RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 CCDC50Q8IVM0 306 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.27□□□□□ -1.89
CHD9-218ENST00000566029 IWS1Q96ST2 819 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 TANGO6Q9C0B7 1094 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 SHPRHQ149N8 1683 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 KIAA0556O60303 1618 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 GOLGA6CA6NDK9 693 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 GOLGA6BA6NDN3 693 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 PDLIM1O00151 329 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 LIN7AO14910 233 aaPredicted RBP3.27□□□□□ -1.89
CHD9-218ENST00000566029 GOLGA6DP0CG33 693 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 TOP1P11387 765 aaKnown RBP3.27□□□□□ -1.89
CHD9-218ENST00000566029 ZNF18P17022 549 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 PSMA5P28066 241 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 CASP2P42575 452 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 PDE4BQ07343 736 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 ARL8AQ96BM9 186 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 DESI2Q9BSY9 194 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 GOLGA6AQ9NYA3 693 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 G3BP2Q9UN86 482 aaKnown RBP3.27□□□□□ -1.89
CHD9-218ENST00000566029 RABGAP1Q9Y3P9 1069 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 NMIQ13287 307 aaPredicted RBP3.27□□□□□ -1.89
CHD9-218ENST00000566029 TCP11Q8WWU5 503 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 SPG7Q9UQ90 795 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 VWDEQ8N2E2 1590 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 STIM1Q13586 685 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 FAM133BQ5BKY9 247 aaKnown RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 TTMPQ5BVD1 217 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 ZNF396Q96N95 335 aaPredicted RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 NDST4Q9H3R1 872 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 A0A1W2PP64 1363 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 MED23Q9ULK4 1368 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 NR1I2O75469 434 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 YEATS4O95619 227 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 PDHBP11177 359 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 ABCD1P33897 745 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 COPB2P35606 906 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 APLFQ8IW19 511 aaPredicted RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 RPUSD2Q8IZ73 545 aaKnown RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 DDX54Q8TDD1 881 aaKnown RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 PCDHA7Q9UN72 937 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 TULP4Q9NRJ4 1543 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 SMIM23A6NLE4 172 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 PDE2AO00408 941 aaPredicted RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 TFRCP02786 760 aaKnown RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 MAGEA8P43361 318 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 APBA1Q02410 837 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 SNX1Q13596 522 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 BYSLQ13895 437 aaKnown RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 DCTN1Q14203 1278 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 SNCBQ16143 134 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 SND1Q7KZF4 910 aaKnown RBP eCLIP3.26□□□□□ -1.89
CHD9-218ENST00000566029 MORC4Q8TE76 937 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 ZMAT2Q96NC0 199 aaKnown RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 PUF60Q9UHX1 559 aaKnown RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 TBC1D2BQ9UPU7 963 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 MRPL11Q9Y3B7 192 aaKnown RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 ADAMTS12P58397 1594 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 MFAP3LO75121 409 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 PSMD2Q13200 908 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 RILPL2Q969X0 211 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 ZBTB10Q96DT7 871 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 CCDC51Q96ER9 411 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 EPN3Q9H201 632 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 KIF9Q9HAQ2 790 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 TTF2Q9UNY4 1162 aaKnown RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 A6NNZ2 444 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 TUBB8Q3ZCM7 444 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 ZNF570Q96NI8 536 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 LMCD1Q9NZU5 365 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 CROCC2H7BZ55 1655 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 GNAI2P04899 355 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 CD151P48509 253 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 PRR16Q569H4 304 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 CAPRIN2Q6IMN6 1127 aaKnown RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 MICALCLQ6ZW33 695 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 TBATAQ96M53 351 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 USP28Q96RU2 1077 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 MMS19Q96T76 1030 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 NUP58Q9BVL2 599 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 KDM6AO15550 1401 aaPredicted RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 PYGLP06737 847 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 RPS6KB1P23443 525 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 ABL2P42684 1182 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 ILF2Q12905 390 aaKnown RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 USPL1Q5W0Q7 1092 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 MSL1Q68DK7 614 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 FAM9CQ8IZT9 166 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 CCDC47Q96A33 483 aaKnown RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 ALS2CR12Q96Q35 445 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 FANCLQ9NW38 375 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 SAMM50Q9Y512 469 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 SH3TC1Q8TE82 1336 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 FERP16591 822 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 WASHC4Q2M389 1173 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 CMPK2Q5EBM0 449 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 CCDC70Q6NSX1 233 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 WHAMMQ8TF30 809 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 TBC1D5Q92609 795 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms