RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 HIBADHP31937 336 aaKnown RBP11.59□□□□□ -0.55
SMPD3-206ENST00000566009 GYG1P46976 350 aa11.59□□□□□ -0.55
SMPD3-206ENST00000566009 NFIAQ12857 509 aa11.59□□□□□ -0.55
SMPD3-206ENST00000566009 SPP2Q13103 211 aa11.59□□□□□ -0.55
SMPD3-206ENST00000566009 PHAXQ9H814 394 aaKnown RBP11.59□□□□□ -0.55
SMPD3-206ENST00000566009 RBPJLQ9UBG7 517 aa11.59□□□□□ -0.55
SMPD3-206ENST00000566009 LRRFIP2Q9Y608 721 aaKnown RBP11.59□□□□□ -0.55
SMPD3-206ENST00000566009 GBF1Q92538 1859 aa11.59□□□□□ -0.55
SMPD3-206ENST00000566009 MYH3P11055 1940 aa11.58□□□□□ -0.55
SMPD3-206ENST00000566009 ATRNL1Q5VV63 1379 aa11.58□□□□□ -0.56
SMPD3-206ENST00000566009 HSPA5P11021 654 aaKnown RBP11.58□□□□□ -0.56
SMPD3-206ENST00000566009 CYBAP13498 195 aa11.58□□□□□ -0.56
SMPD3-206ENST00000566009 IL9P15248 144 aa11.58□□□□□ -0.56
SMPD3-206ENST00000566009 HMGCS2P54868 508 aa11.58□□□□□ -0.56
SMPD3-206ENST00000566009 EPHA10Q5JZY3 1008 aa11.58□□□□□ -0.56
SMPD3-206ENST00000566009 ZFPM1Q8IX07 1006 aa11.58□□□□□ -0.56
SMPD3-206ENST00000566009 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.58□□□□□ -0.56
SMPD3-206ENST00000566009 FAM84BQ96KN1 310 aaPredicted RBP11.58□□□□□ -0.56
SMPD3-206ENST00000566009 TOX2Q96NM4 488 aa11.58□□□□□ -0.56
SMPD3-206ENST00000566009 CERS4Q9HA82 394 aa11.58□□□□□ -0.56
SMPD3-206ENST00000566009 PHF24Q9UPV7 400 aa11.58□□□□□ -0.56
SMPD3-206ENST00000566009 EPG5Q9HCE0 2579 aa11.58□□□□□ -0.56
SMPD3-206ENST00000566009 CHD8Q9HCK8 2581 aa11.58□□□□□ -0.56
SMPD3-206ENST00000566009 EPOPA6NHQ4 379 aa11.57□□□□□ -0.56
SMPD3-206ENST00000566009 DCDC2CA8MYV0 355 aa11.57□□□□□ -0.56
SMPD3-206ENST00000566009 PLIN1O60240 522 aa11.57□□□□□ -0.56
SMPD3-206ENST00000566009 SLURP2P0DP57 97 aa11.57□□□□□ -0.56
SMPD3-206ENST00000566009 ERVK-9P63128 1117 aa11.57□□□□□ -0.56
SMPD3-206ENST00000566009 ERVK-24P63145 666 aa11.57□□□□□ -0.56
SMPD3-206ENST00000566009 IRX3P78415 501 aaPredicted RBP11.57□□□□□ -0.56
SMPD3-206ENST00000566009 CHAF1AQ13111 956 aaPredicted RBP11.57□□□□□ -0.56
SMPD3-206ENST00000566009 HHIPL2Q6UWX4 724 aa11.57□□□□□ -0.56
SMPD3-206ENST00000566009 ASCL5Q7RTU5 278 aa11.57□□□□□ -0.56
SMPD3-206ENST00000566009 ANKRD33Q7Z3H0 272 aa11.57□□□□□ -0.56
SMPD3-206ENST00000566009 TMEM199Q8N511 208 aa11.57□□□□□ -0.56
SMPD3-206ENST00000566009 PLEKHF1Q96S99 279 aa11.57□□□□□ -0.56
SMPD3-206ENST00000566009 MTIF3Q9H2K0 278 aaKnown RBP11.57□□□□□ -0.56
SMPD3-206ENST00000566009 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.57□□□□□ -0.56
SMPD3-206ENST00000566009 FAM198AQ9UFP1 575 aa11.57□□□□□ -0.56
SMPD3-206ENST00000566009 TBX21Q9UL17 535 aa11.57□□□□□ -0.56
SMPD3-206ENST00000566009 PCDHA11Q9Y5I1 949 aa11.57□□□□□ -0.56
SMPD3-206ENST00000566009 SEPT4O43236 478 aa11.56□□□□□ -0.56
SMPD3-206ENST00000566009 CSF1RP07333 972 aa11.56□□□□□ -0.56
SMPD3-206ENST00000566009 HERVK_113P62684 666 aa11.56□□□□□ -0.56
SMPD3-206ENST00000566009 MAP3K10Q02779 954 aa11.56□□□□□ -0.56
SMPD3-206ENST00000566009 LEXMQ3ZCV2 418 aa11.56□□□□□ -0.56
SMPD3-206ENST00000566009 CDC42EP5Q6NZY7 148 aa11.56□□□□□ -0.56
SMPD3-206ENST00000566009 ZNF280CQ8ND82 737 aa11.56□□□□□ -0.56
SMPD3-206ENST00000566009 NPLOC4Q8TAT6 608 aa11.56□□□□□ -0.56
SMPD3-206ENST00000566009 TBC1D22AQ8WUA7 517 aa11.56□□□□□ -0.56
SMPD3-206ENST00000566009 ATOH1Q92858 354 aaPredicted RBP11.56□□□□□ -0.56
SMPD3-206ENST00000566009 CWC22Q9HCG8 908 aaKnown RBP11.56□□□□□ -0.56
SMPD3-206ENST00000566009 TRPC6Q9Y210 931 aa11.56□□□□□ -0.56
SMPD3-206ENST00000566009 NDUFB9Q9Y6M9 179 aa11.56□□□□□ -0.56
SMPD3-206ENST00000566009 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.55□□□□□ -0.56
SMPD3-206ENST00000566009 ANKRD18BA2A2Z9 1011 aa11.55□□□□□ -0.56
SMPD3-206ENST00000566009 SOWAHBA6NEL2 793 aa11.55□□□□□ -0.56
SMPD3-206ENST00000566009 APBB1O00213 710 aa11.55□□□□□ -0.56
SMPD3-206ENST00000566009 IGHA2P01877 340 aa11.55□□□□□ -0.56
SMPD3-206ENST00000566009 FGBP02675 491 aa11.55□□□□□ -0.56
SMPD3-206ENST00000566009 IGKV5-2P06315 115 aa11.55□□□□□ -0.56
SMPD3-206ENST00000566009 HOXB7P09629 217 aa11.55□□□□□ -0.56
SMPD3-206ENST00000566009 HOXC6P09630 235 aa11.55□□□□□ -0.56
SMPD3-206ENST00000566009 SH3D19Q5HYK7 790 aa11.55□□□□□ -0.56
SMPD3-206ENST00000566009 BMP8AQ7Z5Y6 402 aa11.55□□□□□ -0.56
SMPD3-206ENST00000566009 UBE2ZQ9H832 354 aaPredicted RBP11.55□□□□□ -0.56
SMPD3-206ENST00000566009 IQSEC3Q9UPP2 1182 aaPredicted RBP11.55□□□□□ -0.56
SMPD3-206ENST00000566009 LOC285556D6RIA3 1793 aa11.54□□□□□ -0.56
SMPD3-206ENST00000566009 A0A1W2PQ45 241 aaPredicted RBP11.54□□□□□ -0.56
SMPD3-206ENST00000566009 A0A1W2PQY0 241 aa11.54□□□□□ -0.56
SMPD3-206ENST00000566009 PROB1E7EW31 1015 aa11.54□□□□□ -0.56
SMPD3-206ENST00000566009 H7C1W4 665 aa11.54□□□□□ -0.56
SMPD3-206ENST00000566009 GLRX3O76003 335 aaKnown RBP11.54□□□□□ -0.56
SMPD3-206ENST00000566009 HOXA7P31268 230 aaPredicted RBP11.54□□□□□ -0.56
SMPD3-206ENST00000566009 FAM47AQ5JRC9 791 aa11.54□□□□□ -0.56
SMPD3-206ENST00000566009 PTCRAQ6ISU1 281 aaPredicted RBP11.54□□□□□ -0.56
SMPD3-206ENST00000566009 OTOP2Q7RTS6 562 aa11.54□□□□□ -0.56
SMPD3-206ENST00000566009 UBE3BQ7Z3V4 1068 aa11.54□□□□□ -0.56
SMPD3-206ENST00000566009 PLA2G12BQ9BX93 195 aa11.54□□□□□ -0.56
SMPD3-206ENST00000566009 IRF2BPLQ9H1B7 796 aa11.54□□□□□ -0.56
SMPD3-206ENST00000566009 ALG13Q9NP73 1137 aaKnown RBP11.54□□□□□ -0.56
SMPD3-206ENST00000566009 IL23AQ9NPF7 189 aa11.54□□□□□ -0.56
SMPD3-206ENST00000566009 MAST3O60307 1309 aa11.54□□□□□ -0.56
SMPD3-206ENST00000566009 DOCK1Q14185 1865 aa11.53□□□□□ -0.56
SMPD3-206ENST00000566009 GRXCR2A6NFK2 248 aa11.53□□□□□ -0.56
SMPD3-206ENST00000566009 SLC15A5A6NIM6 579 aa11.53□□□□□ -0.56
SMPD3-206ENST00000566009 CHL1O00533 1208 aa11.53□□□□□ -0.56
SMPD3-206ENST00000566009 SLC4A2P04920 1241 aa11.53□□□□□ -0.56
SMPD3-206ENST00000566009 PTPREP23469 700 aa11.53□□□□□ -0.56
SMPD3-206ENST00000566009 GRB10Q13322 594 aa11.53□□□□□ -0.56
SMPD3-206ENST00000566009 PKN1Q16512 942 aa11.53□□□□□ -0.56
SMPD3-206ENST00000566009 ARNTL2Q8WYA1 636 aa11.53□□□□□ -0.56
SMPD3-206ENST00000566009 PAGR1Q9BTK6 254 aa11.53□□□□□ -0.56
SMPD3-206ENST00000566009 COL4A6Q14031 1691 aa11.52□□□□□ -0.56
SMPD3-206ENST00000566009 BRWD1Q9NSI6 2320 aa11.52□□□□□ -0.57
SMPD3-206ENST00000566009 CA3P07451 260 aa11.52□□□□□ -0.57
SMPD3-206ENST00000566009 KCNA5P22460 613 aa11.52□□□□□ -0.57
SMPD3-206ENST00000566009 SH3BP5LQ7L8J4 393 aa11.52□□□□□ -0.57
SMPD3-206ENST00000566009 PPP1R12CQ9BZL4 782 aa11.52□□□□□ -0.57
SMPD3-206ENST00000566009 MAP3K2Q9Y2U5 619 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms