RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 TUBB2BQ9BVA1 445 aa11.86□□□□□ -0.51
USB1-212ENST00000566082 IRX2Q9BZI1 471 aaPredicted RBP11.86□□□□□ -0.51
USB1-212ENST00000566082 PUS7LQ9H0K6 701 aaKnown RBP11.86□□□□□ -0.51
USB1-212ENST00000566082 MAN1B1Q9UKM7 699 aa11.86□□□□□ -0.51
USB1-212ENST00000566082 USP42Q9H9J4 1324 aaKnown RBP11.86□□□□□ -0.51
USB1-212ENST00000566082 GOLGA6BA6NDN3 693 aa11.86□□□□□ -0.51
USB1-212ENST00000566082 NDUFAB1O14561 156 aa11.86□□□□□ -0.51
USB1-212ENST00000566082 JAKMIP2Q96AA8 810 aa11.86□□□□□ -0.51
USB1-212ENST00000566082 FAM204AQ9H8W3 233 aa11.86□□□□□ -0.51
USB1-212ENST00000566082 MROH2AA6NES4 1674 aa11.86□□□□□ -0.51
USB1-212ENST00000566082 PPP6R2O75170 966 aa11.86□□□□□ -0.51
USB1-212ENST00000566082 NR5A1Q13285 461 aa11.86□□□□□ -0.51
USB1-212ENST00000566082 KAT14Q9H8E8 782 aa11.86□□□□□ -0.51
USB1-212ENST00000566082 INO80Q9ULG1 1556 aaPredicted RBP11.86□□□□□ -0.51
USB1-212ENST00000566082 MYO1CO00159 1063 aa11.86□□□□□ -0.51
USB1-212ENST00000566082 KIF5BP33176 963 aa11.86□□□□□ -0.51
USB1-212ENST00000566082 PLCD1P51178 756 aa11.86□□□□□ -0.51
USB1-212ENST00000566082 ST5P78524 1137 aa11.86□□□□□ -0.51
USB1-212ENST00000566082 SPATA1Q5VX52 437 aa11.86□□□□□ -0.51
USB1-212ENST00000566082 EXOC4Q96A65 974 aa11.86□□□□□ -0.51
USB1-212ENST00000566082 SAR1BQ9Y6B6 198 aa11.86□□□□□ -0.51
USB1-212ENST00000566082 TADA3O75528 432 aa11.85□□□□□ -0.51
USB1-212ENST00000566082 RNASE9P60153 205 aaKnown RBP11.85□□□□□ -0.51
USB1-212ENST00000566082 IKQ13123 557 aaPredicted RBP11.85□□□□□ -0.51
USB1-212ENST00000566082 TSGA10IPQ3SY00 556 aa11.85□□□□□ -0.51
USB1-212ENST00000566082 TTC38Q5R3I4 469 aa11.85□□□□□ -0.51
USB1-212ENST00000566082 TSG101Q99816 390 aa11.85□□□□□ -0.51
USB1-212ENST00000566082 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.85□□□□□ -0.51
USB1-212ENST00000566082 MKRN1Q9UHC7 482 aaKnown RBP11.85□□□□□ -0.51
USB1-212ENST00000566082 VAV2P52735 878 aa11.85□□□□□ -0.51
USB1-212ENST00000566082 WHAMMP3Q1A5X7 153 aa11.85□□□□□ -0.51
USB1-212ENST00000566082 HEATR3Q7Z4Q2 680 aa11.85□□□□□ -0.51
USB1-212ENST00000566082 NELFBQ8WX92 580 aa11.85□□□□□ -0.51
USB1-212ENST00000566082 CALML4Q96GE6 196 aa11.85□□□□□ -0.51
USB1-212ENST00000566082 GOPCQ9HD26 462 aa11.85□□□□□ -0.51
USB1-212ENST00000566082 ABCB6Q9NP58 842 aa11.85□□□□□ -0.51
USB1-212ENST00000566082 DTHD1Q6ZMT9 781 aa11.85□□□□□ -0.51
USB1-212ENST00000566082 CSRNP2Q9H175 543 aa11.85□□□□□ -0.51
USB1-212ENST00000566082 ALDH8A1Q9H2A2 487 aaPredicted RBP11.85□□□□□ -0.51
USB1-212ENST00000566082 A2ML1A8K2U0 1454 aa11.84□□□□□ -0.51
USB1-212ENST00000566082 A0A0G2JLW4 131 aa11.84□□□□□ -0.51
USB1-212ENST00000566082 FOXN1O15353 648 aa11.84□□□□□ -0.51
USB1-212ENST00000566082 FGFR1OPO95684 399 aaKnown RBP11.84□□□□□ -0.51
USB1-212ENST00000566082 CYP2C19P33261 490 aa11.84□□□□□ -0.51
USB1-212ENST00000566082 AKNAD1Q5T1N1 836 aa11.84□□□□□ -0.51
USB1-212ENST00000566082 CFAP58Q5T655 872 aa11.84□□□□□ -0.51
USB1-212ENST00000566082 SEC63Q9UGP8 760 aaKnown RBP11.84□□□□□ -0.51
USB1-212ENST00000566082 PHKG2P15735 406 aa11.84□□□□□ -0.51
USB1-212ENST00000566082 AMPD3Q01432 767 aa11.84□□□□□ -0.51
USB1-212ENST00000566082 TRIM14Q14142 442 aa11.84□□□□□ -0.51
USB1-212ENST00000566082 MTF1Q14872 753 aa11.84□□□□□ -0.51
USB1-212ENST00000566082 DZIP1Q86YF9 867 aaKnown RBP11.84□□□□□ -0.51
USB1-212ENST00000566082 ZNF444Q8N0Y2 327 aaPredicted RBP11.84□□□□□ -0.51
USB1-212ENST00000566082 CSGALNACT2Q8N6G5 542 aa11.84□□□□□ -0.51
USB1-212ENST00000566082 KIF28PB7ZC32 967 aa11.84□□□□□ -0.51
USB1-212ENST00000566082 PDE6AP16499 860 aa11.84□□□□□ -0.51
USB1-212ENST00000566082 CASP1P29466 404 aa11.84□□□□□ -0.51
USB1-212ENST00000566082 LIG3P49916 1009 aa11.84□□□□□ -0.51
USB1-212ENST00000566082 PRPF4BQ13523 1007 aaKnown RBP11.84□□□□□ -0.51
USB1-212ENST00000566082 ZNF654Q8IZM8 581 aa11.84□□□□□ -0.51
USB1-212ENST00000566082 TRIML1Q8N9V2 468 aa11.84□□□□□ -0.51
USB1-212ENST00000566082 OR8K1Q8NGG5 319 aa11.84□□□□□ -0.51
USB1-212ENST00000566082 UBA5Q9GZZ9 404 aa11.84□□□□□ -0.51
USB1-212ENST00000566082 MAP2P11137 1827 aaKnown RBP11.83□□□□□ -0.52
USB1-212ENST00000566082 MAGEB6P1A0A0J9YX57 407 aa11.83□□□□□ -0.52
USB1-212ENST00000566082 CTDNEP1O95476 244 aa11.83□□□□□ -0.52
USB1-212ENST00000566082 INPP5BP32019 993 aa11.83□□□□□ -0.52
USB1-212ENST00000566082 COL9A3Q14050 684 aaPredicted RBP11.83□□□□□ -0.52
USB1-212ENST00000566082 FAM71BQ8TC56 605 aa11.83□□□□□ -0.52
USB1-212ENST00000566082 ENOX1Q8TC92 643 aaKnown RBP11.83□□□□□ -0.52
USB1-212ENST00000566082 NOC4LQ9BVI4 516 aaKnown RBP11.83□□□□□ -0.52
USB1-212ENST00000566082 RTL9Q8NET4 1388 aa11.83□□□□□ -0.52
USB1-212ENST00000566082 CASP8Q14790 479 aa11.83□□□□□ -0.52
USB1-212ENST00000566082 ZFYVE27Q5T4F4 411 aa11.83□□□□□ -0.52
USB1-212ENST00000566082 TTC19Q6DKK2 380 aaPredicted RBP11.83□□□□□ -0.52
USB1-212ENST00000566082 NCAPH2Q6IBW4 605 aa11.83□□□□□ -0.52
USB1-212ENST00000566082 CEP57Q86XR8 500 aa11.83□□□□□ -0.52
USB1-212ENST00000566082 ENGASEQ8NFI3 743 aa11.83□□□□□ -0.52
USB1-212ENST00000566082 EPN1Q9Y6I3 576 aaPredicted RBP11.83□□□□□ -0.52
USB1-212ENST00000566082 MED23Q9ULK4 1368 aa11.83□□□□□ -0.52
USB1-212ENST00000566082 KCNJ18B7U540 433 aa11.83□□□□□ -0.52
USB1-212ENST00000566082 GNAT2P19087 354 aa11.83□□□□□ -0.52
USB1-212ENST00000566082 HPDP32754 393 aaPredicted RBP11.83□□□□□ -0.52
USB1-212ENST00000566082 PDE4BQ07343 736 aa11.83□□□□□ -0.52
USB1-212ENST00000566082 KCNJ12Q14500 433 aa11.83□□□□□ -0.52
USB1-212ENST00000566082 TCERG1LQ5VWI1 586 aa11.83□□□□□ -0.52
USB1-212ENST00000566082 RBM43Q6ZSC3 357 aaKnown RBP11.83□□□□□ -0.52
USB1-212ENST00000566082 LRRN4CLQ8ND94 238 aa11.83□□□□□ -0.52
USB1-212ENST00000566082 BPIFA3Q9BQP9 254 aa11.83□□□□□ -0.52
USB1-212ENST00000566082 ZNF609O15014 1411 aa11.82□□□□□ -0.52
USB1-212ENST00000566082 MORC3Q14149 939 aa11.82□□□□□ -0.52
USB1-212ENST00000566082 USPL1Q5W0Q7 1092 aa11.82□□□□□ -0.52
USB1-212ENST00000566082 C8orf74Q6P047 294 aa11.82□□□□□ -0.52
USB1-212ENST00000566082 SHC4Q6S5L8 630 aa11.82□□□□□ -0.52
USB1-212ENST00000566082 IFNL3Q8IZI9 196 aa11.82□□□□□ -0.52
USB1-212ENST00000566082 BCAS4Q8TDM0 211 aa11.82□□□□□ -0.52
USB1-212ENST00000566082 SYMPKQ92797 1274 aaKnown RBP11.82□□□□□ -0.52
USB1-212ENST00000566082 CCDC51Q96ER9 411 aa11.82□□□□□ -0.52
USB1-212ENST00000566082 PLCD4Q9BRC7 762 aa11.82□□□□□ -0.52
USB1-212ENST00000566082 PCDHB6Q9Y5E3 794 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms