RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 TAF1CQ15572 869 aaPredicted RBP18.54■□□□□ 0.56
COMMD4-212ENST00000565517 ZNF280CQ8ND82 737 aa18.54■□□□□ 0.56
COMMD4-212ENST00000565517 WDR18Q9BV38 432 aa18.54■□□□□ 0.56
COMMD4-212ENST00000565517 AS3MTQ9HBK9 375 aa18.54■□□□□ 0.56
COMMD4-212ENST00000565517 ZMYM1Q5SVZ6 1142 aa18.53■□□□□ 0.56
COMMD4-212ENST00000565517 AMOTL1Q8IY63 956 aa18.53■□□□□ 0.56
COMMD4-212ENST00000565517 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.53■□□□□ 0.56
COMMD4-212ENST00000565517 TRIM75PA6NK02 468 aa18.52■□□□□ 0.56
COMMD4-212ENST00000565517 GPAA1O43292 621 aa18.52■□□□□ 0.56
COMMD4-212ENST00000565517 SHMT1P34896 483 aa18.52■□□□□ 0.56
COMMD4-212ENST00000565517 JAG1P78504 1218 aa18.52■□□□□ 0.56
COMMD4-212ENST00000565517 SPP2Q13103 211 aa18.52■□□□□ 0.56
COMMD4-212ENST00000565517 CERKLQ49MI3 558 aaPredicted RBP18.52■□□□□ 0.56
COMMD4-212ENST00000565517 C12orf60Q5U649 245 aa18.52■□□□□ 0.56
COMMD4-212ENST00000565517 GPAT2Q6NUI2 795 aa18.52■□□□□ 0.56
COMMD4-212ENST00000565517 SWAP70Q9UH65 585 aa18.52■□□□□ 0.56
COMMD4-212ENST00000565517 ZBTB21Q9ULJ3 1066 aa18.52■□□□□ 0.56
COMMD4-212ENST00000565517 SLC45A1Q9Y2W3 748 aa18.52■□□□□ 0.56
COMMD4-212ENST00000565517 LOC285556D6RIA3 1793 aa18.51■□□□□ 0.55
COMMD4-212ENST00000565517 GSG1L2A8MUP6 293 aa18.51■□□□□ 0.55
COMMD4-212ENST00000565517 USP17L12C9JPN9 530 aa18.51■□□□□ 0.55
COMMD4-212ENST00000565517 USP17L21D6R901 530 aa18.51■□□□□ 0.55
COMMD4-212ENST00000565517 PDHXO00330 501 aa18.51■□□□□ 0.55
COMMD4-212ENST00000565517 TLR2O60603 784 aa18.51■□□□□ 0.55
COMMD4-212ENST00000565517 GDF11O95390 407 aa18.51■□□□□ 0.55
COMMD4-212ENST00000565517 SH3D19Q5HYK7 790 aa18.51■□□□□ 0.55
COMMD4-212ENST00000565517 CCDC84Q86UT8 332 aaPredicted RBP18.51■□□□□ 0.55
COMMD4-212ENST00000565517 PROCA1Q8NCQ7 364 aaPredicted RBP18.51■□□□□ 0.55
COMMD4-212ENST00000565517 PATL2C9JE40 543 aaKnown RBP18.5■□□□□ 0.55
COMMD4-212ENST00000565517 M0R2C6 588 aa18.5■□□□□ 0.55
COMMD4-212ENST00000565517 GH2P01242 217 aa18.5■□□□□ 0.55
COMMD4-212ENST00000565517 CYP2D6P10635 497 aa18.5■□□□□ 0.55
COMMD4-212ENST00000565517 ABCB5Q2M3G0 1257 aa18.5■□□□□ 0.55
COMMD4-212ENST00000565517 SBK1Q52WX2 424 aa18.5■□□□□ 0.55
COMMD4-212ENST00000565517 CTR9Q6PD62 1173 aa18.5■□□□□ 0.55
COMMD4-212ENST00000565517 CTU1Q7Z7A3 348 aaKnown RBP18.5■□□□□ 0.55
COMMD4-212ENST00000565517 CABP5Q9NP86 173 aa18.5■□□□□ 0.55
COMMD4-212ENST00000565517 ARPP21Q9UBL0 812 aaPredicted RBP18.5■□□□□ 0.55
COMMD4-212ENST00000565517 C19orf81C9J6K1 198 aa18.49■□□□□ 0.55
COMMD4-212ENST00000565517 BACE1P56817 501 aa18.49■□□□□ 0.55
COMMD4-212ENST00000565517 SP3Q02447 781 aa18.49■□□□□ 0.55
COMMD4-212ENST00000565517 EVX2Q03828 476 aa18.49■□□□□ 0.55
COMMD4-212ENST00000565517 DGKZQ13574 1117 aa18.49■□□□□ 0.55
COMMD4-212ENST00000565517 GADL1Q6ZQY3 521 aa18.49■□□□□ 0.55
COMMD4-212ENST00000565517 SEC62Q99442 399 aaKnown RBP18.49■□□□□ 0.55
COMMD4-212ENST00000565517 AGTPBP1Q9UPW5 1226 aa18.49■□□□□ 0.55
COMMD4-212ENST00000565517 TRIM6-TRIM34B2RNG4 842 aa18.48■□□□□ 0.55
COMMD4-212ENST00000565517 PKN2Q16513 984 aaKnown RBP18.48■□□□□ 0.55
COMMD4-212ENST00000565517 SHROOM1Q2M3G4 852 aaPredicted RBP18.48■□□□□ 0.55
COMMD4-212ENST00000565517 IFFO2Q5TF58 517 aa18.48■□□□□ 0.55
COMMD4-212ENST00000565517 C16orf86Q6ZW13 317 aa18.48■□□□□ 0.55
COMMD4-212ENST00000565517 ERO1AQ96HE7 468 aa18.48■□□□□ 0.55
COMMD4-212ENST00000565517 PARK7Q99497 189 aaKnown RBP18.48■□□□□ 0.55
COMMD4-212ENST00000565517 MCOLN1Q9GZU1 580 aa18.48■□□□□ 0.55
COMMD4-212ENST00000565517 HELLSQ9NRZ9 838 aa18.48■□□□□ 0.55
COMMD4-212ENST00000565517 USP17L10C9JJH3 530 aa18.47■□□□□ 0.55
COMMD4-212ENST00000565517 CDK8P49336 464 aa18.47■□□□□ 0.55
COMMD4-212ENST00000565517 HMGCS2P54868 508 aa18.47■□□□□ 0.55
COMMD4-212ENST00000565517 C17orf99Q6UX52 265 aa18.47■□□□□ 0.55
COMMD4-212ENST00000565517 IFNL3Q8IZI9 196 aa18.47■□□□□ 0.55
COMMD4-212ENST00000565517 DYNLL2Q96FJ2 89 aa18.47■□□□□ 0.55
COMMD4-212ENST00000565517 CCDC17Q96LX7 622 aa18.47■□□□□ 0.55
COMMD4-212ENST00000565517 NACAP1Q9BZK3 213 aa18.47■□□□□ 0.55
COMMD4-212ENST00000565517 ADGRA2Q96PE1 1338 aa18.47■□□□□ 0.55
COMMD4-212ENST00000565517 CYP2D7A0A087X1C5 515 aa18.46■□□□□ 0.55
COMMD4-212ENST00000565517 APPP05067 770 aa18.46■□□□□ 0.55
COMMD4-212ENST00000565517 PABPC4Q13310 644 aaKnown RBP eCLIP18.46■□□□□ 0.55
COMMD4-212ENST00000565517 SLC44A5Q8NCS7 719 aa18.46■□□□□ 0.55
COMMD4-212ENST00000565517 RILPL2Q969X0 211 aa18.46■□□□□ 0.55
COMMD4-212ENST00000565517 EPB41L4AQ9HCS5 686 aaPredicted RBP18.46■□□□□ 0.55
COMMD4-212ENST00000565517 PDE4AP27815 886 aa18.45■□□□□ 0.54
COMMD4-212ENST00000565517 GUCY1A2P33402 732 aa18.45■□□□□ 0.54
COMMD4-212ENST00000565517 TDO2P48775 406 aa18.45■□□□□ 0.54
COMMD4-212ENST00000565517 MTMR2Q13614 643 aa18.45■□□□□ 0.54
COMMD4-212ENST00000565517 RAB3GAP1Q15042 981 aa18.45■□□□□ 0.54
COMMD4-212ENST00000565517 ARHGEF6Q15052 776 aa18.45■□□□□ 0.54
COMMD4-212ENST00000565517 MCMDC2Q4G0Z9 681 aa18.45■□□□□ 0.54
COMMD4-212ENST00000565517 TMEM179Q6ZVK1 233 aa18.45■□□□□ 0.54
COMMD4-212ENST00000565517 TMOD4Q9NZQ9 345 aa18.45■□□□□ 0.54
COMMD4-212ENST00000565517 PNMA3Q9UL41 463 aa18.45■□□□□ 0.54
COMMD4-212ENST00000565517 ROBO3Q96MS0 1386 aa18.44■□□□□ 0.54
COMMD4-212ENST00000565517 SMIM22K7EJ46 135 aa18.44■□□□□ 0.54
COMMD4-212ENST00000565517 TREML2Q5T2D2 321 aa18.44■□□□□ 0.54
COMMD4-212ENST00000565517 USP17L2Q6R6M4 530 aa18.44■□□□□ 0.54
COMMD4-212ENST00000565517 CD99L2Q8TCZ2 262 aa18.44■□□□□ 0.54
COMMD4-212ENST00000565517 ABHD8Q96I13 439 aa18.44■□□□□ 0.54
COMMD4-212ENST00000565517 KIAA1683Q9H0B3 1180 aa18.44■□□□□ 0.54
COMMD4-212ENST00000565517 MINDY4BA8MYZ0 360 aa18.43■□□□□ 0.54
COMMD4-212ENST00000565517 MPHOSPH10O00566 681 aaKnown RBP18.43■□□□□ 0.54
COMMD4-212ENST00000565517 CYP2C8P10632 490 aa18.43■□□□□ 0.54
COMMD4-212ENST00000565517 SDSP20132 328 aa18.43■□□□□ 0.54
COMMD4-212ENST00000565517 HOXA7P31268 230 aaPredicted RBP18.43■□□□□ 0.54
COMMD4-212ENST00000565517 USP14P54578 494 aa18.43■□□□□ 0.54
COMMD4-212ENST00000565517 SEPT2Q15019 361 aa18.43■□□□□ 0.54
COMMD4-212ENST00000565517 C12orf42Q96LP6 360 aa18.43■□□□□ 0.54
COMMD4-212ENST00000565517 EMILIN3Q9NT22 766 aa18.43■□□□□ 0.54
COMMD4-212ENST00000565517 MGAMO43451 1857 aa18.42■□□□□ 0.54
COMMD4-212ENST00000565517 A0A0D9SFI3 127 aa18.42■□□□□ 0.54
COMMD4-212ENST00000565517 HIP1O00291 1037 aa18.42■□□□□ 0.54
COMMD4-212ENST00000565517 BCRP11274 1271 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms