□□□□□ -0.35
NSMCE1-211ENST00000566087 TTC6Q86TZ1 520 aa12.87□□□□□ -0.35
NSMCE1-211ENST00000566087 AMOTL1Q8IY63 956 aa12.87□□□□□ -0.35
NSMCE1-211ENST00000566087 CRACR2BQ8N4Y2 399 aaPredicted RBP12.87□□□□□ -0.35
NSMCE1-211ENST00000566087 SH3RF3Q8TEJ3 882 aaPredicted RBP12.87□□□□□ -0.35
NSMCE1-211ENST00000566087 ZNF384Q8TF68 577 aa12.87□□□□□ -0.35
NSMCE1-211ENST00000566087 U2AF1L4Q8WU68 220 aaKnown RBP12.87□□□□□ -0.35
NSMCE1-211ENST00000566087 TGFBRAP1Q8WUH2 860 aa12.87□□□□□ -0.35
NSMCE1-211ENST00000566087 HTATIP2Q9BUP3 242 aa12.87□□□□□ -0.35
NSMCE1-211ENST00000566087 TBC1D2Q9BYX2 928 aa12.87□□□□□ -0.35
NSMCE1-211ENST00000566087 OSBPL5Q9H0X9 879 aaPredicted RBP12.87□□□□□ -0.35
NSMCE1-211ENST00000566087 PRO3102Q9H379 93 aa12.87□□□□□ -0.35
NSMCE1-211ENST00000566087 COL2A1P02458 1487 aaPredicted RBP12.86□□□□□ -0.35
NSMCE1-211ENST00000566087 ATRNL1Q5VV63 1379 aa12.86□□□□□ -0.35
NSMCE1-211ENST00000566087 BCRP11274 1271 aa12.86□□□□□ -0.35
NSMCE1-211ENST00000566087 PDE6AP16499 860 aa12.86□□□□□ -0.35
NSMCE1-211ENST00000566087 FCGRTP55899 365 aa12.86□□□□□ -0.35
NSMCE1-211ENST00000566087 UBXN2AP68543 259 aa12.86□□□□□ -0.35
NSMCE1-211ENST00000566087 UBE3CQ15386 1083 aa12.86□□□□□ -0.35
NSMCE1-211ENST00000566087 NOL9Q5SY16 702 aaKnown RBP12.86□□□□□ -0.35
NSMCE1-211ENST00000566087 ZFPM1Q8IX07 1006 aa12.86□□□□□ -0.35
NSMCE1-211ENST00000566087 SMC5Q8IY18 1101 aa12.86□□□□□ -0.35
NSMCE1-211ENST00000566087 PARK7Q99497 189 aaKnown RBP12.86□□□□□ -0.35
NSMCE1-211ENST00000566087 ANTXR1Q9H6X2 564 aa12.86□□□□□ -0.35
NSMCE1-211ENST00000566087 GINM1Q9NU53 330 aa12.86□□□□□ -0.35
NSMCE1-211ENST00000566087 COL6A3P12111 3177 aa12.85□□□□□ -0.35
NSMCE1-211ENST00000566087 DDTLA6NHG4 134 aaPredicted RBP12.85□□□□□ -0.35
NSMCE1-211ENST00000566087 DLL1O00548 723 aa12.85□□□□□ -0.35
NSMCE1-211ENST00000566087 SOX1O00570 391 aaPredicted RBP12.85□□□□□ -0.35
NSMCE1-211ENST00000566087 ATXN8OSP0DMR3 200 aa12.85□□□□□ -0.35
NSMCE1-211ENST00000566087 SLURP2P0DP57 97 aa12.85□□□□□ -0.35
NSMCE1-211ENST00000566087 ELNP15502 786 aa12.85□□□□□ -0.35
NSMCE1-211ENST00000566087 TICAM2Q86XR7 235 aa12.85□□□□□ -0.35
NSMCE1-211ENST00000566087 MIGA1Q8NAN2 632 aa12.85□□□□□ -0.35
NSMCE1-211ENST00000566087 SLC17A8Q8NDX2 589 aa12.85□□□□□ -0.35
NSMCE1-211ENST00000566087 DDX4Q9NQI0 724 aaKnown RBP12.85□□□□□ -0.35
NSMCE1-211ENST00000566087 NR2E3Q9Y5X4 410 aa12.85□□□□□ -0.35
NSMCE1-211ENST00000566087 ZNF532Q9HCE3 1301 aa12.85□□□□□ -0.35
NSMCE1-211ENST00000566087 DOCK2Q92608 1830 aa12.84□□□□□ -0.35
NSMCE1-211ENST00000566087 CXCL11O14625 94 aa12.84□□□□□ -0.35
NSMCE1-211ENST00000566087 ADCY3O60266 1144 aa12.84□□□□□ -0.35
NSMCE1-211ENST00000566087 SGPL1O95470 568 aa12.84□□□□□ -0.35
NSMCE1-211ENST00000566087 INHAP05111 366 aa12.84□□□□□ -0.35
NSMCE1-211ENST00000566087 MX1P20591 662 aa12.84□□□□□ -0.35
NSMCE1-211ENST00000566087 FLT3LGP49771 235 aa12.84□□□□□ -0.35
NSMCE1-211ENST00000566087 GADL1Q6ZQY3 521 aa12.84□□□□□ -0.35
NSMCE1-211ENST00000566087 FASTKD5Q7L8L6 764 aaKnown RBP12.84□□□□□ -0.35
NSMCE1-211ENST00000566087 MAPKAPK5Q8IW41 473 aa12.84□□□□□ -0.35
NSMCE1-211ENST00000566087 SCYL3Q8IZE3 742 aa12.84□□□□□ -0.35
NSMCE1-211ENST00000566087 SLAIN1Q8ND83 568 aa12.84□□□□□ -0.35
NSMCE1-211ENST00000566087 LRCH3Q96II8 777 aa12.84□□□□□ -0.35
NSMCE1-211ENST00000566087 AS3MTQ9HBK9 375 aa12.84□□□□□ -0.35
NSMCE1-211ENST00000566087 ATP8A2Q9NTI2 1148 aa12.84□□□□□ -0.35
NSMCE1-211ENST00000566087 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.84□□□□□ -0.35
NSMCE1-211ENST00000566087 NDUFB9Q9Y6M9 179 aa12.84□□□□□ -0.35
NSMCE1-211ENST00000566087 ZHX2Q9Y6X8 837 aa12.84□□□□□ -0.35
NSMCE1-211ENST00000566087 LAMA3Q16787 3333 aa12.83□□□□□ -0.35
NSMCE1-211ENST00000566087 PHF20L1A8MW92 1017 aa12.83□□□□□ -0.36
NSMCE1-211ENST00000566087 EVI5O60447 810 aa12.83□□□□□ -0.36
NSMCE1-211ENST00000566087 TFRCP02786 760 aaKnown RBP12.83□□□□□ -0.36
NSMCE1-211ENST00000566087 POLR3DP05423 398 aaPredicted RBP12.83□□□□□ -0.36
NSMCE1-211ENST00000566087 ADD2P35612 726 aa12.83□□□□□ -0.36
NSMCE1-211ENST00000566087 ADGRA1Q86SQ6 560 aa12.83□□□□□ -0.36
NSMCE1-211ENST00000566087 KBTBD3Q8NAB2 608 aa12.83□□□□□ -0.36
NSMCE1-211ENST00000566087 DEFB118Q96PH6 123 aa12.83□□□□□ -0.36
NSMCE1-211ENST00000566087 STAP2Q9UGK3 403 aa12.83□□□□□ -0.36
NSMCE1-211ENST00000566087 ALPK3Q96L96 1907 aa12.83□□□□□ -0.36
NSMCE1-211ENST00000566087 MAST2Q6P0Q8 1798 aa12.83□□□□□ -0.36
NSMCE1-211ENST00000566087 FLT1P17948 1338 aa12.83□□□□□ -0.36
NSMCE1-211ENST00000566087 RFX7Q2KHR2 1363 aa12.82□□□□□ -0.36
NSMCE1-211ENST00000566087 ASNSP08243 561 aa12.82□□□□□ -0.36
NSMCE1-211ENST00000566087 GNAT2P19087 354 aa12.82□□□□□ -0.36
NSMCE1-211ENST00000566087 DYNLL1P63167 89 aaKnown RBP12.82□□□□□ -0.36
NSMCE1-211ENST00000566087 SH3BP5LQ7L8J4 393 aa12.82□□□□□ -0.36
NSMCE1-211ENST00000566087 CCDC84Q86UT8 332 aaPredicted RBP12.82□□□□□ -0.36
NSMCE1-211ENST00000566087 SERPINB13Q9UIV8 391 aa12.82□□□□□ -0.36
NSMCE1-211ENST00000566087 PALD1Q9ULE6 856 aa12.82□□□□□ -0.36
NSMCE1-211ENST00000566087 A0A0G2JLL6 359 aaPredicted RBP12.81□□□□□ -0.36
NSMCE1-211ENST00000566087 TNPO2O14787 897 aaKnown RBP12.81□□□□□ -0.36
NSMCE1-211ENST00000566087 RNF113AO15541 343 aaKnown RBP12.81□□□□□ -0.36
NSMCE1-211ENST00000566087 PTPRAP18433 802 aa12.81□□□□□ -0.36
NSMCE1-211ENST00000566087 CAP2P40123 477 aa12.81□□□□□ -0.36
NSMCE1-211ENST00000566087 NUCB1Q02818 461 aa12.81□□□□□ -0.36
NSMCE1-211ENST00000566087 PRRT2Q7Z6L0 340 aaPredicted RBP12.81□□□□□ -0.36
NSMCE1-211ENST00000566087 METTL16Q86W50 562 aaKnown RBP12.81□□□□□ -0.36
NSMCE1-211ENST00000566087 DIS3LQ8TF46 1054 aaKnown RBP12.81□□□□□ -0.36
NSMCE1-211ENST00000566087 EVI5LQ96CN4 794 aa12.81□□□□□ -0.36
NSMCE1-211ENST00000566087 RIOK1Q9BRS2 568 aaKnown RBP12.81□□□□□ -0.36
NSMCE1-211ENST00000566087 EHD4Q9H223 541 aa12.81□□□□□ -0.36
NSMCE1-211ENST00000566087 CABP5Q9NP86 173 aa12.81□□□□□ -0.36
NSMCE1-211ENST00000566087 MCM9Q9NXL9 1143 aa12.81□□□□□ -0.36
NSMCE1-211ENST00000566087 AFG3L2Q9Y4W6 797 aa12.81□□□□□ -0.36
NSMCE1-211ENST00000566087 PTPRFP10586 1907 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms