RNA–Protein interactions for RNA: ENST00000565034.1

NIP7-206, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 3

Gene NIP7, Length 639 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-206ENST00000565034 NTRK3Q16288 839 aa17.1■□□□□ 0.33
NIP7-206ENST00000565034 KLHL40Q2TBA0 621 aa17.1■□□□□ 0.33
NIP7-206ENST00000565034 RSBN1LQ6PCB5 846 aaPredicted RBP17.1■□□□□ 0.33
NIP7-206ENST00000565034 FANCBQ8NB91 859 aa17.1■□□□□ 0.33
NIP7-206ENST00000565034 DYNLL2Q96FJ2 89 aa17.1■□□□□ 0.33
NIP7-206ENST00000565034 C8orf76Q96K31 380 aa17.1■□□□□ 0.33
NIP7-206ENST00000565034 OSBPL5Q9H0X9 879 aaPredicted RBP17.1■□□□□ 0.33
NIP7-206ENST00000565034 TAOK3Q9H2K8 898 aa17.1■□□□□ 0.33
NIP7-206ENST00000565034 FAM217BQ9NTX9 383 aaPredicted RBP17.1■□□□□ 0.33
NIP7-206ENST00000565034 ZNRF3Q9ULT6 936 aa17.1■□□□□ 0.33
NIP7-206ENST00000565034 COL4A5P29400 1685 aa17.1■□□□□ 0.33
NIP7-206ENST00000565034 FMNL1O95466 1100 aaPredicted RBP17.09■□□□□ 0.33
NIP7-206ENST00000565034 MBD3O95983 291 aa17.09■□□□□ 0.33
NIP7-206ENST00000565034 HLA-DOAP06340 250 aa17.09■□□□□ 0.33
NIP7-206ENST00000565034 TSPY3P0CV98 308 aa17.09■□□□□ 0.33
NIP7-206ENST00000565034 TSPY8P0CW00 308 aa17.09■□□□□ 0.33
NIP7-206ENST00000565034 RXRAP19793 462 aa17.09■□□□□ 0.33
NIP7-206ENST00000565034 RASA1P20936 1047 aa17.09■□□□□ 0.33
NIP7-206ENST00000565034 PTGER2P43116 358 aa17.09■□□□□ 0.33
NIP7-206ENST00000565034 CDK8P49336 464 aa17.09■□□□□ 0.33
NIP7-206ENST00000565034 KRT85P78386 507 aa17.09■□□□□ 0.33
NIP7-206ENST00000565034 PICALMQ13492 652 aa17.09■□□□□ 0.33
NIP7-206ENST00000565034 FAM47AQ5JRC9 791 aa17.09■□□□□ 0.33
NIP7-206ENST00000565034 TRIM22Q8IYM9 498 aa17.09■□□□□ 0.33
NIP7-206ENST00000565034 MYL10Q9BUA6 226 aa17.09■□□□□ 0.33
NIP7-206ENST00000565034 IDI2Q9BXS1 227 aa17.09■□□□□ 0.33
NIP7-206ENST00000565034 SWAP70Q9UH65 585 aa17.09■□□□□ 0.33
NIP7-206ENST00000565034 HDAC9Q9UKV0 1011 aa17.09■□□□□ 0.33
NIP7-206ENST00000565034 LTBP3Q9NS15 1303 aa17.09■□□□□ 0.33
NIP7-206ENST00000565034 COL2A1P02458 1487 aaPredicted RBP17.09■□□□□ 0.33
NIP7-206ENST00000565034 MYH6P13533 1939 aa17.08■□□□□ 0.33
NIP7-206ENST00000565034 PLIN4Q96Q06 1357 aa17.08■□□□□ 0.32
NIP7-206ENST00000565034 NCLP19338 710 aaKnown RBP17.08■□□□□ 0.32
NIP7-206ENST00000565034 SSRP1Q08945 709 aaKnown RBP17.08■□□□□ 0.32
NIP7-206ENST00000565034 SLC4A8Q2Y0W8 1093 aa17.08■□□□□ 0.32
NIP7-206ENST00000565034 ATL3Q6DD88 541 aa17.08■□□□□ 0.32
NIP7-206ENST00000565034 CCDC144CPQ8IYA2 1237 aa17.08■□□□□ 0.32
NIP7-206ENST00000565034 NEDD1Q8NHV4 660 aa17.08■□□□□ 0.32
NIP7-206ENST00000565034 NUP133Q8WUM0 1156 aa17.08■□□□□ 0.32
NIP7-206ENST00000565034 MAP3K14Q99558 947 aa17.08■□□□□ 0.32
NIP7-206ENST00000565034 EHD4Q9H223 541 aa17.08■□□□□ 0.32
NIP7-206ENST00000565034 DDX4Q9NQI0 724 aaKnown RBP17.08■□□□□ 0.32
NIP7-206ENST00000565034 DDX49Q9Y6V7 483 aaKnown RBP17.08■□□□□ 0.32
NIP7-206ENST00000565034 PSDA5PKW4 1024 aaPredicted RBP17.07■□□□□ 0.32
NIP7-206ENST00000565034 RBM5P52756 815 aaKnown RBP eCLIP17.07■□□□□ 0.32
NIP7-206ENST00000565034 DNM1Q05193 864 aaKnown RBP17.07■□□□□ 0.32
NIP7-206ENST00000565034 GABPAQ06546 454 aa17.07■□□□□ 0.32
NIP7-206ENST00000565034 TROAPQ12815 778 aa17.07■□□□□ 0.32
NIP7-206ENST00000565034 FERMT3Q86UX7 667 aa17.07■□□□□ 0.32
NIP7-206ENST00000565034 AGBL3Q8NEM8 1001 aa17.07■□□□□ 0.32
NIP7-206ENST00000565034 FBXO18Q8NFZ0 1043 aa17.07■□□□□ 0.32
NIP7-206ENST00000565034 GMLQ99445 158 aa17.07■□□□□ 0.32
NIP7-206ENST00000565034 ALG1Q9BT22 464 aa17.07■□□□□ 0.32
NIP7-206ENST00000565034 DHX36Q9H2U1 1008 aaKnown RBP17.07■□□□□ 0.32
NIP7-206ENST00000565034 KAT14Q9H8E8 782 aa17.07■□□□□ 0.32
NIP7-206ENST00000565034 PPP1R1BQ9UD71 204 aaPredicted RBP17.07■□□□□ 0.32
NIP7-206ENST00000565034 CNPY2Q9Y2B0 182 aa17.07■□□□□ 0.32
NIP7-206ENST00000565034 PSMD14O00487 310 aa17.06■□□□□ 0.32
NIP7-206ENST00000565034 MMP14P50281 582 aa17.06■□□□□ 0.32
NIP7-206ENST00000565034 GSE1Q14687 1217 aa17.06■□□□□ 0.32
NIP7-206ENST00000565034 CFAP100Q494V2 611 aa17.06■□□□□ 0.32
NIP7-206ENST00000565034 RCSD1Q6JBY9 416 aa17.06■□□□□ 0.32
NIP7-206ENST00000565034 SLC44A5Q8NCS7 719 aa17.06■□□□□ 0.32
NIP7-206ENST00000565034 CTCFLQ8NI51 663 aaPredicted RBP17.06■□□□□ 0.32
NIP7-206ENST00000565034 CHAMP1Q96JM3 812 aa17.06■□□□□ 0.32
NIP7-206ENST00000565034 RNF26Q9BY78 433 aaPredicted RBP17.06■□□□□ 0.32
NIP7-206ENST00000565034 SIPA1L1O43166 1804 aa17.05■□□□□ 0.32
NIP7-206ENST00000565034 ELP1O95163 1332 aa17.05■□□□□ 0.32
NIP7-206ENST00000565034 ENTPD3O75355 529 aa17.05■□□□□ 0.32
NIP7-206ENST00000565034 DEXIO95424 95 aa17.05■□□□□ 0.32
NIP7-206ENST00000565034 KIF5BP33176 963 aa17.05■□□□□ 0.32
NIP7-206ENST00000565034 TRIM29Q14134 588 aa17.05■□□□□ 0.32
NIP7-206ENST00000565034 FOXD4L6Q3SYB3 417 aaPredicted RBP17.05■□□□□ 0.32
NIP7-206ENST00000565034 FOXD4L3Q6VB84 417 aaPredicted RBP17.05■□□□□ 0.32
NIP7-206ENST00000565034 NBPF11Q86T75 865 aa17.05■□□□□ 0.32
NIP7-206ENST00000565034 USP48Q86UV5 1035 aa17.05■□□□□ 0.32
NIP7-206ENST00000565034 KLHL34Q8N239 644 aa17.05■□□□□ 0.32
NIP7-206ENST00000565034 CRACR2BQ8N4Y2 399 aaPredicted RBP17.05■□□□□ 0.32
NIP7-206ENST00000565034 OGFOD1Q8N543 542 aa17.05■□□□□ 0.32
NIP7-206ENST00000565034 JDP2Q8WYK2 163 aa17.05■□□□□ 0.32
NIP7-206ENST00000565034 SLC26A6Q9BXS9 759 aa17.05■□□□□ 0.32
NIP7-206ENST00000565034 SCAND2PQ9GZW5 306 aaPredicted RBP17.05■□□□□ 0.32
NIP7-206ENST00000565034 IL17RBQ9NRM6 502 aa17.05■□□□□ 0.32
NIP7-206ENST00000565034 SERPINB13Q9UIV8 391 aa17.05■□□□□ 0.32
NIP7-206ENST00000565034 CFAP45Q9UL16 551 aa17.05■□□□□ 0.32
NIP7-206ENST00000565034 GREB1LQ9C091 1923 aaPredicted RBP17.04■□□□□ 0.32
NIP7-206ENST00000565034 NFKBIEO00221 500 aa17.04■□□□□ 0.32
NIP7-206ENST00000565034 NMT2O60551 498 aa17.04■□□□□ 0.32
NIP7-206ENST00000565034 RAD17O75943 681 aa17.04■□□□□ 0.32
NIP7-206ENST00000565034 PPP4R3BQ5MIZ7 849 aa17.04■□□□□ 0.32
NIP7-206ENST00000565034 BRAPQ7Z569 592 aa17.04■□□□□ 0.32
NIP7-206ENST00000565034 PHKBQ93100 1093 aa17.04■□□□□ 0.32
NIP7-206ENST00000565034 ZNF396Q96N95 335 aaPredicted RBP17.04■□□□□ 0.32
NIP7-206ENST00000565034 TMOD2Q9NZR1 351 aa17.04■□□□□ 0.32
NIP7-206ENST00000565034 ATRNL1Q5VV63 1379 aa17.03■□□□□ 0.32
NIP7-206ENST00000565034 FIBPO43427 364 aa17.03■□□□□ 0.32
NIP7-206ENST00000565034 NOVP48745 357 aa17.03■□□□□ 0.32
NIP7-206ENST00000565034 GNAQP50148 359 aa17.03■□□□□ 0.32
NIP7-206ENST00000565034 FOSBP53539 338 aa17.03■□□□□ 0.32
NIP7-206ENST00000565034 UBE2HP62256 183 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms