RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 DDAH1O94760 285 aa22.8■■□□□ 1.24
CLN6-205ENST00000564846 PICALMQ13492 652 aa22.8■■□□□ 1.24
CLN6-205ENST00000564846 DGKHQ86XP1 1220 aa22.8■■□□□ 1.24
CLN6-205ENST00000564846 NUP133Q8WUM0 1156 aa22.8■■□□□ 1.24
CLN6-205ENST00000564846 TCP11L1Q9NUJ3 509 aa22.8■■□□□ 1.24
CLN6-205ENST00000564846 NCLP19338 710 aaKnown RBP22.79■■□□□ 1.24
CLN6-205ENST00000564846 KRT85P78386 507 aa22.79■■□□□ 1.24
CLN6-205ENST00000564846 USP48Q86UV5 1035 aa22.79■■□□□ 1.24
CLN6-205ENST00000564846 MBD3O95983 291 aa22.78■■□□□ 1.24
CLN6-205ENST00000564846 TSPY3P0CV98 308 aa22.78■■□□□ 1.24
CLN6-205ENST00000564846 TSPY8P0CW00 308 aa22.78■■□□□ 1.24
CLN6-205ENST00000564846 CDK8P49336 464 aa22.78■■□□□ 1.24
CLN6-205ENST00000564846 SSRP1Q08945 709 aaKnown RBP22.78■■□□□ 1.24
CLN6-205ENST00000564846 FBXO18Q8NFZ0 1043 aa22.78■■□□□ 1.24
CLN6-205ENST00000564846 ANKS1AQ92625 1134 aa22.78■■□□□ 1.24
CLN6-205ENST00000564846 RBM28Q9NW13 759 aaKnown RBP22.78■■□□□ 1.24
CLN6-205ENST00000564846 FMNL1O95466 1100 aaPredicted RBP22.78■■□□□ 1.24
CLN6-205ENST00000564846 RASA1P20936 1047 aa22.78■■□□□ 1.24
CLN6-205ENST00000564846 TROAPQ12815 778 aa22.78■■□□□ 1.24
CLN6-205ENST00000564846 SLC44A5Q8NCS7 719 aa22.78■■□□□ 1.24
CLN6-205ENST00000564846 WASF1Q92558 559 aa22.78■■□□□ 1.24
CLN6-205ENST00000564846 PHKBQ93100 1093 aa22.78■■□□□ 1.24
CLN6-205ENST00000564846 OSBPL5Q9H0X9 879 aaPredicted RBP22.78■■□□□ 1.24
CLN6-205ENST00000564846 GDPD2Q9HCC8 539 aa22.78■■□□□ 1.24
CLN6-205ENST00000564846 DDX4Q9NQI0 724 aaKnown RBP22.78■■□□□ 1.24
CLN6-205ENST00000564846 PPP1R1BQ9UD71 204 aaPredicted RBP22.78■■□□□ 1.24
CLN6-205ENST00000564846 NMT2O60551 498 aa22.77■■□□□ 1.24
CLN6-205ENST00000564846 RBM5P52756 815 aaKnown RBP eCLIP22.77■■□□□ 1.24
CLN6-205ENST00000564846 RSBN1LQ6PCB5 846 aaPredicted RBP22.77■■□□□ 1.24
CLN6-205ENST00000564846 TRIM22Q8IYM9 498 aa22.77■■□□□ 1.24
CLN6-205ENST00000564846 MYH1P12882 1939 aa22.77■■□□□ 1.23
CLN6-205ENST00000564846 VIL1P09327 827 aaKnown RBP22.76■■□□□ 1.23
CLN6-205ENST00000564846 FOSBP53539 338 aa22.76■■□□□ 1.23
CLN6-205ENST00000564846 NIM1KQ8IY84 436 aa22.76■■□□□ 1.23
CLN6-205ENST00000564846 ALG1Q9BT22 464 aa22.76■■□□□ 1.23
CLN6-205ENST00000564846 ZNRF3Q9ULT6 936 aa22.76■■□□□ 1.23
CLN6-205ENST00000564846 FIBPO43427 364 aa22.76■■□□□ 1.23
CLN6-205ENST00000564846 NPM3O75607 178 aaKnown RBP22.76■■□□□ 1.23
CLN6-205ENST00000564846 RCSD1Q6JBY9 416 aa22.76■■□□□ 1.23
CLN6-205ENST00000564846 GPT2Q8TD30 523 aa22.76■■□□□ 1.23
CLN6-205ENST00000564846 IDI2Q9BXS1 227 aa22.76■■□□□ 1.23
CLN6-205ENST00000564846 SLC26A6Q9BXS9 759 aa22.76■■□□□ 1.23
CLN6-205ENST00000564846 GZF1Q9H116 711 aaPredicted RBP22.76■■□□□ 1.23
CLN6-205ENST00000564846 TAOK3Q9H2K8 898 aa22.76■■□□□ 1.23
CLN6-205ENST00000564846 IL17RBQ9NRM6 502 aa22.76■■□□□ 1.23
CLN6-205ENST00000564846 PSME4Q14997 1843 aa22.75■■□□□ 1.23
CLN6-205ENST00000564846 ADAMTSL1Q8N6G6 1762 aa22.75■■□□□ 1.23
CLN6-205ENST00000564846 PTGER2P43116 358 aa22.75■■□□□ 1.23
CLN6-205ENST00000564846 GUCY1B3Q02153 619 aa22.75■■□□□ 1.23
CLN6-205ENST00000564846 GABPAQ06546 454 aa22.75■■□□□ 1.23
CLN6-205ENST00000564846 NBPF11Q86T75 865 aa22.75■■□□□ 1.23
CLN6-205ENST00000564846 CRACR2BQ8N4Y2 399 aaPredicted RBP22.75■■□□□ 1.23
CLN6-205ENST00000564846 SCAND2PQ9GZW5 306 aaPredicted RBP22.75■■□□□ 1.23
CLN6-205ENST00000564846 KAT14Q9H8E8 782 aa22.75■■□□□ 1.23
CLN6-205ENST00000564846 SWAP70Q9UH65 585 aa22.75■■□□□ 1.23
CLN6-205ENST00000564846 PSDA5PKW4 1024 aaPredicted RBP22.74■■□□□ 1.23
CLN6-205ENST00000564846 HLA-DOAP06340 250 aa22.74■■□□□ 1.23
CLN6-205ENST00000564846 FAM173BQ6P4H8 233 aa22.74■■□□□ 1.23
CLN6-205ENST00000564846 NEDD1Q8NHV4 660 aa22.74■■□□□ 1.23
CLN6-205ENST00000564846 BRCA1P38398 1863 aaKnown RBP22.74■■□□□ 1.23
CLN6-205ENST00000564846 PSMD14O00487 310 aa22.73■■□□□ 1.23
CLN6-205ENST00000564846 RAD17O75943 681 aa22.73■■□□□ 1.23
CLN6-205ENST00000564846 ATL3Q6DD88 541 aa22.73■■□□□ 1.23
CLN6-205ENST00000564846 CTCFLQ8NI51 663 aaPredicted RBP22.73■■□□□ 1.23
CLN6-205ENST00000564846 MAP3K14Q99558 947 aa22.73■■□□□ 1.23
CLN6-205ENST00000564846 DHX36Q9H2U1 1008 aaKnown RBP22.73■■□□□ 1.23
CLN6-205ENST00000564846 CFAP45Q9UL16 551 aa22.73■■□□□ 1.23
CLN6-205ENST00000564846 DEXIO95424 95 aa22.73■■□□□ 1.23
CLN6-205ENST00000564846 UBE2HP62256 183 aa22.73■■□□□ 1.23
CLN6-205ENST00000564846 NFIAQ12857 509 aa22.73■■□□□ 1.23
CLN6-205ENST00000564846 CFAP100Q494V2 611 aa22.73■■□□□ 1.23
CLN6-205ENST00000564846 KLHL34Q8N239 644 aa22.73■■□□□ 1.23
CLN6-205ENST00000564846 RNF26Q9BY78 433 aaPredicted RBP22.73■■□□□ 1.23
CLN6-205ENST00000564846 SERPINB13Q9UIV8 391 aa22.73■■□□□ 1.23
CLN6-205ENST00000564846 HDAC9Q9UKV0 1011 aa22.73■■□□□ 1.23
CLN6-205ENST00000564846 TAOK2Q9UL54 1235 aa22.73■■□□□ 1.23
CLN6-205ENST00000564846 ELP1O95163 1332 aa22.73■■□□□ 1.23
CLN6-205ENST00000564846 COL4A5P29400 1685 aa22.72■■□□□ 1.23
CLN6-205ENST00000564846 TRIM29Q14134 588 aa22.72■■□□□ 1.23
CLN6-205ENST00000564846 GMLQ99445 158 aa22.72■■□□□ 1.23
CLN6-205ENST00000564846 EHD4Q9H223 541 aa22.72■■□□□ 1.23
CLN6-205ENST00000564846 KIF5BP33176 963 aa22.71■■□□□ 1.23
CLN6-205ENST00000564846 TCHHQ07283 1943 aa22.71■■□□□ 1.23
CLN6-205ENST00000564846 ECM29Q5VYK3 1845 aa22.71■■□□□ 1.23
CLN6-205ENST00000564846 OTUD7BQ6GQQ9 843 aa22.71■■□□□ 1.23
CLN6-205ENST00000564846 PCDHAC2Q9Y5I4 1007 aa22.71■■□□□ 1.23
CLN6-205ENST00000564846 GADD45BO75293 160 aaPredicted RBP22.71■■□□□ 1.23
CLN6-205ENST00000564846 TMTC3Q6ZXV5 915 aa22.71■■□□□ 1.23
CLN6-205ENST00000564846 BRAPQ7Z569 592 aa22.71■■□□□ 1.23
CLN6-205ENST00000564846 OGFOD1Q8N543 542 aa22.71■■□□□ 1.23
CLN6-205ENST00000564846 PNMA1Q8ND90 353 aa22.71■■□□□ 1.23
CLN6-205ENST00000564846 ZNF396Q96N95 335 aaPredicted RBP22.71■■□□□ 1.23
CLN6-205ENST00000564846 AIFM3Q96NN9 605 aa22.71■■□□□ 1.23
CLN6-205ENST00000564846 PLIN4Q96Q06 1357 aa22.7■■□□□ 1.22
CLN6-205ENST00000564846 AKAP17AQ02040 695 aaKnown RBP22.7■■□□□ 1.22
CLN6-205ENST00000564846 FUT2Q10981 343 aa22.7■■□□□ 1.22
CLN6-205ENST00000564846 KRT40Q6A162 431 aa22.7■■□□□ 1.22
CLN6-205ENST00000564846 CAVIN1Q6NZI2 390 aaKnown RBP22.7■■□□□ 1.22
CLN6-205ENST00000564846 AGBL3Q8NEM8 1001 aa22.7■■□□□ 1.22
CLN6-205ENST00000564846 JDP2Q8WYK2 163 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms