RNA–Protein interactions for RNA: ENST00000565626.1

NSMCE1-210, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 259 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-210ENST00000565626 HAUS7Q99871 368 aa13.27□□□□□ -0.29
NSMCE1-210ENST00000565626 WDR18Q9BV38 432 aa13.27□□□□□ -0.29
NSMCE1-210ENST00000565626 ARMT1Q9H993 441 aa13.27□□□□□ -0.29
NSMCE1-210ENST00000565626 PCDHB15Q9Y5E8 787 aa13.27□□□□□ -0.29
NSMCE1-210ENST00000565626 FOCADQ5VW36 1801 aa13.27□□□□□ -0.29
NSMCE1-210ENST00000565626 PRKAB2O43741 272 aa13.26□□□□□ -0.29
NSMCE1-210ENST00000565626 PEX10O60683 326 aa13.26□□□□□ -0.29
NSMCE1-210ENST00000565626 GNRH1P01148 92 aa13.26□□□□□ -0.29
NSMCE1-210ENST00000565626 GH2P01242 217 aa13.26□□□□□ -0.29
NSMCE1-210ENST00000565626 CYP2D6P10635 497 aa13.26□□□□□ -0.29
NSMCE1-210ENST00000565626 BACE1P56817 501 aa13.26□□□□□ -0.29
NSMCE1-210ENST00000565626 SH3D19Q5HYK7 790 aa13.26□□□□□ -0.29
NSMCE1-210ENST00000565626 TATDN1Q6P1N9 297 aa13.26□□□□□ -0.29
NSMCE1-210ENST00000565626 MYPNQ86TC9 1320 aa13.26□□□□□ -0.29
NSMCE1-210ENST00000565626 CERS3Q8IU89 383 aa13.26□□□□□ -0.29
NSMCE1-210ENST00000565626 DCTPP1Q9H773 170 aa13.26□□□□□ -0.29
NSMCE1-210ENST00000565626 AS3MTQ9HBK9 375 aa13.26□□□□□ -0.29
NSMCE1-210ENST00000565626 SERPINB13Q9UIV8 391 aa13.26□□□□□ -0.29
NSMCE1-210ENST00000565626 GABRQQ9UN88 632 aa13.26□□□□□ -0.29
NSMCE1-210ENST00000565626 ATAD5Q96QE3 1844 aa13.25□□□□□ -0.29
NSMCE1-210ENST00000565626 SMIM22K7EJ46 135 aa13.25□□□□□ -0.29
NSMCE1-210ENST00000565626 POLR3DP05423 398 aaPredicted RBP13.25□□□□□ -0.29
NSMCE1-210ENST00000565626 SHMT1P34896 483 aa13.25□□□□□ -0.29
NSMCE1-210ENST00000565626 ADD2P35612 726 aa13.25□□□□□ -0.29
NSMCE1-210ENST00000565626 FCGRTP55899 365 aa13.25□□□□□ -0.29
NSMCE1-210ENST00000565626 RRP1P56182 461 aaKnown RBP13.25□□□□□ -0.29
NSMCE1-210ENST00000565626 MTFR1Q15390 333 aa13.25□□□□□ -0.29
NSMCE1-210ENST00000565626 TMED8Q6PL24 325 aaPredicted RBP13.25□□□□□ -0.29
NSMCE1-210ENST00000565626 NBPF11Q86T75 865 aa13.25□□□□□ -0.29
NSMCE1-210ENST00000565626 RAET1EQ8TD07 263 aa13.25□□□□□ -0.29
NSMCE1-210ENST00000565626 TBC1D2Q9BYX2 928 aa13.25□□□□□ -0.29
NSMCE1-210ENST00000565626 CRNKL1Q9BZJ0 848 aaKnown RBP13.25□□□□□ -0.29
NSMCE1-210ENST00000565626 ASCC2Q9H1I8 757 aaPredicted RBP13.25□□□□□ -0.29
NSMCE1-210ENST00000565626 EHD4Q9H223 541 aa13.25□□□□□ -0.29
NSMCE1-210ENST00000565626 MBD4O95243 580 aa13.24□□□□□ -0.29
NSMCE1-210ENST00000565626 HOXD10P28358 340 aa13.24□□□□□ -0.29
NSMCE1-210ENST00000565626 PRMT2P55345 433 aa13.24□□□□□ -0.29
NSMCE1-210ENST00000565626 TTC6Q86TZ1 520 aa13.24□□□□□ -0.29
NSMCE1-210ENST00000565626 TMEM106CQ9BVX2 250 aa13.24□□□□□ -0.29
NSMCE1-210ENST00000565626 DCP1AQ9NPI6 582 aaPredicted RBP13.24□□□□□ -0.29
NSMCE1-210ENST00000565626 EMILIN3Q9NT22 766 aa13.24□□□□□ -0.29
NSMCE1-210ENST00000565626 MCM9Q9NXL9 1143 aa13.24□□□□□ -0.29
NSMCE1-210ENST00000565626 TMOD4Q9NZQ9 345 aa13.24□□□□□ -0.29
NSMCE1-210ENST00000565626 PNMA3Q9UL41 463 aa13.24□□□□□ -0.29
NSMCE1-210ENST00000565626 MYH1P12882 1939 aa13.23□□□□□ -0.29
NSMCE1-210ENST00000565626 CYP2D7A0A087X1C5 515 aa13.23□□□□□ -0.29
NSMCE1-210ENST00000565626 USP17L10C9JJH3 530 aa13.23□□□□□ -0.29
NSMCE1-210ENST00000565626 TNPO2O14787 897 aaKnown RBP13.23□□□□□ -0.29
NSMCE1-210ENST00000565626 GRK4P32298 578 aa13.23□□□□□ -0.29
NSMCE1-210ENST00000565626 FLT3LGP49771 235 aa13.23□□□□□ -0.29
NSMCE1-210ENST00000565626 GABPAQ06546 454 aa13.23□□□□□ -0.29
NSMCE1-210ENST00000565626 RAB3GAP1Q15042 981 aa13.23□□□□□ -0.29
NSMCE1-210ENST00000565626 ZYXQ15942 572 aaKnown RBP13.23□□□□□ -0.29
NSMCE1-210ENST00000565626 CERKLQ49MI3 558 aaPredicted RBP13.23□□□□□ -0.29
NSMCE1-210ENST00000565626 SLC44A5Q8NCS7 719 aa13.23□□□□□ -0.29
NSMCE1-210ENST00000565626 ACER1Q8TDN7 264 aa13.23□□□□□ -0.29
NSMCE1-210ENST00000565626 OTUD7AQ8TE49 926 aaPredicted RBP13.23□□□□□ -0.29
NSMCE1-210ENST00000565626 CRBNQ96SW2 442 aa13.23□□□□□ -0.29
NSMCE1-210ENST00000565626 P2RX7Q99572 595 aaKnown RBP13.23□□□□□ -0.29
NSMCE1-210ENST00000565626 ECHDC1Q9NTX5 307 aa13.23□□□□□ -0.29
NSMCE1-210ENST00000565626 LOC285556D6RIA3 1793 aa13.22□□□□□ -0.29
NSMCE1-210ENST00000565626 ELNP15502 786 aa13.22□□□□□ -0.29
NSMCE1-210ENST00000565626 GUCY1A2P33402 732 aa13.22□□□□□ -0.29
NSMCE1-210ENST00000565626 PABPC4Q13310 644 aaKnown RBP eCLIP13.22□□□□□ -0.29
NSMCE1-210ENST00000565626 FAM110CQ1W6H9 321 aa13.22□□□□□ -0.29
NSMCE1-210ENST00000565626 ABCB5Q2M3G0 1257 aa13.22□□□□□ -0.29
NSMCE1-210ENST00000565626 POTEEQ6S8J3 1075 aa13.22□□□□□ -0.29
NSMCE1-210ENST00000565626 DYNLL2Q96FJ2 89 aa13.22□□□□□ -0.29
NSMCE1-210ENST00000565626 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.22□□□□□ -0.29
NSMCE1-210ENST00000565626 PUS7LQ9H0K6 701 aaKnown RBP13.22□□□□□ -0.29
NSMCE1-210ENST00000565626 TXNRD2Q9NNW7 524 aa13.22□□□□□ -0.29
NSMCE1-210ENST00000565626 GINM1Q9NU53 330 aa13.22□□□□□ -0.29
NSMCE1-210ENST00000565626 C19orf81C9J6K1 198 aa13.21□□□□□ -0.29
NSMCE1-210ENST00000565626 HOXA7P31268 230 aaPredicted RBP13.21□□□□□ -0.29
NSMCE1-210ENST00000565626 GCLCP48506 637 aaPredicted RBP13.21□□□□□ -0.29
NSMCE1-210ENST00000565626 IRX3P78415 501 aaPredicted RBP13.21□□□□□ -0.29
NSMCE1-210ENST00000565626 SEPT2Q15019 361 aa13.21□□□□□ -0.29
NSMCE1-210ENST00000565626 FEZ1Q99689 392 aa13.21□□□□□ -0.29
NSMCE1-210ENST00000565626 BIN2Q9UBW5 565 aaPredicted RBP13.21□□□□□ -0.29
NSMCE1-210ENST00000565626 TAOK2Q9UL54 1235 aa13.21□□□□□ -0.29
NSMCE1-210ENST00000565626 CEP290O15078 2479 aa13.21□□□□□ -0.29
NSMCE1-210ENST00000565626 DDX60LQ5H9U9 1706 aaKnown RBP13.21□□□□□ -0.3
NSMCE1-210ENST00000565626 DOCK3Q8IZD9 2030 aa13.2□□□□□ -0.3
NSMCE1-210ENST00000565626 MPHOSPH10O00566 681 aaKnown RBP13.2□□□□□ -0.3
NSMCE1-210ENST00000565626 ADCY3O60266 1144 aa13.2□□□□□ -0.3
NSMCE1-210ENST00000565626 HERVK_113P62684 666 aa13.2□□□□□ -0.3
NSMCE1-210ENST00000565626 UBE3CQ15386 1083 aa13.2□□□□□ -0.3
NSMCE1-210ENST00000565626 USP17L2Q6R6M4 530 aa13.2□□□□□ -0.3
NSMCE1-210ENST00000565626 CLEC10AQ8IUN9 316 aa13.2□□□□□ -0.3
NSMCE1-210ENST00000565626 NAV1Q8NEY1 1877 aa13.2□□□□□ -0.3
NSMCE1-210ENST00000565626 USP17L12C9JPN9 530 aa13.19□□□□□ -0.3
NSMCE1-210ENST00000565626 USP17L21D6R901 530 aa13.19□□□□□ -0.3
NSMCE1-210ENST00000565626 CCL5P13501 91 aa13.19□□□□□ -0.3
NSMCE1-210ENST00000565626 SLAIN1Q8ND83 568 aa13.19□□□□□ -0.3
NSMCE1-210ENST00000565626 SHISA4Q96DD7 197 aa13.19□□□□□ -0.3
NSMCE1-210ENST00000565626 UNC93B1Q9H1C4 597 aa13.19□□□□□ -0.3
NSMCE1-210ENST00000565626 CABP5Q9NP86 173 aa13.19□□□□□ -0.3
NSMCE1-210ENST00000565626 ATP8A2Q9NTI2 1148 aa13.19□□□□□ -0.3
NSMCE1-210ENST00000565626 RBPJLQ9UBG7 517 aa13.19□□□□□ -0.3
NSMCE1-210ENST00000565626 MORF4L1Q9UBU8 362 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms