RNA–Protein interactions for RNA: ENST00000565908.6

TCF4-230, Transcript of transcription factor 4, humanhuman

TSL 3

Gene TCF4, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-230ENST00000565908 CHGBP05060 677 aa28.96■■■□□ 2.23
TCF4-230ENST00000565908 HMGCS2P54868 508 aa28.96■■■□□ 2.23
TCF4-230ENST00000565908 CAP1Q01518 475 aa28.96■■■□□ 2.23
TCF4-230ENST00000565908 SH3D19Q5HYK7 790 aa28.96■■■□□ 2.23
TCF4-230ENST00000565908 OTUD7AQ8TE49 926 aaPredicted RBP28.96■■■□□ 2.23
TCF4-230ENST00000565908 MX1P20591 662 aa28.95■■■□□ 2.22
TCF4-230ENST00000565908 LRRFIP1Q32MZ4 808 aaKnown RBP28.95■■■□□ 2.22
TCF4-230ENST00000565908 CERKLQ49MI3 558 aaPredicted RBP28.95■■■□□ 2.22
TCF4-230ENST00000565908 PI4K2BQ8TCG2 481 aa28.95■■■□□ 2.22
TCF4-230ENST00000565908 PUS7LQ9H0K6 701 aaKnown RBP28.95■■■□□ 2.22
TCF4-230ENST00000565908 PNMA3Q9UL41 463 aa28.95■■■□□ 2.22
TCF4-230ENST00000565908 TAOK2Q9UL54 1235 aa28.95■■■□□ 2.22
TCF4-230ENST00000565908 PRKAB2O43741 272 aa28.94■■■□□ 2.22
TCF4-230ENST00000565908 GH2P01242 217 aa28.94■■■□□ 2.22
TCF4-230ENST00000565908 ZFYP08048 801 aaPredicted RBP28.94■■■□□ 2.22
TCF4-230ENST00000565908 BACE1P56817 501 aa28.94■■■□□ 2.22
TCF4-230ENST00000565908 GABPAQ06546 454 aa28.94■■■□□ 2.22
TCF4-230ENST00000565908 PABPC4Q13310 644 aaKnown RBP eCLIP28.94■■■□□ 2.22
TCF4-230ENST00000565908 SHROOM1Q2M3G4 852 aaPredicted RBP28.94■■■□□ 2.22
TCF4-230ENST00000565908 TREML2Q5T2D2 321 aa28.94■■■□□ 2.22
TCF4-230ENST00000565908 DDRGK1Q96HY6 314 aa28.94■■■□□ 2.22
TCF4-230ENST00000565908 RWDD1Q9H446 243 aaPredicted RBP28.94■■■□□ 2.22
TCF4-230ENST00000565908 SUPT16HQ9Y5B9 1047 aaKnown RBP28.94■■■□□ 2.22
TCF4-230ENST00000565908 ATAD5Q96QE3 1844 aa28.94■■■□□ 2.22
TCF4-230ENST00000565908 C19orf81C9J6K1 198 aa28.93■■■□□ 2.22
TCF4-230ENST00000565908 GNRH1P01148 92 aa28.93■■■□□ 2.22
TCF4-230ENST00000565908 BCRP11274 1271 aa28.93■■■□□ 2.22
TCF4-230ENST00000565908 MTMR2Q13614 643 aa28.93■■■□□ 2.22
TCF4-230ENST00000565908 EXOC6Q8TAG9 804 aa28.93■■■□□ 2.22
TCF4-230ENST00000565908 SMCR8Q8TEV9 937 aaPredicted RBP28.93■■■□□ 2.22
TCF4-230ENST00000565908 TMOD4Q9NZQ9 345 aa28.93■■■□□ 2.22
TCF4-230ENST00000565908 DDX60LQ5H9U9 1706 aaKnown RBP28.93■■■□□ 2.22
TCF4-230ENST00000565908 NAV1Q8NEY1 1877 aa28.92■■■□□ 2.22
TCF4-230ENST00000565908 USP17L10C9JJH3 530 aa28.92■■■□□ 2.22
TCF4-230ENST00000565908 RNF113AO15541 343 aaKnown RBP28.92■■■□□ 2.22
TCF4-230ENST00000565908 SHMT1P34896 483 aa28.92■■■□□ 2.22
TCF4-230ENST00000565908 ABCB5Q2M3G0 1257 aa28.92■■■□□ 2.22
TCF4-230ENST00000565908 AMOTL1Q8IY63 956 aa28.92■■■□□ 2.22
TCF4-230ENST00000565908 APPBP2Q92624 585 aa28.92■■■□□ 2.22
TCF4-230ENST00000565908 ARHGAP39Q9C0H5 1083 aa28.92■■■□□ 2.22
TCF4-230ENST00000565908 CABP5Q9NP86 173 aa28.92■■■□□ 2.22
TCF4-230ENST00000565908 SLC4A4Q9Y6R1 1079 aa28.92■■■□□ 2.22
TCF4-230ENST00000565908 PTPRFP10586 1907 aa28.92■■■□□ 2.22
TCF4-230ENST00000565908 SALL3Q9BXA9 1300 aa28.92■■■□□ 2.22
TCF4-230ENST00000565908 RGS19P49795 217 aa28.9■■■□□ 2.22
TCF4-230ENST00000565908 SWAP70Q9UH65 585 aa28.9■■■□□ 2.22
TCF4-230ENST00000565908 MYH7P12883 1935 aa28.89■■■□□ 2.22
TCF4-230ENST00000565908 CYP2D6P10635 497 aa28.89■■■□□ 2.22
TCF4-230ENST00000565908 OSBPP22059 807 aa28.89■■■□□ 2.22
TCF4-230ENST00000565908 PSMC4P43686 418 aa28.89■■■□□ 2.22
TCF4-230ENST00000565908 RAB3GAP1Q15042 981 aa28.89■■■□□ 2.22
TCF4-230ENST00000565908 STRBPQ96SI9 672 aaKnown RBP28.89■■■□□ 2.22
TCF4-230ENST00000565908 PRMT2P55345 433 aa28.88■■■□□ 2.21
TCF4-230ENST00000565908 EVX2Q03828 476 aa28.88■■■□□ 2.21
TCF4-230ENST00000565908 OSBP2Q969R2 916 aa28.88■■■□□ 2.21
TCF4-230ENST00000565908 USP17L12C9JPN9 530 aa28.87■■■□□ 2.21
TCF4-230ENST00000565908 USP17L21D6R901 530 aa28.87■■■□□ 2.21
TCF4-230ENST00000565908 FMNL1O95466 1100 aaPredicted RBP28.87■■■□□ 2.21
TCF4-230ENST00000565908 HOXD10P28358 340 aa28.87■■■□□ 2.21
TCF4-230ENST00000565908 SOX10P56693 466 aa28.87■■■□□ 2.21
TCF4-230ENST00000565908 C12orf60Q5U649 245 aa28.87■■■□□ 2.21
TCF4-230ENST00000565908 SMC5Q8IY18 1101 aa28.87■■■□□ 2.21
TCF4-230ENST00000565908 FSD1Q9BTV5 496 aa28.87■■■□□ 2.21
TCF4-230ENST00000565908 STAP2Q9UGK3 403 aa28.87■■■□□ 2.21
TCF4-230ENST00000565908 LOC285556D6RIA3 1793 aa28.87■■■□□ 2.21
TCF4-230ENST00000565908 USP17L2Q6R6M4 530 aa28.86■■■□□ 2.21
TCF4-230ENST00000565908 TRIM47Q96LD4 638 aa28.86■■■□□ 2.21
TCF4-230ENST00000565908 PTCH2Q9Y6C5 1203 aa28.86■■■□□ 2.21
TCF4-230ENST00000565908 ECM2O94769 699 aaPredicted RBP28.85■■■□□ 2.21
TCF4-230ENST00000565908 CTGFP29279 349 aa28.85■■■□□ 2.21
TCF4-230ENST00000565908 HOXA7P31268 230 aaPredicted RBP28.85■■■□□ 2.21
TCF4-230ENST00000565908 GCLCP48506 637 aaPredicted RBP28.85■■■□□ 2.21
TCF4-230ENST00000565908 PDE1AP54750 535 aa28.85■■■□□ 2.21
TCF4-230ENST00000565908 FCGRTP55899 365 aa28.85■■■□□ 2.21
TCF4-230ENST00000565908 GIMAP6Q6P9H5 292 aa28.85■■■□□ 2.21
TCF4-230ENST00000565908 DYNLL2Q96FJ2 89 aa28.85■■■□□ 2.21
TCF4-230ENST00000565908 FEZ1Q99689 392 aa28.85■■■□□ 2.21
TCF4-230ENST00000565908 ASCC2Q9H1I8 757 aaPredicted RBP28.85■■■□□ 2.21
TCF4-230ENST00000565908 ARPP21Q9UBL0 812 aaPredicted RBP28.85■■■□□ 2.21
TCF4-230ENST00000565908 GPAA1O43292 621 aa28.84■■■□□ 2.21
TCF4-230ENST00000565908 GNAT2P19087 354 aa28.84■■■□□ 2.21
TCF4-230ENST00000565908 USP14P54578 494 aa28.84■■■□□ 2.21
TCF4-230ENST00000565908 IRX3P78415 501 aaPredicted RBP28.84■■■□□ 2.21
TCF4-230ENST00000565908 CTR9Q6PD62 1173 aa28.84■■■□□ 2.21
TCF4-230ENST00000565908 SLC44A5Q8NCS7 719 aa28.84■■■□□ 2.21
TCF4-230ENST00000565908 ARMC5Q96C12 935 aa28.84■■■□□ 2.21
TCF4-230ENST00000565908 SRRDQ9UH36 339 aa28.84■■■□□ 2.21
TCF4-230ENST00000565908 CYP2D7A0A087X1C5 515 aa28.83■■■□□ 2.21
TCF4-230ENST00000565908 MPHOSPH10O00566 681 aaKnown RBP28.83■■■□□ 2.21
TCF4-230ENST00000565908 FAM110CQ1W6H9 321 aa28.83■■■□□ 2.21
TCF4-230ENST00000565908 ANKRD13CQ8N6S4 541 aa28.83■■■□□ 2.21
TCF4-230ENST00000565908 LNPKQ9C0E8 428 aa28.83■■■□□ 2.21
TCF4-230ENST00000565908 KIAA1683Q9H0B3 1180 aa28.83■■■□□ 2.21
TCF4-230ENST00000565908 EMILIN3Q9NT22 766 aa28.83■■■□□ 2.21
TCF4-230ENST00000565908 HTTP42858 3142 aa28.83■■■□□ 2.21
TCF4-230ENST00000565908 GSG1L2A8MUP6 293 aa28.82■■■□□ 2.2
TCF4-230ENST00000565908 IGHDP01880 384 aa28.82■■■□□ 2.2
TCF4-230ENST00000565908 GUCY1A2P33402 732 aa28.82■■■□□ 2.2
TCF4-230ENST00000565908 SEPT2Q15019 361 aa28.82■■■□□ 2.2
TCF4-230ENST00000565908 SLC9C1Q4G0N8 1177 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms