RNA–Protein interactions for RNA: ENST00000566086.1

EIF3C-208, Transcript of eukaryotic translation initiation factor 3 subunit C, humanhuman

TSL 2

Gene EIF3C, Length 424 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3C-208ENST00000566086 PAGR1Q9BTK6 254 aa12.62□□□□□ -0.39
EIF3C-208ENST00000566086 SNRKQ9NRH2 765 aa12.62□□□□□ -0.39
EIF3C-208ENST00000566086 AATFQ9NY61 560 aaKnown RBP eCLIP12.62□□□□□ -0.39
EIF3C-208ENST00000566086 RBPJLQ9UBG7 517 aa12.62□□□□□ -0.39
EIF3C-208ENST00000566086 AKAP2Q9Y2D5 859 aa12.62□□□□□ -0.39
EIF3C-208ENST00000566086 NDUFB9Q9Y6M9 179 aa12.62□□□□□ -0.39
EIF3C-208ENST00000566086 LDHCP07864 332 aa12.61□□□□□ -0.39
EIF3C-208ENST00000566086 COL6A1P12109 1028 aa12.61□□□□□ -0.39
EIF3C-208ENST00000566086 ZKSCAN1P17029 563 aaPredicted RBP12.61□□□□□ -0.39
EIF3C-208ENST00000566086 ARID4AP29374 1257 aaPredicted RBP12.61□□□□□ -0.39
EIF3C-208ENST00000566086 BACE1P56817 501 aa12.61□□□□□ -0.39
EIF3C-208ENST00000566086 GSTO1P78417 241 aa12.61□□□□□ -0.39
EIF3C-208ENST00000566086 LHX8Q68G74 356 aa12.61□□□□□ -0.39
EIF3C-208ENST00000566086 GPR153Q6NV75 609 aa12.61□□□□□ -0.39
EIF3C-208ENST00000566086 GPRC5AQ8NFJ5 357 aa12.61□□□□□ -0.39
EIF3C-208ENST00000566086 NUDT12Q9BQG2 462 aa12.61□□□□□ -0.39
EIF3C-208ENST00000566086 WDR18Q9BV38 432 aa12.61□□□□□ -0.39
EIF3C-208ENST00000566086 AS3MTQ9HBK9 375 aa12.61□□□□□ -0.39
EIF3C-208ENST00000566086 TMOD4Q9NZQ9 345 aa12.61□□□□□ -0.39
EIF3C-208ENST00000566086 HERC5Q9UII4 1024 aaKnown RBP12.61□□□□□ -0.39
EIF3C-208ENST00000566086 TNNQ9UQP3 1299 aa12.61□□□□□ -0.39
EIF3C-208ENST00000566086 STXBP5LQ9Y2K9 1186 aa12.61□□□□□ -0.39
EIF3C-208ENST00000566086 GPR142Q7Z601 462 aa12.6□□□□□ -0.39
EIF3C-208ENST00000566086 TGFBRAP1Q8WUH2 860 aa12.6□□□□□ -0.39
EIF3C-208ENST00000566086 USP6NLQ92738 828 aa12.6□□□□□ -0.39
EIF3C-208ENST00000566086 FAM161BQ96MY7 647 aa12.6□□□□□ -0.39
EIF3C-208ENST00000566086 TBC1D2Q9BYX2 928 aa12.6□□□□□ -0.39
EIF3C-208ENST00000566086 API5Q9BZZ5 524 aaKnown RBP12.6□□□□□ -0.39
EIF3C-208ENST00000566086 LRP2BPQ9P2M1 347 aa12.6□□□□□ -0.39
EIF3C-208ENST00000566086 SAP30BPQ9UHR5 308 aaKnown RBP12.6□□□□□ -0.39
EIF3C-208ENST00000566086 PALD1Q9ULE6 856 aa12.6□□□□□ -0.39
EIF3C-208ENST00000566086 RLFQ13129 1914 aa12.59□□□□□ -0.39
EIF3C-208ENST00000566086 USP17L10C9JJH3 530 aa12.59□□□□□ -0.39
EIF3C-208ENST00000566086 HOXA7P31268 230 aaPredicted RBP12.59□□□□□ -0.39
EIF3C-208ENST00000566086 ERVK-9P63128 1117 aa12.59□□□□□ -0.39
EIF3C-208ENST00000566086 ERVK-24P63145 666 aa12.59□□□□□ -0.39
EIF3C-208ENST00000566086 PDE3AQ14432 1141 aa12.59□□□□□ -0.39
EIF3C-208ENST00000566086 ZYXQ15942 572 aaKnown RBP12.59□□□□□ -0.39
EIF3C-208ENST00000566086 MORN1Q5T089 497 aa12.59□□□□□ -0.39
EIF3C-208ENST00000566086 CRACR2BQ8N4Y2 399 aaPredicted RBP12.59□□□□□ -0.39
EIF3C-208ENST00000566086 SOCS4Q8WXH5 440 aa12.59□□□□□ -0.39
EIF3C-208ENST00000566086 COL25A1Q9BXS0 654 aaPredicted RBP12.59□□□□□ -0.39
EIF3C-208ENST00000566086 EMILIN3Q9NT22 766 aa12.59□□□□□ -0.39
EIF3C-208ENST00000566086 FLRT1Q9NZU1 646 aa12.59□□□□□ -0.39
EIF3C-208ENST00000566086 PI4KBQ9UBF8 816 aa12.59□□□□□ -0.39
EIF3C-208ENST00000566086 ZBTB21Q9ULJ3 1066 aa12.59□□□□□ -0.39
EIF3C-208ENST00000566086 PRUNE2Q8WUY3 3088 aa12.59□□□□□ -0.39
EIF3C-208ENST00000566086 CDH23Q9H251 3354 aa12.59□□□□□ -0.39
EIF3C-208ENST00000566086 FLT1P17948 1338 aa12.59□□□□□ -0.39
EIF3C-208ENST00000566086 PNMA6EA0A0J9YXQ4 647 aa12.58□□□□□ -0.4
EIF3C-208ENST00000566086 ZNF316A6NFI3 1004 aaPredicted RBP12.58□□□□□ -0.4
EIF3C-208ENST00000566086 MAP4K4O95819 1239 aaPredicted RBP12.58□□□□□ -0.4
EIF3C-208ENST00000566086 ASNSP08243 561 aa12.58□□□□□ -0.4
EIF3C-208ENST00000566086 XRCC5P13010 732 aaKnown RBP12.58□□□□□ -0.4
EIF3C-208ENST00000566086 DYNLL1P63167 89 aaKnown RBP12.58□□□□□ -0.4
EIF3C-208ENST00000566086 MTX1Q13505 466 aa12.58□□□□□ -0.4
EIF3C-208ENST00000566086 NAA16Q6N069 864 aaPredicted RBP12.58□□□□□ -0.4
EIF3C-208ENST00000566086 TRMT2AQ8IZ69 625 aaKnown RBP12.58□□□□□ -0.4
EIF3C-208ENST00000566086 GUCD1Q96NT3 240 aa12.58□□□□□ -0.4
EIF3C-208ENST00000566086 NOL10Q9BSC4 688 aaKnown RBP12.58□□□□□ -0.4
EIF3C-208ENST00000566086 CNMDO75829 334 aa12.57□□□□□ -0.4
EIF3C-208ENST00000566086 MAPK4P31152 587 aa12.57□□□□□ -0.4
EIF3C-208ENST00000566086 RGS2P41220 211 aa12.57□□□□□ -0.4
EIF3C-208ENST00000566086 PLEKHH3Q7Z736 793 aa12.57□□□□□ -0.4
EIF3C-208ENST00000566086 CCAR1Q8IX12 1150 aaKnown RBP12.57□□□□□ -0.4
EIF3C-208ENST00000566086 TRIM34Q9BYJ4 488 aa12.57□□□□□ -0.4
EIF3C-208ENST00000566086 DHX36Q9H2U1 1008 aaKnown RBP12.57□□□□□ -0.4
EIF3C-208ENST00000566086 HDAC5Q9UQL6 1122 aa12.57□□□□□ -0.4
EIF3C-208ENST00000566086 NAV1Q8NEY1 1877 aa12.57□□□□□ -0.4
EIF3C-208ENST00000566086 C19orf81C9J6K1 198 aa12.56□□□□□ -0.4
EIF3C-208ENST00000566086 GH2P01242 217 aa12.56□□□□□ -0.4
EIF3C-208ENST00000566086 CYP2E1P05181 493 aaPredicted RBP12.56□□□□□ -0.4
EIF3C-208ENST00000566086 GNAI3P08754 354 aa12.56□□□□□ -0.4
EIF3C-208ENST00000566086 ATN1P54259 1190 aaPredicted RBP12.56□□□□□ -0.4
EIF3C-208ENST00000566086 WDR78Q5VTH9 848 aa12.56□□□□□ -0.4
EIF3C-208ENST00000566086 METTL16Q86W50 562 aaKnown RBP12.56□□□□□ -0.4
EIF3C-208ENST00000566086 APBA2Q99767 749 aa12.56□□□□□ -0.4
EIF3C-208ENST00000566086 DBNDD2Q9BQY9 259 aa12.56□□□□□ -0.4
EIF3C-208ENST00000566086 SENP6Q9GZR1 1112 aaPredicted RBP12.56□□□□□ -0.4
EIF3C-208ENST00000566086 CWC22Q9HCG8 908 aaKnown RBP12.56□□□□□ -0.4
EIF3C-208ENST00000566086 MYH8P13535 1937 aa12.56□□□□□ -0.4
EIF3C-208ENST00000566086 BAG3O95817 575 aa12.55□□□□□ -0.4
EIF3C-208ENST00000566086 UQCRFS1P1P0C7P4 283 aa12.55□□□□□ -0.4
EIF3C-208ENST00000566086 CNGA1P29973 690 aa12.55□□□□□ -0.4
EIF3C-208ENST00000566086 RARSP54136 660 aaKnown RBP12.55□□□□□ -0.4
EIF3C-208ENST00000566086 PPP4CP60510 307 aa12.55□□□□□ -0.4
EIF3C-208ENST00000566086 MAP2K5Q13163 448 aa12.55□□□□□ -0.4
EIF3C-208ENST00000566086 G3BP1Q13283 466 aaKnown RBP eCLIP12.55□□□□□ -0.4
EIF3C-208ENST00000566086 TTC39AQ5SRH9 613 aa12.55□□□□□ -0.4
EIF3C-208ENST00000566086 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.55□□□□□ -0.4
EIF3C-208ENST00000566086 TRMT44Q8IYL2 757 aaKnown RBP12.55□□□□□ -0.4
EIF3C-208ENST00000566086 PIH1D3Q9NQM4 214 aaKnown RBP12.55□□□□□ -0.4
EIF3C-208ENST00000566086 ZNFX1Q9P2E3 1918 aaKnown RBP12.54□□□□□ -0.4
EIF3C-208ENST00000566086 A0A0G2JMZ2 1700 aa12.54□□□□□ -0.4
EIF3C-208ENST00000566086 COL11A1P12107 1806 aaPredicted RBP12.54□□□□□ -0.4
EIF3C-208ENST00000566086 PARP14Q460N5 1801 aa12.54□□□□□ -0.4
EIF3C-208ENST00000566086 POTEB2H3BUK9 544 aa12.54□□□□□ -0.4
EIF3C-208ENST00000566086 CYP2C19P33261 490 aa12.54□□□□□ -0.4
EIF3C-208ENST00000566086 ZAP70P43403 619 aa12.54□□□□□ -0.4
EIF3C-208ENST00000566086 USP17L2Q6R6M4 530 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms