RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 FGD1P98174 961 aa7.45□□□□□ -1.22
CHD9-215ENST00000565442 MAP1SQ66K74 1059 aaPredicted RBP7.45□□□□□ -1.22
CHD9-215ENST00000565442 GPBAR1Q8TDU6 330 aa7.45□□□□□ -1.22
CHD9-215ENST00000565442 EPS8L3Q8TE67 593 aaKnown RBP7.45□□□□□ -1.22
CHD9-215ENST00000565442 FOXQ1Q9C009 403 aa7.45□□□□□ -1.22
CHD9-215ENST00000565442 PRDM5Q9NQX1 630 aaPredicted RBP7.45□□□□□ -1.22
CHD9-215ENST00000565442 EOMESO95936 686 aa7.44□□□□□ -1.22
CHD9-215ENST00000565442 NTF4P34130 210 aa7.44□□□□□ -1.22
CHD9-215ENST00000565442 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.44□□□□□ -1.22
CHD9-215ENST00000565442 PPM1JQ5JR12 505 aa7.44□□□□□ -1.22
CHD9-215ENST00000565442 CIAPIN1Q6FI81 312 aa7.44□□□□□ -1.22
CHD9-215ENST00000565442 ATG14Q6ZNE5 492 aa7.44□□□□□ -1.22
CHD9-215ENST00000565442 UBE3DQ7Z6J8 389 aa7.44□□□□□ -1.22
CHD9-215ENST00000565442 FBF1Q8TES7 1133 aa7.44□□□□□ -1.22
CHD9-215ENST00000565442 ATP13A1Q9HD20 1204 aa7.44□□□□□ -1.22
CHD9-215ENST00000565442 MAPK8IP1Q9UQF2 711 aa7.44□□□□□ -1.22
CHD9-215ENST00000565442 MED14OSP0DP75 135 aa7.43□□□□□ -1.22
CHD9-215ENST00000565442 ARNTP27540 789 aa7.43□□□□□ -1.22
CHD9-215ENST00000565442 FCGRTP55899 365 aa7.43□□□□□ -1.22
CHD9-215ENST00000565442 PSMD2Q13200 908 aa7.43□□□□□ -1.22
CHD9-215ENST00000565442 ACSBG1Q96GR2 724 aa7.43□□□□□ -1.22
CHD9-215ENST00000565442 KRTAP17-1Q9BYP8 105 aa7.43□□□□□ -1.22
CHD9-215ENST00000565442 BCL11AQ9H165 835 aa7.43□□□□□ -1.22
CHD9-215ENST00000565442 EPB41L4BQ9H329 900 aa7.43□□□□□ -1.22
CHD9-215ENST00000565442 MRS2Q9HD23 443 aa7.43□□□□□ -1.22
CHD9-215ENST00000565442 DCP1AQ9NPI6 582 aaPredicted RBP7.43□□□□□ -1.22
CHD9-215ENST00000565442 SEMA3GQ9NS98 782 aa7.43□□□□□ -1.22
CHD9-215ENST00000565442 TCAF2A6NFQ2 919 aa7.42□□□□□ -1.22
CHD9-215ENST00000565442 DAB2P98082 770 aa7.42□□□□□ -1.22
CHD9-215ENST00000565442 HSPA12BQ96MM6 686 aa7.42□□□□□ -1.22
CHD9-215ENST00000565442 EMILIN2Q9BXX0 1053 aa7.42□□□□□ -1.22
CHD9-215ENST00000565442 NLRP2Q9NX02 1062 aa7.42□□□□□ -1.22
CHD9-215ENST00000565442 CSADQ9Y600 493 aa7.42□□□□□ -1.22
CHD9-215ENST00000565442 NME2P22392 152 aa7.41□□□□□ -1.22
CHD9-215ENST00000565442 GNA15P30679 374 aa7.41□□□□□ -1.22
CHD9-215ENST00000565442 ZNF252P-AS1Q0IIN9 211 aa7.41□□□□□ -1.22
CHD9-215ENST00000565442 TMC4Q7Z404 712 aa7.41□□□□□ -1.22
CHD9-215ENST00000565442 CCDC120Q96HB5 630 aa7.41□□□□□ -1.22
CHD9-215ENST00000565442 KCNK12Q9HB15 430 aa7.41□□□□□ -1.22
CHD9-215ENST00000565442 PICK1Q9NRD5 415 aa7.41□□□□□ -1.22
CHD9-215ENST00000565442 CACNA2D2Q9NY47 1150 aa7.41□□□□□ -1.22
CHD9-215ENST00000565442 SPG7Q9UQ90 795 aa7.41□□□□□ -1.22
CHD9-215ENST00000565442 FAM155AB1AL88 458 aaPredicted RBP7.4□□□□□ -1.22
CHD9-215ENST00000565442 SORBS3O60504 671 aa7.4□□□□□ -1.22
CHD9-215ENST00000565442 GLDCP23378 1020 aa7.4□□□□□ -1.22
CHD9-215ENST00000565442 MRPL58Q14197 206 aaKnown RBP7.4□□□□□ -1.22
CHD9-215ENST00000565442 VTI1BQ9UEU0 232 aa7.4□□□□□ -1.22
CHD9-215ENST00000565442 FANCGO15287 622 aa7.39□□□□□ -1.23
CHD9-215ENST00000565442 XRCC5P13010 732 aaKnown RBP7.39□□□□□ -1.23
CHD9-215ENST00000565442 HOXA5P20719 270 aa7.39□□□□□ -1.23
CHD9-215ENST00000565442 TSNAXIP1Q2TAA8 658 aa7.39□□□□□ -1.23
CHD9-215ENST00000565442 ARMCX6Q7L4S7 300 aa7.39□□□□□ -1.23
CHD9-215ENST00000565442 MFSD4AQ8N468 514 aa7.39□□□□□ -1.23
CHD9-215ENST00000565442 BACH2Q9BYV9 841 aa7.39□□□□□ -1.23
CHD9-215ENST00000565442 OSBPL7Q9BZF2 842 aa7.39□□□□□ -1.23
CHD9-215ENST00000565442 CBX8Q9HC52 389 aa7.39□□□□□ -1.23
CHD9-215ENST00000565442 PPP4R2Q9NY27 417 aa7.39□□□□□ -1.23
CHD9-215ENST00000565442 SMG5Q9UPR3 1016 aaKnown RBP7.39□□□□□ -1.23
CHD9-215ENST00000565442 AK5Q9Y6K8 562 aa7.39□□□□□ -1.23
CHD9-215ENST00000565442 DCDC2CA8MYV0 355 aa7.38□□□□□ -1.23
CHD9-215ENST00000565442 PRR33A8MZF0 331 aa7.38□□□□□ -1.23
CHD9-215ENST00000565442 H3BS24 57 aa7.38□□□□□ -1.23
CHD9-215ENST00000565442 ETV2O00321 342 aaPredicted RBP7.38□□□□□ -1.23
CHD9-215ENST00000565442 NUAK1O60285 661 aa7.38□□□□□ -1.23
CHD9-215ENST00000565442 RECKO95980 971 aa7.38□□□□□ -1.23
CHD9-215ENST00000565442 LINC00310P59036 64 aa7.38□□□□□ -1.23
CHD9-215ENST00000565442 RING1Q06587 406 aa7.38□□□□□ -1.23
CHD9-215ENST00000565442 ZBTB37Q5TC79 503 aa7.38□□□□□ -1.23
CHD9-215ENST00000565442 CDKAL1Q5VV42 579 aa7.38□□□□□ -1.23
CHD9-215ENST00000565442 NXPE4Q6UWF7 544 aa7.38□□□□□ -1.23
CHD9-215ENST00000565442 C22orf34Q6ZV56 151 aa7.38□□□□□ -1.23
CHD9-215ENST00000565442 CDC37L1Q7L3B6 337 aa7.38□□□□□ -1.23
CHD9-215ENST00000565442 KCT2Q8NC54 265 aa7.38□□□□□ -1.23
CHD9-215ENST00000565442 ALPK1Q96QP1 1244 aa7.38□□□□□ -1.23
CHD9-215ENST00000565442 BCO2Q9BYV7 579 aa7.38□□□□□ -1.23
CHD9-215ENST00000565442 JAG2Q9Y219 1238 aa7.38□□□□□ -1.23
CHD9-215ENST00000565442 RAC2P15153 192 aa7.37□□□□□ -1.23
CHD9-215ENST00000565442 EIF4BP23588 611 aaKnown RBP7.37□□□□□ -1.23
CHD9-215ENST00000565442 VAMP1P23763 118 aa7.37□□□□□ -1.23
CHD9-215ENST00000565442 MPRIPQ6WCQ1 1025 aa7.37□□□□□ -1.23
CHD9-215ENST00000565442 C12orf40Q86WS4 652 aa7.37□□□□□ -1.23
CHD9-215ENST00000565442 ABHD4Q8TB40 342 aa7.37□□□□□ -1.23
CHD9-215ENST00000565442 C20orf173Q96LM9 149 aa7.37□□□□□ -1.23
CHD9-215ENST00000565442 FRMD6Q96NE9 622 aa7.37□□□□□ -1.23
CHD9-215ENST00000565442 C12orf49Q9H741 205 aa7.37□□□□□ -1.23
CHD9-215ENST00000565442 LRIG2O94898 1065 aa7.36□□□□□ -1.23
CHD9-215ENST00000565442 SLITRK5O94991 958 aa7.36□□□□□ -1.23
CHD9-215ENST00000565442 SFRP5Q5T4F7 317 aa7.36□□□□□ -1.23
CHD9-215ENST00000565442 SLC26A8Q96RN1 970 aa7.36□□□□□ -1.23
CHD9-215ENST00000565442 TPX2Q9ULW0 747 aaKnown RBP7.36□□□□□ -1.23
CHD9-215ENST00000565442 ST14Q9Y5Y6 855 aa7.36□□□□□ -1.23
CHD9-215ENST00000565442 GIPC1O14908 333 aa7.35□□□□□ -1.23
CHD9-215ENST00000565442 LDLRAD1Q5T700 205 aa7.35□□□□□ -1.23
CHD9-215ENST00000565442 KCNN1Q92952 543 aa7.35□□□□□ -1.23
CHD9-215ENST00000565442 RELTQ969Z4 430 aa7.35□□□□□ -1.23
CHD9-215ENST00000565442 SLAMF8Q9P0V8 285 aa7.35□□□□□ -1.23
CHD9-215ENST00000565442 AKAP2Q9Y2D5 859 aa7.35□□□□□ -1.23
CHD9-215ENST00000565442 CNTNAP4Q9C0A0 1308 aa7.34□□□□□ -1.23
CHD9-215ENST00000565442 TRIM37O94972 964 aa7.34□□□□□ -1.23
CHD9-215ENST00000565442 CTSHP09668 335 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms